Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0022400 Salix brachista HOM05D000072 ORTHO05D000026 7.9e-108 393.7 183 100.0
Sabra17G0021500 Salix brachista HOM05D000072 ORTHO05D000026 2.1e-47 193.0 112 82.1
Sabra17G0021900 Salix brachista HOM05D000072 ORTHO05D000026 1.3e-38 163.7 104 78.8
Potri.007G126100 Populus trichocarpa HOM05D000072 ORTHO05D000026 5.3e-27 125.2 157 43.9
Potri.007G125450 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.0e-26 123.2 157 41.4
Sabra07G0101000 Salix brachista HOM05D005069 ORTHO05D006024 1.3e-25 120.6 157 42.0
Sabra07G0101400 Salix brachista HOM05D000072 ORTHO05D000026 2.9e-25 119.4 156 42.3
Potri.007G125000 Populus trichocarpa HOM05D000072 ORTHO05D000026 4.9e-25 118.6 149 44.3
Manes.04G046100 Manihot esculenta HOM05D000072 ORTHO05D000026 6.4e-25 118.2 148 45.3
Potri.007G125800 Populus trichocarpa HOM05D000072 ORTHO05D000026 6.4e-25 118.2 119 50.4
Sabra07G0101200 Salix brachista HOM05D000072 ORTHO05D000026 1.9e-24 116.7 142 42.3
Manes.04G045516 Manihot esculenta HOM05D000072 ORTHO05D000026 1.6e-23 113.6 149 43.0
Potri.007G125200 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.3e-22 110.5 108 49.1
Manes.04G046300 Manihot esculenta HOM05D000072 ORTHO05D000026 3.9e-22 109.0 149 41.6
Manes.04G045000 Manihot esculenta HOM05D000072 ORTHO05D000026 9.6e-21 104.4 113 47.8
Manes.04G046101 Manihot esculenta HOM05D000072 ORTHO05D000026 9.6e-21 104.4 148 42.6
Sabra07G0101500 Salix brachista HOM05D000072 ORTHO05D000026 9.6e-21 104.4 113 49.6
Manes.04G045401 Manihot esculenta HOM05D000072 ORTHO05D000026 1.6e-20 103.6 111 50.5
Sabra07G0101900 Salix brachista HOM05D000072 ORTHO05D000026 1.1e-19 100.9 108 48.1
Manes.04G046700 Manihot esculenta HOM05D000072 ORTHO05D000026 4.0e-19 99.0 114 49.1
Sabra07G0100900 Salix brachista HOM05D010229 ORTHO05D012533 1.2e-18 97.4 136 42.6
Prupe.2G047500 Prunus persica HOM05D000072 ORTHO05D000026 4.5e-18 95.5 143 36.4
Sabra07G0101600 Salix brachista HOM05D000072 ORTHO05D000026 2.2e-17 93.2 85 57.6
Manes.11G116600 Manihot esculenta HOM05D000072 ORTHO05D000026 7.1e-16 88.2 146 32.9
QL09p010030 Quercus lobata HOM05D000072 ORTHO05D000026 9.3e-16 87.8 185 35.1
QL09p009750 Quercus lobata HOM05D000072 ORTHO05D000026 1.2e-15 87.4 185 35.1
QL09p009834 Quercus lobata HOM05D000072 ORTHO05D000026 2.1e-15 86.7 119 41.2
CANSAT21G0028 Cannabis sativa HOM05D000072 ORTHO05D000026 2.7e-15 86.3 176 33.5
Manes.14G007108 Manihot esculenta HOM05D000072 ORTHO05D000026 4.6e-15 85.5 145 36.6
Sabra07G0102100 Salix brachista HOM05D000072 ORTHO05D000026 6.0e-15 85.1 88 51.1
Oeu041323.1 Olea europaea HOM05D000072 ORTHO05D000026 1.0e-14 84.3 148 32.4
QL09p010161 Quercus lobata HOM05D000072 ORTHO05D000026 2.3e-14 83.2 186 34.4
Prupe.2G048700 Prunus persica HOM05D000072 ORTHO05D000026 5.1e-14 82.0 111 44.1
QL09p009937 Quercus lobata HOM05D000072 ORTHO05D000026 6.7e-14 81.6 122 40.2
Potri.015G018600 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.5e-13 80.5 148 37.8
QL01p008121 Quercus lobata HOM05D000072 ORTHO05D000026 1.5e-13 80.5 181 30.9
RcHm_v2.0_Chr1g0328281 Rosa chinensis HOM05D000072 ORTHO05D000026 1.5e-13 80.5 146 37.7
MD02G1273500 Malus domestica HOM05D000072 ORTHO05D000026 3.3e-13 79.3 106 44.3
Manes.11G116800 Manihot esculenta HOM05D000072 ORTHO05D000026 3.3e-13 79.3 120 34.2
QL09p010111 Quercus lobata HOM05D000072 ORTHO05D000026 1.6e-12 77.0 124 37.1
QL09p009971 Quercus lobata HOM05D000072 ORTHO05D000026 4.8e-12 75.5 184 30.4
Medtr1g028280 Medicago truncatula HOM05D000072 ORTHO05D000026 1.1e-11 74.3 99 37.4
Haze_10143 Corylus avellana HOM05D000072 ORTHO05D000026 1.8e-11 73.6 120 36.7
RcHm_v2.0_Chr1g0328221 Rosa chinensis HOM05D000072 ORTHO05D000026 1.8e-11 73.6 157 34.4
FvH4_7g04150 Fragaria vesca HOM05D000072 ORTHO05D000026 3.1e-11 72.8 156 32.7
Psat6g038800 Pisum sativum HOM05D000072 ORTHO05D000026 5.3e-11 72.0 95 38.9
RcHm_v2.0_Chr1g0328501 Rosa chinensis HOM05D000072 ORTHO05D000026 5.3e-11 72.0 134 37.3
Oeu041335.2 Olea europaea HOM05D000072 ORTHO05D000026 6.9e-11 71.6 107 33.6
TPR.G33344 Trifolium pratense HOM05D000072 ORTHO05D000026 9.0e-11 71.2 100 33.0
CANSAT21G1543 Cannabis sativa HOM05D000072 ORTHO05D000026 1.2e-10 70.9 123 35.0
MD02G1274000 Malus domestica HOM05D000072 ORTHO05D000026 1.2e-10 70.9 120 35.0
Dinv05653 Davidia involucrata HOM05D000072 ORTHO05D000026 1.5e-10 70.5 122 32.0
Prupe.2G103300 Prunus persica HOM05D000072 ORTHO05D000026 2.0e-10 70.1 118 37.3
Sabra15G0014000 Salix brachista HOM05D000072 ORTHO05D000026 4.5e-10 68.9 103 39.8
Cfa021379 Carpinus fangiana HOM05D000072 ORTHO05D000026 5.9e-10 68.6 173 31.8
Manes.06G158900 Manihot esculenta HOM05D000072 ORTHO05D000026 1.0e-09 67.8 121 31.4
Lj5C554T7 Lonicera japonica HOM05D000072 ORTHO05D000026 1.7e-09 67.0 90 41.1
Dinv05646 Davidia involucrata HOM05D000072 ORTHO05D000026 2.9e-09 66.2 116 33.6
Oeu060619.2 Olea europaea HOM05D000072 ORTHO05D000026 2.9e-09 66.2 105 33.3
QL12p039529 Quercus lobata HOM05D000072 ORTHO05D000026 2.9e-09 66.2 104 33.7
Manes.11G117100 Manihot esculenta HOM05D000072 ORTHO05D000026 6.5e-09 65.1 157 34.4
Prupe.2G103900 Prunus persica HOM05D000072 ORTHO05D000026 6.5e-09 65.1 160 33.8
Rhsim06G0112200 Rhododendron simsii HOM05D000072 ORTHO05D000026 6.5e-09 65.1 156 33.3
MSTRG.8670 Avicennia marina HOM05D000072 ORTHO05D000026 8.5e-09 64.7 113 33.6
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.5e-09 64.7 154 33.1
Oeu022475.1 Olea europaea HOM05D000072 ORTHO05D000026 1.1e-08 64.3 118 31.4
Potri.017G009500 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.9e-08 63.5 122 36.9
SalBow4G0973 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.9e-08 63.5 102 33.3
SalBow4G3098 Salvia bowleyana HOM05D000072 ORTHO05D000026 1.9e-08 63.5 102 33.3
Migut.E01622 Erythranthe guttata HOM05D000072 ORTHO05D000026 2.5e-08 63.2 138 30.4
Migut.E01750 Erythranthe guttata HOM05D000072 ORTHO05D000026 2.5e-08 63.2 138 30.4
Migut.E01763 Erythranthe guttata HOM05D000072 ORTHO05D000026 2.5e-08 63.2 138 30.4
Potri.017G009400 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.5e-08 63.2 95 37.9
QL09p009890 Quercus lobata HOM05D000072 ORTHO05D000026 3.2e-08 62.8 130 35.4
Potri.017G008901 Populus trichocarpa HOM05D000072 ORTHO05D000026 4.2e-08 62.4 100 38.0
Cfa016395 Carpinus fangiana HOM05D000072 ORTHO05D000026 5.5e-08 62.0 159 32.7
FvH4_6g28430 Fragaria vesca HOM05D000072 ORTHO05D000026 5.5e-08 62.0 168 28.6
Manes.11G117300 Manihot esculenta HOM05D000072 ORTHO05D000026 5.5e-08 62.0 115 33.9
Potri.017G007900 Populus trichocarpa HOM05D000072 ORTHO05D000026 5.5e-08 62.0 120 32.5
Dinv05650 Davidia involucrata HOM05D000072 ORTHO05D000026 7.2e-08 61.6 144 31.2
Manes.18G105616 Manihot esculenta HOM05D000072 ORTHO05D000026 7.2e-08 61.6 117 31.6
TWI63G1471 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 7.2e-08 61.6 116 33.6
Haze_08154 Corylus avellana HOM05D000072 ORTHO05D000026 9.4e-08 61.2 153 31.4
arahy.Tifrunner.gnm1.ann1.DY953T Arachis hypogaea HOM05D000072 ORTHO05D000026 1.2e-07 60.8 157 33.8
arahy.Tifrunner.gnm1.ann1.KA4ME6 Arachis hypogaea HOM05D000072 ORTHO05D000026 1.2e-07 60.8 157 33.8
FAN05G5605 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.2e-07 60.8 156 28.8
Cfa016396 Carpinus fangiana HOM05D000072 ORTHO05D000026 1.6e-07 60.5 155 27.7
Nitab4.5_0026540g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.6e-07 60.5 106 33.0
Rhsim10G0165500 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.6e-07 60.5 119 32.8
Haze_00169 Corylus avellana HOM05D000072 ORTHO05D000026 2.1e-07 60.1 152 30.3
DCAR_007990 Daucus carota HOM05D000072 ORTHO05D000026 2.1e-07 60.1 121 31.4
MD02G1249700 Malus domestica HOM05D000072 ORTHO05D000026 2.1e-07 60.1 160 30.6
Potri.017G008800 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.1e-07 60.1 170 27.1
Cfa016399 Carpinus fangiana HOM05D000072 ORTHO05D000026 2.7e-07 59.7 157 28.0
Cc00_g00500 Coffea canephora HOM05D000072 ORTHO05D000026 2.7e-07 59.7 98 42.9
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.7e-07 59.7 158 31.0
RcHm_v2.0_Chr1g0328371 Rosa chinensis HOM05D000072 ORTHO05D000026 2.7e-07 59.7 89 40.4
Cc00_g00560 Coffea canephora HOM05D000072 ORTHO05D000026 3.6e-07 59.3 91 44.0
FvH4_6g23830 Fragaria vesca HOM05D000072 ORTHO05D000026 3.6e-07 59.3 155 28.4
FAN17G2380 Fragaria x ananassa HOM05D000109 ORTHO05D000026 3.6e-07 59.3 119 35.3
Potri.017G008600 Populus trichocarpa HOM05D000072 ORTHO05D000026 3.6e-07 59.3 119 32.8
TAR629G0877 Trochodendron aralioides HOM05D000072 ORTHO05D000026 3.6e-07 59.3 109 36.7
Prupe.2G087800 Prunus persica HOM05D000072 ORTHO05D000026 4.6e-07 58.9 103 37.9
Rhsim06G0112500 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.6e-07 58.9 109 32.1
FvH4_6g52670 Fragaria vesca HOM05D000072 ORTHO05D000026 6.1e-07 58.5 132 34.1
FAN13G0921 Fragaria x ananassa HOM05D000072 ORTHO05D011996 6.1e-07 58.5 119 35.3
FAN14G3964 Fragaria x ananassa HOM05D000072 ORTHO05D011996 6.1e-07 58.5 119 35.3
Rhsim03G0206700 Rhododendron simsii HOM05D000072 ORTHO05D000026 6.1e-07 58.5 110 32.7
FAN14G0319 Fragaria x ananassa HOM05D000072 ORTHO05D000026 7.9e-07 58.2 167 25.7
Manes.04G075400 Manihot esculenta HOM05D000072 ORTHO05D000026 7.9e-07 58.2 114 34.2
Migut.E00899 Erythranthe guttata HOM05D000072 ORTHO05D000026 1.0e-06 57.8 167 26.9
Migut.E01760 Erythranthe guttata HOM05D000072 ORTHO05D000026 1.0e-06 57.8 116 34.5
Medtr3g028640 Medicago truncatula HOM05D000072 ORTHO05D000026 1.0e-06 57.8 149 29.5
Potri.017G009600 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.0e-06 57.8 132 29.5
Rhsim06G0111300 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.0e-06 57.8 135 29.6
RcHm_v2.0_Chr1g0328591 Rosa chinensis HOM05D000072 ORTHO05D000026 1.0e-06 57.8 91 39.6
TWI75G0666 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 1.0e-06 57.8 95 36.8
FvH4_7g04160 Fragaria vesca HOM05D000072 ORTHO05D000026 1.4e-06 57.4 134 34.3
FAN22G1936 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.4e-06 57.4 111 29.7
FAN18G1458 Fragaria x ananassa HOM05D000072 ORTHO05D011996 1.8e-06 57.0 119 34.5
Potri.017G009100 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.8e-06 57.0 121 30.6
Rhsim06G0120100 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.8e-06 57.0 113 30.1
TAR375G0126 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.8e-06 57.0 100 33.0
Nitab4.5_0005600g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 2.3e-06 56.6 104 32.7
Peaxi162Scf00550g00421 Petunia axillaris HOM05D000072 ORTHO05D000026 2.3e-06 56.6 131 32.1
TAR629G2854 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.3e-06 56.6 100 32.0
RcHm_v2.0_Chr1g0333331 Rosa chinensis HOM05D000072 ORTHO05D000026 3.0e-06 56.2 124 33.9
MD02G1247300 Malus domestica HOM05D000072 ORTHO05D000026 3.9e-06 55.8 150 32.7
Prupe.2G087100 Prunus persica HOM05D000072 ORTHO05D000026 3.9e-06 55.8 99 40.4
arahy.Tifrunner.gnm1.ann1.CYE9F3 Arachis hypogaea HOM05D000072 ORTHO05D000026 5.1e-06 55.5 161 30.4
arahy.Tifrunner.gnm1.ann1.H4EH7V Arachis hypogaea HOM05D000072 ORTHO05D000026 5.1e-06 55.5 161 30.4
Migut.E01747 Erythranthe guttata HOM05D000072 ORTHO05D000026 5.1e-06 55.5 113 33.6
Lj1g0010682 Lotus japonicus HOM05D000072 ORTHO05D000026 5.1e-06 55.5 116 35.3
Thecc.03G195000 Theobroma cacao HOM05D000072 ORTHO05D000026 5.1e-06 55.5 136 32.4
CANSAT11G1462 Cannabis sativa HOM05D000072 ORTHO05D000026 6.7e-06 55.1 133 29.3
DCAR_007992 Daucus carota HOM05D000072 ORTHO05D000026 6.7e-06 55.1 103 30.1
MD02G1249300 Malus domestica HOM05D000072 ORTHO05D000026 6.7e-06 55.1 110 34.5
Actinidia34207 Actinidia chinensis HOM05D000072 ORTHO05D000026 8.8e-06 54.7 96 32.3
CANSAT21G0063 Cannabis sativa HOM05D000072 ORTHO05D000026 8.8e-06 54.7 110 28.2
Cfa012509 Carpinus fangiana HOM05D000072 ORTHO05D000026 8.8e-06 54.7 158 32.9
FvH4_7g04170 Fragaria vesca HOM05D000072 ORTHO05D000026 8.8e-06 54.7 152 32.9
FAN03G2036 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.8e-06 54.7 130 32.3
FAN10G3149 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.8e-06 54.7 117 30.8


User provided reference genes

Program Settings