Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 1.1e-215 753.1 380 100.0
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 2.3e-210 735.3 380 96.8
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 4.4e-201 704.5 382 92.1
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 2.7e-198 695.3 380 91.6
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 8.9e-186 653.7 385 85.7
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 4.9e-184 647.9 383 84.6
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 2.4e-183 645.6 382 83.8
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 3.1e-183 645.2 381 83.2
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 3.1e-183 645.2 380 83.9
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 4.1e-183 644.8 378 84.1
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 3.5e-182 641.7 381 82.2
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 1.0e-181 640.2 383 81.7
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 1.0e-181 640.2 383 81.7
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 1.0e-181 640.2 378 83.1
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 2.3e-181 639.0 380 82.6
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 2.3e-181 639.0 380 83.7
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 1.5e-180 636.3 376 83.2
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 1.9e-180 636.0 385 81.6
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.5e-180 635.6 387 82.2
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 5.6e-180 634.4 386 81.6
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 7.3e-180 634.0 378 82.5
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 9.5e-180 633.6 383 80.7
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 1.6e-179 632.9 385 81.6
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 2.1e-179 632.5 368 84.0
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 3.6e-179 631.7 385 80.3
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 4.7e-179 631.3 381 81.4
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 4.7e-179 631.3 377 81.4
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 1.0e-178 630.2 381 82.9
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 1.8e-178 629.4 359 85.0
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 3.0e-178 628.6 377 80.9
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 3.0e-178 628.6 385 80.5
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 4.0e-178 628.2 384 81.8
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 4.0e-178 628.2 384 81.8
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 5.2e-178 627.9 379 81.3
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 5.2e-178 627.9 377 80.9
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 6.8e-178 627.5 359 85.0
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 1.2e-177 626.7 378 80.2
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 1.2e-177 626.7 378 81.5
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 1.5e-177 626.3 382 80.1
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 2.0e-177 625.9 380 80.3
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 2.0e-177 625.9 377 80.4
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 2.0e-177 625.9 381 80.6
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 3.4e-177 625.2 380 81.3
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 7.5e-177 624.0 359 84.1
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 9.8e-177 623.6 377 79.8
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 1.3e-176 623.2 378 80.2
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 2.9e-176 622.1 382 80.4
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 2.9e-176 622.1 382 80.4
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 2.9e-176 622.1 395 78.7
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 4.9e-176 621.3 379 81.0
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 1.1e-175 620.2 414 76.3
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.1e-175 620.2 396 78.8
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 1.1e-175 620.2 379 79.9
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 1.4e-175 619.8 372 81.7
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 2.4e-175 619.0 379 80.7
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 3.2e-175 618.6 380 82.1
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 5.4e-175 617.8 386 81.1
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 5.4e-175 617.8 355 83.7
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 9.2e-175 617.1 364 82.7
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 1.6e-174 616.3 376 79.8
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 1.6e-174 616.3 379 79.4
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 2.0e-174 615.9 351 83.8
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 4.6e-174 614.8 398 76.9
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 2.3e-173 612.5 365 80.8
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 2.3e-173 612.5 365 80.8
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 2.3e-173 612.5 365 81.1
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 8.6e-173 610.5 380 79.5
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 8.6e-173 610.5 379 78.9
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 2.5e-172 609.0 381 79.3
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 2.5e-172 609.0 377 80.4
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 4.3e-172 608.2 365 80.0
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 4.3e-172 608.2 380 79.5
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 7.3e-172 607.4 372 79.8
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 9.5e-172 607.1 380 78.9
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 9.5e-172 607.1 378 79.1
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 1.2e-171 606.7 356 83.7
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.6e-171 606.3 365 80.3
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 2.8e-171 605.5 383 79.4
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 6.2e-171 604.4 380 80.5
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 1.1e-170 603.6 384 77.9
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 1.1e-170 603.6 361 81.4
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 1.4e-170 603.2 380 78.9
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 1.8e-170 602.8 363 81.5
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 4.0e-170 601.7 379 77.8
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 6.8e-170 600.9 362 81.5
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 8.9e-170 600.5 365 80.5
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 8.9e-170 600.5 352 83.2
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 2.0e-169 599.4 385 76.9
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 1.3e-168 596.7 358 82.4
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 1.2e-166 590.1 351 82.1
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.2e-166 590.1 381 78.2
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 8.6e-165 583.9 383 77.0
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 7.3e-164 580.9 363 77.7
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.4e-162 576.6 387 76.2
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 5.8e-161 571.2 357 77.3
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 1.2e-158 563.5 374 74.1
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 2.1e-158 562.8 342 78.9
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 1.3e-157 560.1 395 71.9
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 8.6e-157 557.4 380 76.8
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 3.3e-156 555.4 315 85.7
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 3.3e-156 555.4 355 74.9
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 2.2e-152 542.7 386 72.0
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 1.9e-151 539.7 385 71.4
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 1.6e-147 526.6 315 78.4
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 1.7e-141 506.5 347 69.2
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.8e-139 499.2 353 72.2
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 1.3e-133 480.3 277 83.0
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 5.1e-133 478.4 266 88.7
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 2.1e-123 446.4 286 76.2
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 2.1e-123 446.4 253 83.0
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 1.5e-121 440.3 249 84.7
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 1.1e-114 417.5 304 70.7
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 3.9e-109 399.1 217 91.2
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 6.3e-107 391.7 313 61.7
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 1.4e-106 390.6 313 61.3
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 2.6e-100 369.8 202 90.6
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 1.7e-96 357.1 213 82.6
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 8.5e-96 354.8 200 80.0
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 1.0e-77 294.7 298 49.7
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 4.1e-74 282.7 234 61.1
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.7e-56 224.2 121 89.3
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 1.2e-52 211.5 136 70.6
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 2.2e-51 207.2 202 57.4
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 6.4e-43 179.1 97 82.5
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 1.1e-39 168.3 104 76.9
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 1.0e-32 145.2 99 75.8
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 1.3e-32 144.8 100 77.0
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 8.4e-27 125.6 84 75.0
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.4e-26 124.8 82 78.0
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 5.4e-26 122.9 77 79.2
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 1.1e-23 115.2 60 86.7
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 2.6e-20 104.0 74 68.9
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 7.6e-20 102.4 68 75.0
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 8.4e-19 99.0 124 50.0


User provided reference genes

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