Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 5.5e-44 180.6 96 100.0
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 5.5e-44 180.6 96 100.0
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 2.1e-43 178.7 96 99.0
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 8.0e-43 176.8 96 97.9
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 1.6e-35 152.5 88 92.0
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.0e-34 149.8 88 89.8
Sabra11G0012500 Salix brachista HOM05D005411 ORTHO05D006463 3.4e-33 144.8 79 96.2
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 9.8e-33 143.3 82 91.5
Sabra05G0164800 Salix brachista HOM05D005411 ORTHO05D006463 4.9e-32 141.0 79 93.7
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.1e-26 123.2 87 73.6
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 3.1e-18 95.1 97 56.7
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 9.9e-17 90.1 96 54.2
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.7e-16 88.2 92 54.3
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 4.1e-15 84.7 92 52.2
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 7.1e-15 84.0 88 55.7
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.1e-14 82.4 92 51.1
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 2.7e-14 82.0 92 57.6
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 3.5e-14 81.6 79 55.7
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 4.6e-14 81.3 83 56.6
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 6.0e-14 80.9 93 52.7
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 6.0e-14 80.9 91 50.5
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 7.8e-14 80.5 96 51.0
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.3e-13 79.7 96 51.0
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 1.7e-13 79.3 87 50.6
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 1.9e-12 75.9 87 50.6
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.9e-12 75.9 96 49.0
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 2.5e-12 75.5 88 47.7
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 5.6e-12 74.3 77 54.5
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 1.2e-11 73.2 89 49.4
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 1.2e-11 73.2 77 53.2
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 2.1e-11 72.4 96 46.9
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 2.8e-11 72.0 50 72.0
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.8e-11 72.0 50 72.0
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 8.1e-11 70.5 61 60.7
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 8.1e-11 70.5 87 48.3
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 1.1e-10 70.1 80 52.5
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.8e-10 69.3 89 48.3
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 2.4e-10 68.9 61 59.0
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 4.0e-10 68.2 89 47.2
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 4.0e-10 68.2 93 47.3
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 4.0e-10 68.2 72 52.8
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 5.2e-10 67.8 54 66.7
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 5.2e-10 67.8 54 66.7
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 5.2e-10 67.8 89 46.1
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 6.8e-10 67.4 99 44.4
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 8.9e-10 67.0 47 72.3
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 8.9e-10 67.0 92 41.3
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 1.2e-09 66.6 84 45.2
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.2e-09 66.6 46 69.6
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 1.2e-09 66.6 47 72.3
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 1.5e-09 66.2 51 64.7
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 1.5e-09 66.2 45 71.1
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 2.0e-09 65.9 89 51.7
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 2.0e-09 65.9 48 66.7
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 2.6e-09 65.5 89 44.9
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 2.6e-09 65.5 47 70.2
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 2.6e-09 65.5 47 70.2
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 3.4e-09 65.1 57 57.9
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 3.4e-09 65.1 82 45.1
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 4.4e-09 64.7 45 71.1
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 4.4e-09 64.7 69 53.6
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 5.8e-09 64.3 58 55.2
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 5.8e-09 64.3 94 45.7
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 5.8e-09 64.3 62 56.5
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 7.6e-09 63.9 55 60.0
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 9.9e-09 63.5 82 43.9
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 9.9e-09 63.5 57 56.1
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 9.9e-09 63.5 81 45.7
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 1.3e-08 63.2 75 53.3
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 1.7e-08 62.8 80 47.5
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 2.2e-08 62.4 49 61.2
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 2.2e-08 62.4 49 61.2
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 2.2e-08 62.4 47 63.8
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 2.9e-08 62.0 97 44.3
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 2.9e-08 62.0 44 68.2
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 3.8e-08 61.6 79 49.4
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 3.8e-08 61.6 96 41.7
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 3.8e-08 61.6 55 61.8
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 3.8e-08 61.6 50 62.0
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 4.9e-08 61.2 48 64.6
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 4.9e-08 61.2 75 49.3
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 4.9e-08 61.2 83 47.0
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 4.9e-08 61.2 83 47.0
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 6.4e-08 60.8 51 60.8
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 6.4e-08 60.8 85 43.5
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 6.4e-08 60.8 51 58.8
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 6.4e-08 60.8 78 41.0
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 8.4e-08 60.5 75 52.0
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 1.1e-07 60.1 78 46.2
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 1.4e-07 59.7 89 43.8
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 1.4e-07 59.7 67 52.2
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.4e-07 59.7 89 43.8
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 1.4e-07 59.7 89 43.8
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 1.4e-07 59.7 45 64.4
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.4e-07 59.7 73 46.6
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 1.9e-07 59.3 53 62.3
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.9e-07 59.3 53 62.3
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 1.9e-07 59.3 53 62.3
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 1.9e-07 59.3 76 47.4
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 2.4e-07 58.9 54 63.0
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 2.4e-07 58.9 70 47.1
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 3.2e-07 58.5 79 46.8
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 3.2e-07 58.5 61 52.5
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 4.2e-07 58.2 70 47.1
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 4.2e-07 58.2 87 44.8
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 5.4e-07 57.8 79 44.3
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 1.2e-06 56.6 54 57.4
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 1.6e-06 56.2 58 51.7
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.6e-06 56.2 88 44.3
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.6e-06 56.2 88 44.3
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 1.6e-06 56.2 42 64.3
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.6e-06 56.2 91 39.6
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.6e-06 56.2 91 39.6
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 2.1e-06 55.8 54 59.3
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 2.1e-06 55.8 54 59.3


User provided reference genes

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