Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra17G0001500 Salix brachista HOM05D001295 ORTHO05D005319 2.1e-48 195.3 94 100.0
Sabra17G0000500 Salix brachista HOM05D001295 ORTHO05D005319 1.2e-38 162.9 86 91.9
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 1.2e-27 126.3 79 78.5
Sabra17G0015200 Salix brachista HOM05D001295 ORTHO05D005319 5.6e-25 117.5 67 86.6
Sabra07G0119200 Salix brachista HOM05D001295 ORTHO05D005319 3.4e-22 108.2 89 65.2
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 1.0e-21 106.7 79 69.6
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 1.4e-15 86.3 89 48.3
Lj3C135G1 Lonicera japonica HOM05D001295 ORTHO05D005319 9.0e-15 83.6 78 51.3
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 4.5e-14 81.3 77 55.8
vmacro00675 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 5.9e-14 80.9 77 51.9
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 5.9e-14 80.9 79 51.9
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 2.2e-13 79.0 81 46.9
Actinidia34573 Actinidia chinensis HOM05D001295 ORTHO05D005319 5.0e-13 77.8 77 54.5
Dinv05087 Davidia involucrata HOM05D001295 ORTHO05D005319 8.5e-13 77.0 76 50.0
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 1.1e-12 76.6 79 46.8
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 2.5e-12 75.5 77 48.1
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 2.5e-12 75.5 77 48.1
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 9.4e-12 73.6 76 47.4
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 2.1e-11 72.4 77 49.4
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 3.6e-11 71.6 77 49.4
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 4.6e-11 71.2 80 47.5
Haze_01445 Corylus avellana HOM05D001295 ORTHO05D005319 4.6e-11 71.2 81 43.2
SalBow5G4879 Salvia bowleyana HOM05D001295 ORTHO05D005319 4.6e-11 71.2 76 46.1
Ciclev10021418m.g Citrus clementina HOM05D001295 ORTHO05D005319 6.1e-11 70.9 83 47.0
CARHR138550 Cardamine hirsuta HOM05D001295 ORTHO05D005319 1.0e-10 70.1 78 43.6
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 1.4e-10 69.7 81 42.0
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 1.4e-10 69.7 85 42.4
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.4e-10 69.7 77 46.8
QL10p051666 Quercus lobata HOM05D001295 ORTHO05D005319 1.4e-10 69.7 79 43.0
A09p42860 Brassica napus HOM05D001295 ORTHO05D005319 1.8e-10 69.3 94 36.2
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 1.8e-10 69.3 77 48.1
C01p44730 Brassica napus HOM05D001295 ORTHO05D005319 2.3e-10 68.9 79 40.5
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 2.3e-10 68.9 83 42.2
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 2.3e-10 68.9 79 41.8
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 2.3e-10 68.9 76 43.4
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 3.0e-10 68.6 76 42.1
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 3.0e-10 68.6 77 46.8
Phvul.005G154600 Phaseolus vulgaris HOM05D001295 ORTHO05D005319 3.0e-10 68.6 81 42.0
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 5.1e-10 67.8 79 43.0
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 5.1e-10 67.8 79 43.0
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 5.1e-10 67.8 77 46.8
Aqoxy5G00377 Aquilegia oxysepala HOM05D001295 ORTHO05D005319 6.7e-10 67.4 79 41.8
AT2G43465 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 6.7e-10 67.4 92 38.0
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 6.7e-10 67.4 77 46.8
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 8.8e-10 67.0 78 46.2
Sabra07G0107500 Salix brachista HOM05D001295 ORTHO05D005319 8.8e-10 67.0 69 46.4
Sabra07G0119300 Salix brachista HOM05D001295 ORTHO05D005319 8.8e-10 67.0 69 46.4
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 8.8e-10 67.0 79 39.2
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.1e-09 66.6 92 37.0
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 1.1e-09 66.6 77 45.5
MSTRG.4291 Avicennia marina HOM05D001295 ORTHO05D005319 1.5e-09 66.2 76 44.7
Migut.G01331 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.5e-09 66.2 76 46.1
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 1.5e-09 66.2 76 40.8
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 2.0e-09 65.9 76 40.8
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 2.0e-09 65.9 77 46.8
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 2.5e-09 65.5 79 40.5
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 2.5e-09 65.5 81 42.0
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 3.3e-09 65.1 78 43.6
PSO017G5265 Papaver somniferum HOM05D001295 ORTHO05D005319 3.3e-09 65.1 70 42.9
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 5.7e-09 64.3 82 45.1
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 5.7e-09 64.3 75 40.0
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 5.7e-09 64.3 79 39.2
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 5.7e-09 64.3 77 42.9
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 5.7e-09 64.3 76 46.1
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 9.7e-09 63.5 79 40.5
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 9.7e-09 63.5 81 40.7
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.3e-08 63.2 85 40.0
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 1.3e-08 63.2 81 39.5
Sabra17G0000100 Salix brachista HOM05D001295 ORTHO05D349200 1.7e-08 62.8 35 85.7
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 1.7e-08 62.8 83 37.3
Ciclev10021666m.g Citrus clementina HOM05D001295 ORTHO05D005319 3.7e-08 61.6 81 43.2
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 3.7e-08 61.6 76 42.1
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 3.7e-08 61.6 75 38.7
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 3.7e-08 61.6 78 42.3
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 3.7e-08 61.6 82 35.4
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 3.7e-08 61.6 83 39.8
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 4.8e-08 61.2 79 43.0
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 4.8e-08 61.2 80 41.2
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 6.3e-08 60.8 75 38.7
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 6.3e-08 60.8 75 38.7
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 8.2e-08 60.5 77 39.0
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 1.1e-07 60.1 76 42.1
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 1.1e-07 60.1 80 40.0
Gohir.D08G098300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.8e-07 59.3 86 40.7
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 2.4e-07 58.9 89 37.1
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 2.4e-07 58.9 76 39.5
Gorai.004G105900 Gossypium raimondii HOM05D001295 ORTHO05D005319 4.1e-07 58.2 86 39.5
TWI15G0408 Tripterygium wilfordii HOM05D001295 ORTHO05D005319 4.1e-07 58.2 87 37.9
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 5.3e-07 57.8 79 36.7
Thecc.04G173200 Theobroma cacao HOM05D001295 ORTHO05D005319 5.3e-07 57.8 80 42.5
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 9.1e-07 57.0 78 37.2
COL.COLO4_21796 Corchorus olitorius HOM05D001295 ORTHO05D005319 1.5e-06 56.2 82 42.7
Eucgr.H00340 Eucalyptus grandis HOM05D001295 ORTHO05D005319 2.0e-06 55.8 82 36.6
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 4.5e-06 54.7 77 37.7


User provided reference genes

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