Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 2.9e-189 665.2 381 100.0
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.1e-167 593.6 376 90.4
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 7.0e-98 361.7 378 54.2
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 3.1e-82 309.7 376 48.9
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 2.0e-81 307.0 383 56.1
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.5e-79 300.8 375 49.1
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 2.1e-78 297.0 372 47.0
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 2.8e-78 296.6 378 49.2
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 4.7e-78 295.8 379 49.1
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 8.0e-78 295.0 376 47.1
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.0e-77 294.7 379 48.5
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 1.5e-76 290.8 375 48.0
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 2.6e-76 290.0 369 46.1
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 3.7e-75 286.2 376 46.5
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.1e-74 284.6 381 53.8
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.1e-74 284.6 379 48.0
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 1.8e-74 283.9 379 45.1
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 2.0e-73 280.4 376 45.5
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 4.5e-73 279.3 376 45.5
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 2.9e-72 276.6 380 45.8
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 3.9e-72 276.2 382 45.8
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 8.6e-72 275.0 382 46.1
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 7.3e-71 271.9 382 45.8
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 1.2e-70 271.2 378 45.5
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 8.9e-69 265.0 351 46.2
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 1.2e-68 264.6 399 43.1
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 9.8e-68 261.5 386 44.3
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.7e-67 260.8 396 44.2
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.2e-65 254.6 378 41.8
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.0e-64 251.5 379 43.8
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 4.3e-63 246.1 239 53.6
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.3e-63 245.4 401 42.9
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 9.5e-63 245.0 196 67.3
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 1.2e-62 244.6 383 41.0
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 4.7e-62 242.7 392 41.1
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 1.4e-61 241.1 375 41.6
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 4.4e-60 236.1 378 42.1
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.5e-60 235.3 222 58.6
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 1.7e-59 234.2 374 40.9
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.9e-59 233.4 171 67.8
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 2.9e-59 233.4 230 54.3
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 1.4e-58 231.1 378 41.0
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 5.4e-58 229.2 190 60.0
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 9.2e-58 228.4 363 40.5
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 9.2e-58 228.4 372 39.5
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 1.6e-57 227.6 376 39.4
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 1.6e-57 227.6 376 39.6
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 3.5e-57 226.5 391 40.4
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 4.6e-57 226.1 201 59.7
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 6.0e-57 225.7 375 39.5
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.0e-56 224.9 214 58.4
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 6.6e-56 222.2 376 38.3
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 1.1e-55 221.5 383 38.9
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 1.1e-55 221.5 197 58.9
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 1.1e-55 221.5 363 40.8
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 1.5e-55 221.1 375 40.8
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 1.9e-55 220.7 239 50.2
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 3.3e-55 219.9 376 38.6
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 1.6e-54 217.6 383 36.8
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 2.1e-54 217.2 164 65.2
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 3.6e-54 216.5 380 37.1
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 6.2e-54 215.7 238 48.3
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 8.1e-54 215.3 377 37.1
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 1.8e-53 214.2 377 37.4
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.3e-53 213.8 397 36.8
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 3.1e-53 213.4 378 36.8
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 3.1e-53 213.4 253 48.2
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 8.9e-53 211.8 243 49.0
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 1.2e-52 211.5 389 37.0
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 1.5e-52 211.1 386 36.8
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.5e-52 211.1 177 61.0
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 2.0e-52 210.7 422 37.4
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.7e-51 206.5 213 51.2
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 4.9e-51 206.1 216 52.3
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 6.4e-51 205.7 220 53.6
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 1.4e-50 204.5 397 36.8
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 2.4e-50 203.8 384 36.5
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 4.1e-50 203.0 380 37.6
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.2e-49 201.4 392 37.2
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 2.7e-49 200.3 194 54.1
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 3.5e-49 199.9 372 35.2
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.5e-49 199.9 216 50.5
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 4.6e-49 199.5 384 35.9
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 6.0e-49 199.1 206 48.5
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.3e-48 198.0 380 36.3
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 1.3e-48 198.0 438 34.7
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.7e-48 197.6 194 53.6
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 3.9e-48 196.4 375 35.7
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 5.1e-48 196.1 203 50.7
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 6.6e-48 195.7 375 36.0
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 1.1e-47 194.9 379 36.4
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 1.5e-47 194.5 234 50.0
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 1.2e-46 191.4 383 35.5
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 1.6e-46 191.0 190 49.5
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 4.7e-46 189.5 340 39.7
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 3.1e-45 186.8 200 48.5
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 5.8e-44 182.6 121 69.4
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.4e-42 177.2 160 59.4
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.6e-38 164.5 285 42.8
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 2.1e-30 137.5 136 44.9
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.8e-29 134.4 247 33.2
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 4.5e-28 129.8 123 47.2
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 3.2e-26 123.6 283 35.0
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 7.4e-23 112.5 213 34.3
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 1.1e-21 108.6 94 51.1
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 2.6e-20 104.0 229 28.8
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 3.7e-14 83.6 255 31.0
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 1.8e-13 81.3 73 50.7
Manes.05G203050 Manihot esculenta HOM05D006765 ORTHO05D008554 6.1e-09 66.2 66 53.0


User provided reference genes

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