Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 3.3e-74 281.6 139 100.0
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 3.4e-50 201.8 136 78.7
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.5e-45 185.7 140 71.4
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 6.0e-39 164.5 165 58.2
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 3.6e-28 128.6 118 61.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 3.4e-26 122.1 122 62.3
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 4.4e-26 121.7 116 59.5
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 2.9e-25 119.0 107 63.6
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 4.1e-24 115.2 119 55.5
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 9.2e-24 114.0 122 55.7
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 3.9e-22 108.6 123 55.3
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 2.8e-20 102.4 142 45.1
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.1e-19 100.5 131 48.1
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 2.4e-19 99.4 118 50.8
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 5.2e-19 98.2 115 50.4
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 8.9e-19 97.4 113 49.6
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 8.9e-19 97.4 137 48.9
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 2.0e-18 96.3 125 49.6
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 2.6e-18 95.9 113 49.6
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 2.6e-18 95.9 126 50.0
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 7.6e-18 94.4 128 47.7
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 7.6e-18 94.4 124 47.6
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.3e-17 93.6 143 47.6
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 3.8e-17 92.0 143 46.9
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.9e-17 91.7 144 47.2
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 6.4e-17 91.3 133 48.9
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 8.4e-17 90.9 117 49.6
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 8.4e-17 90.9 111 52.3
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.1e-16 90.5 117 52.1
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.1e-16 90.5 117 52.1
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 2.4e-16 89.4 128 46.1
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 3.2e-16 89.0 111 54.1
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 7.1e-16 87.8 113 50.4
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.2e-15 87.0 118 51.7
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.6e-15 86.7 117 50.4
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 3.5e-15 85.5 138 44.2
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 1.0e-14 84.0 113 48.7
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 1.3e-14 83.6 121 44.6
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.3e-14 83.6 121 47.9
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.7e-14 83.2 107 45.8
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 1.7e-14 83.2 131 45.0
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 2.3e-14 82.8 120 46.7
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 3.0e-14 82.4 122 50.0
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 3.0e-14 82.4 122 50.0
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 5.1e-14 81.6 113 47.8
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 5.1e-14 81.6 118 41.5
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 6.6e-14 81.3 114 47.4
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 1.5e-13 80.1 122 41.0
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.5e-13 79.3 110 50.9
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 2.5e-13 79.3 107 47.7
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 2.5e-13 79.3 106 47.2
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 2.5e-13 79.3 109 45.0
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.3e-13 78.6 110 50.9
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 5.6e-13 78.2 118 45.8
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 9.6e-13 77.4 117 42.7
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.3e-12 77.0 124 43.5
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 1.6e-12 76.6 131 45.0
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 1.6e-12 76.6 117 44.4
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 2.8e-12 75.9 101 47.5
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 3.6e-12 75.5 114 45.6
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 4.8e-12 75.1 119 42.0
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 8.1e-12 74.3 120 47.5
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.8e-11 73.2 113 45.1
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.0e-11 72.0 126 42.1
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 4.0e-11 72.0 118 43.2
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 5.3e-11 71.6 127 41.7
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 6.9e-11 71.2 106 44.3
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.2e-10 70.5 106 43.4
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 1.5e-10 70.1 121 42.1
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 3.4e-10 68.9 120 39.2
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 3.4e-10 68.9 103 46.6
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 9.9e-10 67.4 81 49.4
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 1.3e-09 67.0 120 38.3
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.7e-09 66.6 107 46.7
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 2.2e-09 66.2 97 46.4
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 3.8e-09 65.5 119 40.3
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 4.9e-09 65.1 119 40.3
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 6.4e-09 64.7 117 39.3
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.9e-08 63.2 107 41.1
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 5.4e-08 61.6 102 41.2
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 5.4e-08 61.6 102 41.2
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 1.2e-07 60.5 102 44.1
HPP92_018844 Vanilla planifolia HOM05D026889 ORTHO05D009638 2.7e-07 59.3 102 44.1
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 3.5e-07 58.9 104 43.3
Atru.chr3.61 Acer truncatum HOM05D007735 ORTHO05D009638 1.7e-06 56.6 76 46.1


User provided reference genes

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