Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 9.7e-98 360.1 182 100.0
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 7.9e-92 340.5 182 92.9
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 4.5e-63 245.0 188 68.6
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 2.1e-60 236.1 188 66.5
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 7.5e-58 227.6 189 66.7
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 8.3e-57 224.2 184 64.1
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.1e-56 223.8 183 64.5
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.1e-56 223.8 191 65.4
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 1.4e-56 223.4 188 62.8
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 5.4e-56 221.5 186 63.4
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 7.0e-56 221.1 189 63.5
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 9.2e-56 220.7 191 64.4
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.2e-55 220.3 185 68.1
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 2.7e-55 219.2 151 73.5
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 2.7e-55 219.2 150 72.0
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 3.5e-55 218.8 191 64.4
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 7.8e-55 217.6 164 69.5
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.3e-54 216.9 171 64.9
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 6.6e-54 214.5 191 60.2
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 1.5e-53 213.4 180 62.2
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 3.3e-53 212.2 180 62.2
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 4.3e-53 211.8 135 77.0
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 9.5e-53 210.7 129 80.6
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.2e-52 210.3 133 76.7
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 1.2e-52 210.3 131 79.4
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 2.8e-52 209.1 134 76.1
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 4.7e-52 208.4 185 63.8
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 6.2e-52 208.0 132 76.5
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 1.4e-51 206.8 188 59.6
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.4e-51 206.8 191 58.6
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 1.8e-51 206.5 130 78.5
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 1.8e-51 206.5 119 84.9
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 2.3e-51 206.1 190 60.5
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 2.3e-51 206.1 133 76.7
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 3.1e-51 205.7 133 76.7
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 3.1e-51 205.7 156 67.9
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.0e-51 205.3 189 60.8
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 6.8e-51 204.5 135 73.3
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 6.8e-51 204.5 135 73.3
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 8.9e-51 204.1 189 60.8
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 8.9e-51 204.1 189 60.3
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 1.2e-50 203.8 134 74.6
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.2e-50 203.8 189 60.8
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 1.2e-50 203.8 133 75.9
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.5e-50 203.4 189 60.3
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.5e-50 203.4 189 60.3
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 3.4e-50 202.2 125 76.0
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.4e-50 201.8 145 71.0
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 9.8e-50 200.7 140 71.4
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.7e-49 199.9 132 73.5
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 3.7e-49 198.7 179 59.8
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 4.9e-49 198.4 117 81.2
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 4.9e-49 198.4 135 74.8
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 8.3e-49 197.6 137 71.5
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.4e-48 196.8 138 73.9
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 1.4e-48 196.8 135 73.3
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 7.0e-48 194.5 147 67.3
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 6.0e-47 191.4 140 67.1
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 7.8e-47 191.0 165 61.2
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 1.0e-46 190.7 138 75.4
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.0e-46 190.7 190 58.9
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 1.0e-46 190.7 131 70.2
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 1.3e-46 190.3 182 58.8
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 1.3e-46 190.3 182 58.8
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.3e-46 190.3 180 58.3
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.7e-46 189.9 140 67.1
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.7e-46 189.9 188 59.0
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 2.3e-46 189.5 152 63.2
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 3.0e-46 189.1 160 63.8
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 3.0e-46 189.1 129 72.9
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 3.9e-46 188.7 132 73.5
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 5.0e-46 188.3 182 58.8
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 5.0e-46 188.3 182 58.8
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 6.6e-46 188.0 133 72.2
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 6.6e-46 188.0 133 72.2
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 8.6e-46 187.6 131 70.2
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 8.6e-46 187.6 138 66.7
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 8.6e-46 187.6 133 71.4
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 8.6e-46 187.6 110 81.8
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 1.9e-45 186.4 131 69.5
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 2.5e-45 186.0 133 71.4
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.5e-45 186.0 135 68.9
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 2.5e-45 186.0 175 60.0
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 3.3e-45 185.7 142 69.0
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 3.3e-45 185.7 175 60.0
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 7.3e-45 184.5 151 65.6
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 9.5e-45 184.1 135 68.1
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.2e-44 183.7 177 57.1
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 1.2e-44 183.7 149 65.8
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 1.6e-44 183.3 150 63.3
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.6e-44 183.3 161 60.2
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 2.1e-44 183.0 137 72.3
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 2.8e-44 182.6 184 54.3
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 2.8e-44 182.6 151 62.9
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 3.6e-44 182.2 149 64.4
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 3.1e-43 179.1 115 73.0
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 4.0e-43 178.7 133 69.2
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 6.8e-43 177.9 105 80.0
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 8.9e-43 177.6 116 75.9
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 9.8e-42 174.1 129 71.3
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 3.7e-41 172.2 110 76.4
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 4.1e-40 168.7 133 67.7
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 7.1e-40 167.9 117 68.4
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 3.5e-39 165.6 128 67.2
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 6.0e-39 164.9 121 67.8
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 8.6e-38 161.0 161 56.5
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 7.3e-37 157.9 95 80.0
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.2e-36 157.1 90 82.2
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.8e-35 153.3 109 64.2
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.2e-34 150.6 114 66.7
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.5e-34 150.2 123 63.4
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.0e-34 149.8 97 76.3
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.3e-33 147.1 120 64.2
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 4.9e-33 145.2 123 56.1
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 8.4e-33 144.4 108 64.8
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 2.1e-31 139.8 111 60.4
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 6.6e-30 134.8 123 51.2
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 1.2e-26 124.0 124 50.0
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.3e-17 94.0 93 57.0
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 8.4e-17 91.3 131 40.5
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 3.2e-16 89.4 98 45.9
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 7.9e-15 84.7 51 74.5
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.7e-09 67.0 61 52.5
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 1.6e-07 60.5 81 42.0
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 8.7e-06 54.7 65 53.8


User provided reference genes

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