Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 3.1e-44 181.4 91 100.0
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 9.3e-41 169.9 91 94.5
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 2.1e-40 168.7 91 94.5
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 3.5e-40 167.9 91 94.5
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 7.9e-40 166.8 91 93.4
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 2.5e-30 135.2 91 79.1
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.3e-30 134.8 91 79.1
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 3.3e-30 134.8 91 79.1
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 7.9e-16 87.0 91 54.9
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 8.2e-13 77.0 92 51.1
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 1.1e-12 76.6 97 46.4
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 2.4e-12 75.5 91 48.4
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 6.9e-12 73.9 92 48.9
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 9.1e-12 73.6 91 48.4
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.5e-11 72.8 94 45.7
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 1.5e-11 72.8 94 45.7
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.0e-11 72.4 94 45.7
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 2.6e-11 72.0 92 51.1
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 2.6e-11 72.0 92 50.0
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 1.0e-10 70.1 91 39.6
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 1.0e-10 70.1 94 46.8
Sabra11G0136100 Salix brachista HOM05D043744 ORTHO05D006961 1.7e-10 69.3 89 50.6
Manes.01G055000 Manihot esculenta HOM05D008613 ORTHO05D006961 2.2e-10 68.9 95 48.4
Potri.011G151600 Populus trichocarpa HOM05D008613 ORTHO05D006961 2.9e-10 68.6 91 48.4
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 2.9e-10 68.6 92 42.4
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 8.5e-10 67.0 89 47.2
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 8.5e-10 67.0 88 42.0
Sabra11G0149000 Salix brachista HOM05D043744 ORTHO05D006961 1.4e-09 66.2 70 61.4
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 1.9e-09 65.9 93 43.0
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 1.9e-09 65.9 93 43.0
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 3.2e-09 65.1 100 40.0
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 4.2e-09 64.7 89 47.2
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 7.2e-09 63.9 93 44.1
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 7.2e-09 63.9 105 43.8
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 9.4e-09 63.5 91 42.9
Haze_09201 Corylus avellana HOM05D019613 ORTHO05D006961 9.4e-09 63.5 89 41.6
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 9.4e-09 63.5 105 41.9
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 1.6e-08 62.8 88 43.2
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 2.1e-08 62.4 91 41.8
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 2.1e-08 62.4 91 41.8
Aa31LG6G7510 Aethionema arabicum HOM05D008703 ORTHO05D006961 2.7e-08 62.0 90 43.3
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 4.7e-08 61.2 92 43.5
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 4.7e-08 61.2 92 43.5
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 4.7e-08 61.2 92 43.5
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 4.7e-08 61.2 92 43.5
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 4.7e-08 61.2 95 47.4
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 6.1e-08 60.8 101 39.6
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 6.1e-08 60.8 92 42.4
Aa31LG9G11540 Aethionema arabicum HOM05D008703 ORTHO05D006961 7.9e-08 60.5 88 40.9
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 7.9e-08 60.5 88 42.0
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 7.9e-08 60.5 88 39.8
Rhsim02G0253700 Rhododendron simsii HOM05D008613 ORTHO05D006961 1.4e-07 59.7 92 43.5
COL.COLO4_10830 Corchorus olitorius HOM05D008613 ORTHO05D006961 2.3e-07 58.9 91 41.8
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 2.3e-07 58.9 104 39.4
Cfa011897 Carpinus fangiana HOM05D019613 ORTHO05D006961 3.0e-07 58.5 91 42.9
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 3.0e-07 58.5 86 40.7
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 3.9e-07 58.2 91 41.8
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 3.9e-07 58.2 90 38.9
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 3.9e-07 58.2 102 42.2
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 5.1e-07 57.8 98 37.8
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 5.1e-07 57.8 98 43.9
Aa31LG9G11460 Aethionema arabicum HOM05D008703 ORTHO05D006961 6.7e-07 57.4 88 40.9
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 6.7e-07 57.4 99 40.4
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 6.7e-07 57.4 94 39.4
Aa31LG9G11510 Aethionema arabicum HOM05D008703 ORTHO05D006961 8.8e-07 57.0 88 39.8
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 8.8e-07 57.0 94 40.4
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 8.8e-07 57.0 100 39.0
CARHR032240 Cardamine hirsuta HOM05D008703 ORTHO05D006961 1.1e-06 56.6 88 44.3
Eucgr.D01659 Eucalyptus grandis HOM05D008613 ORTHO05D006961 1.1e-06 56.6 98 36.7
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 1.1e-06 56.6 88 37.5
Prupe.5G133200 Prunus persica HOM05D008613 ORTHO05D006961 1.5e-06 56.2 102 42.2
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 2.0e-06 55.8 94 36.2
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 2.0e-06 55.8 89 40.4
EL10Ac3g05184 Beta vulgaris HOM05D008613 ORTHO05D006961 2.6e-06 55.5 91 38.5
A09p33470 Brassica napus HOM05D008703 ORTHO05D006961 2.6e-06 55.5 88 43.2
BraA09t38889Z Brassica rapa HOM05D008703 ORTHO05D006961 2.6e-06 55.5 88 43.2
Duzib205G1426 Durio zibethinus HOM05D018669 ORTHO05D011237 2.6e-06 55.5 94 41.5
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 3.3e-06 55.1 97 40.2
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 4.4e-06 54.7 94 37.2
Ah.13g070730 Amaranthus hybridus HOM05D008613 ORTHO05D011237 5.7e-06 54.3 94 39.4
Nn3g18877 Nelumbo nucifera HOM05D031625 ORTHO05D006961 5.7e-06 54.3 95 40.0
Nn3g18879 Nelumbo nucifera HOM05D031625 ORTHO05D006961 5.7e-06 54.3 95 40.0
RcHm_v2.0_Chr7g0187591 Rosa chinensis HOM05D008613 ORTHO05D006961 5.7e-06 54.3 88 38.6
AL1G47200 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 7.4e-06 53.9 90 41.1
AT1G32920 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 7.4e-06 53.9 88 40.9
Nn1g00438 Nelumbo nucifera HOM05D008613 ORTHO05D006961 7.4e-06 53.9 97 44.3
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 9.7e-06 53.5 90 41.1
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 9.7e-06 53.5 94 37.2


User provided reference genes

Program Settings