Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0296100 Salix brachista HOM05D003874 ORTHO05D004545 9.3e-50 199.9 101 100.0
Sabra16G0293600 Salix brachista HOM05D003874 ORTHO05D004545 3.8e-43 177.9 100 87.0
Sabra16G0294500 Salix brachista HOM05D003874 ORTHO05D004545 6.5e-43 177.2 100 86.0
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.7e-35 152.5 100 77.0
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 2.2e-35 152.1 100 77.0
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 2.2e-35 152.1 100 77.0
Sabra16G0293500 Salix brachista HOM05D003874 ORTHO05D004545 2.3e-32 142.1 99 75.8
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 3.0e-32 141.7 98 71.4
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 2.8e-30 135.2 100 68.0
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 3.9e-24 114.8 98 55.1
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 6.3e-22 107.5 98 54.1
Sabra16G0296200 Salix brachista HOM05D003874 ORTHO05D349051 3.8e-19 98.2 112 53.6
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 1.9e-18 95.9 91 54.9
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 2.7e-17 92.0 108 52.8
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 1.8e-16 89.4 108 51.9
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 2.3e-16 89.0 92 52.2
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 3.3e-15 85.1 98 50.0
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 7.4e-15 84.0 102 49.0
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 1.3e-14 83.2 94 45.7
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 1.7e-14 82.8 102 51.0
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 1.7e-14 82.8 102 51.0
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 1.7e-14 82.8 102 51.0
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 1.7e-14 82.8 115 44.3
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 2.2e-14 82.4 98 49.0
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.8e-14 82.0 98 45.9
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 2.8e-14 82.0 98 46.9
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 4.8e-14 81.3 100 49.0
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 6.3e-14 80.9 101 50.5
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 1.1e-13 80.1 98 46.9
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 1.8e-13 79.3 98 44.9
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 1.8e-13 79.3 105 44.8
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 1.2e-12 76.6 109 48.6
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 1.2e-12 76.6 96 46.9
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 1.6e-12 76.3 109 48.6
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 2.0e-12 75.9 105 44.8
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 2.0e-12 75.9 101 45.5
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.0e-11 73.6 110 40.0
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 3.8e-11 71.6 88 42.0
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 5.5e-10 67.8 103 39.8
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 5.5e-10 67.8 90 42.2
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 5.5e-10 67.8 109 38.5
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 2.1e-09 65.9 100 42.0
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 2.1e-09 65.9 90 43.3
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 2.1e-09 65.9 90 43.3
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 2.1e-09 65.9 90 43.3
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 2.1e-09 65.9 84 42.9
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.1e-09 65.9 95 38.9
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 2.7e-09 65.5 94 42.6
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 3.6e-09 65.1 105 39.0
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 4.7e-09 64.7 101 39.6
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 4.7e-09 64.7 101 39.6
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 6.1e-09 64.3 101 40.6
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.4e-08 63.2 89 38.2
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.4e-08 63.2 105 38.1
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.8e-08 62.8 90 42.2
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 2.3e-08 62.4 90 42.2
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 3.0e-08 62.0 105 38.1
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 3.0e-08 62.0 109 36.7
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 4.0e-08 61.6 100 41.0
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 8.8e-08 60.5 93 40.9
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 2.0e-07 59.3 103 37.9
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 2.0e-07 59.3 109 35.8
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 4.4e-07 58.2 95 37.9
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 5.7e-07 57.8 117 34.2
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 7.5e-07 57.4 91 39.6
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 7.5e-07 57.4 104 35.6
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 7.5e-07 57.4 97 37.1
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 2.8e-06 55.5 106 35.8
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 4.8e-06 54.7 95 36.8


User provided reference genes

Program Settings