Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0293600 Salix brachista HOM05D003874 ORTHO05D004545 1.1e-57 226.5 115 100.0
Sabra16G0294500 Salix brachista HOM05D003874 ORTHO05D004545 1.2e-45 186.4 99 92.9
Sabra16G0296100 Salix brachista HOM05D003874 ORTHO05D004545 1.9e-43 179.1 100 87.0
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 2.5e-35 152.1 100 77.0
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 3.3e-35 151.8 100 77.0
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 3.3e-35 151.8 100 77.0
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 4.5e-32 141.4 98 71.4
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 3.8e-31 138.3 100 70.0
Sabra16G0293500 Salix brachista HOM05D003874 ORTHO05D004545 3.8e-31 138.3 98 74.5
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 1.7e-23 112.8 98 55.1
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 2.7e-21 105.5 98 54.1
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 2.8e-18 95.5 91 52.7
Sabra16G0296200 Salix brachista HOM05D003874 ORTHO05D349051 1.1e-17 93.6 111 52.3
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 4.1e-17 91.7 108 51.9
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 1.2e-16 90.1 92 51.1
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 1.5e-16 89.7 108 50.9
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 3.8e-15 85.1 98 51.0
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 5.0e-15 84.7 115 47.0
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 6.5e-15 84.3 115 44.3
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 1.1e-14 83.6 102 49.0
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 1.1e-14 83.6 98 48.0
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 1.4e-14 83.2 98 48.0
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 1.4e-14 83.2 94 46.8
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 2.5e-14 82.4 102 49.0
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 2.5e-14 82.4 102 49.0
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 2.5e-14 82.4 98 46.9
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 4.2e-14 81.6 98 43.9
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 5.5e-14 81.3 105 44.8
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 5.5e-14 81.3 100 49.0
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 7.2e-14 80.9 101 50.5
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 9.4e-14 80.5 105 46.7
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.7e-13 79.0 98 42.9
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 3.6e-13 78.6 96 46.9
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 1.8e-12 76.3 109 49.5
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.8e-12 76.3 109 41.3
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 2.3e-12 75.9 109 49.5
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 2.3e-12 75.9 101 46.5
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 1.1e-11 73.6 88 42.0
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 2.0e-11 72.8 90 46.7
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 5.7e-11 71.2 100 45.0
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 9.7e-11 70.5 90 46.7
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 9.7e-11 70.5 90 46.7
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 9.7e-11 70.5 90 46.7
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 2.8e-10 68.9 94 43.6
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 4.8e-10 68.2 95 38.9
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 8.2e-10 67.4 109 38.5
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.1e-09 67.0 102 40.2
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 1.4e-09 66.6 89 40.4
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.4e-09 66.6 90 44.4
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 1.4e-09 66.6 104 35.6
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 2.4e-09 65.9 89 40.4
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 3.1e-09 65.5 84 44.0
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 9.1e-09 63.9 105 40.0
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 9.1e-09 63.9 101 39.6
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 1.2e-08 63.5 109 39.4
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 3.4e-08 62.0 105 38.1
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 3.4e-08 62.0 105 39.0
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 5.9e-08 61.2 95 38.9
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 1.0e-07 60.5 100 41.0
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 1.3e-07 60.1 103 35.0
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 1.3e-07 60.1 93 40.9
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 1.7e-07 59.7 109 33.9
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 2.9e-07 58.9 101 36.6
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 2.9e-07 58.9 101 36.6
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 3.8e-07 58.5 117 35.0
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 6.5e-07 57.8 106 37.7
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 1.9e-06 56.2 93 38.7
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 1.9e-06 56.2 104 35.6
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 2.5e-06 55.8 91 37.4
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 7.2e-06 54.3 97 34.0


User provided reference genes

Program Settings