Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0288900 Salix brachista HOM05D007003 ORTHO05D008499 5.1e-207 724.2 365 100.0
Potri.001G423900 Populus trichocarpa HOM05D007003 ORTHO05D008499 2.5e-193 678.7 365 93.2
Dinv40746 Davidia involucrata HOM05D007003 ORTHO05D008499 5.5e-100 368.6 401 50.6
Atru.chr2.3373 Acer truncatum HOM05D007003 ORTHO05D008499 7.4e-97 358.2 430 49.3
CiPaw.12G128900 Carya illinoinensis HOM05D007003 ORTHO05D008499 6.9e-95 351.7 418 49.5
Manes.03G124400 Manihot esculenta HOM05D007003 ORTHO05D008499 1.5e-94 350.5 357 53.5
Medtr5g092280 Medicago truncatula HOM05D007003 ORTHO05D008499 6.5e-93 345.1 357 51.5
CSS0047719 Camellia sinensis var. sinensis HOM05D007003 ORTHO05D008499 1.9e-92 343.6 369 51.5
Cpa.g.sc97.17 Carica papaya HOM05D007003 ORTHO05D008499 1.9e-92 343.6 442 44.6
Ciclev10008359m.g Citrus clementina HOM05D007003 ORTHO05D008499 2.5e-92 343.2 436 47.9
Thecc.07G042400 Theobroma cacao HOM05D007003 ORTHO05D008499 7.2e-92 341.7 475 43.8
MELO3C018208.2 Cucumis melo HOM05D007003 ORTHO05D008499 1.3e-90 337.4 322 55.3
Haze_09661 Corylus avellana HOM05D007003 ORTHO05D008499 2.3e-90 336.7 490 43.1
Glyma.14G024800 Glycine max HOM05D007003 ORTHO05D008499 3.9e-90 335.9 382 49.7
MD11G1220900 Malus domestica HOM05D001273 ORTHO05D008499 6.7e-90 335.1 458 45.2
Oeu007586.1 Olea europaea HOM05D007003 ORTHO05D008499 3.3e-89 332.8 317 54.9
Cfa020358 Carpinus fangiana HOM05D007003 ORTHO05D008499 2.2e-88 330.1 441 46.3
Lalb_Chr04g0248491 Lupinus albus HOM05D007003 ORTHO05D008499 2.2e-88 330.1 370 49.7
QL03p009927 Quercus lobata HOM05D007003 ORTHO05D008499 2.2e-88 330.1 458 44.1
Nitab4.5_0001913g0010 Nicotiana tabacum HOM05D007003 ORTHO05D008499 4.8e-88 328.9 316 55.4
Gohir.A04G018400 Gossypium hirsutum HOM05D007003 ORTHO05D008499 6.3e-88 328.6 395 49.1
QL08p011145 Quercus lobata HOM05D007003 ORTHO05D008499 6.3e-88 328.6 458 44.3
Prupe.4G211300 Prunus persica HOM05D007003 ORTHO05D008499 1.4e-87 327.4 432 45.4
Gohir.D05G367600 Gossypium hirsutum HOM05D007003 ORTHO05D008499 1.8e-87 327.0 391 49.4
CsaV3_3G044430 Cucumis sativus L. HOM05D007003 ORTHO05D008499 2.4e-87 326.6 322 54.0
Cc05_g13800 Coffea canephora HOM05D007003 ORTHO05D008499 6.9e-87 325.1 317 52.7
Gorai.009G435200 Gossypium raimondii HOM05D007003 ORTHO05D008499 9.0e-87 324.7 391 49.1
RcHm_v2.0_Chr5g0039141 Rosa chinensis HOM05D007003 ORTHO05D008499 9.0e-87 324.7 478 43.5
Sed0008518 Sechium edule HOM05D007003 ORTHO05D008499 2.6e-86 323.2 370 51.4
FvH4_3g22471 Fragaria vesca HOM05D007003 ORTHO05D008499 7.7e-86 321.6 459 44.2
GSVIVG01037627001 Vitis vinifera HOM05D007003 ORTHO05D008499 2.9e-85 319.7 414 48.1
TAR627G0793 Trochodendron aralioides HOM05D007003 ORTHO05D008499 3.8e-85 319.3 420 46.4
Nitab4.5_0003812g0060 Nicotiana tabacum HOM05D007003 ORTHO05D008499 8.5e-85 318.2 316 53.8
VMungo0647G1301 Vigna mungo HOM05D007003 ORTHO05D008499 1.1e-84 317.8 395 47.6
EL10Ac4g07838 Beta vulgaris HOM05D007003 ORTHO05D008499 1.9e-84 317.0 398 47.2
FAN21G0080 Fragaria x ananassa HOM05D007003 ORTHO05D008499 9.4e-84 314.7 427 44.5
PGSC0003DMG400042605 Solanum tuberosum HOM05D007003 ORTHO05D008499 1.6e-83 313.9 318 52.8
vmacro11731 Vaccinium macrocarpon HOM05D007003 ORTHO05D008499 1.6e-83 313.9 314 54.5
Duzib213G0769 Durio zibethinus HOM05D007003 ORTHO05D008499 2.1e-83 313.5 529 39.7
TPR.G22251 Trifolium pratense HOM05D007003 ORTHO05D008499 2.1e-83 313.5 337 51.0
Migut.M01775 Erythranthe guttata HOM05D007003 ORTHO05D008499 2.7e-83 313.2 317 53.6
LjContig00272g0003747 Lotus japonicus HOM05D007003 ORTHO05D008499 4.6e-83 312.4 392 48.5
Ah.04g165820 Amaranthus hybridus HOM05D007003 ORTHO05D008499 6.1e-83 312.0 382 46.9
AUR62020466 Chenopodium quinoa HOM05D007003 ORTHO05D008499 2.3e-82 310.1 394 47.0
Peaxi162Scf00964g00113 Petunia axillaris HOM05D007003 ORTHO05D008499 3.0e-82 309.7 336 52.1
Phvul.008G266200 Phaseolus vulgaris HOM05D007003 ORTHO05D008499 5.1e-82 308.9 384 47.4
Sopen07g032680 Solanum pennellii HOM05D007003 ORTHO05D008499 5.1e-82 308.9 317 51.7
Solyc07g064480.1 Solanum lycopersicum HOM05D007003 ORTHO05D008499 2.0e-81 307.0 329 50.8
AUR62015746 Chenopodium quinoa HOM05D007003 ORTHO05D008499 3.3e-81 306.2 394 46.7
Eucgr.F00779 Eucalyptus grandis HOM05D007003 ORTHO05D008499 4.3e-81 305.8 368 47.3
PGR119G0071 Punica granatum HOM05D007003 ORTHO05D008499 1.3e-80 304.3 374 49.5
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 2.8e-80 303.1 362 49.7
Lj1P870T43 Lonicera japonica HOM05D007003 ORTHO05D008499 6.3e-80 302.0 363 48.5
BcaB05g22167 Brassica carinata HOM05D007003 ORTHO05D008499 4.1e-79 299.3 327 52.0
arahy.Tifrunner.gnm1.ann1.422Z41 Arachis hypogaea HOM05D007003 ORTHO05D008499 1.2e-78 297.7 457 42.7
Actinidia36944 Actinidia chinensis HOM05D001273 ORTHO05D000023 1.5e-78 297.4 317 52.4
C02p16580 Brassica napus HOM05D001404 ORTHO05D002309 1.5e-78 297.4 325 51.4
BolC2t07756H Brassica oleracea HOM05D001404 ORTHO05D002309 2.6e-78 296.6 320 52.8
A02p10000 Brassica napus HOM05D001404 ORTHO05D008499 4.5e-78 295.8 324 52.5
BraA02t06064Z Brassica rapa HOM05D001404 ORTHO05D002309 4.5e-78 295.8 324 52.5
Thhalv10013739m.g Eutrema salsugineum HOM05D007003 ORTHO05D008499 1.0e-77 294.7 378 47.1
arahy.Tifrunner.gnm1.ann1.6A6QM9 Arachis hypogaea HOM05D007003 ORTHO05D008499 1.1e-76 291.2 432 43.1
Cfa020360 Carpinus fangiana HOM05D007003 ORTHO05D008499 1.4e-76 290.8 425 43.5
THA.LOC104817663 Tarenaya hassleriana HOM05D007003 ORTHO05D008499 1.4e-76 290.8 400 44.2
Nn1g03566 Nelumbo nucifera HOM05D007003 ORTHO05D008499 5.5e-76 288.9 488 39.3
DCAR_022556 Daucus carota HOM05D007003 ORTHO05D008499 9.4e-76 288.1 315 52.4
Lsat_1_v5_gn_5_6061 Lactuca sativa HOM05D007003 ORTHO05D008499 1.2e-75 287.7 364 46.7
Sp6g16850 Schrenkiella parvula HOM05D007003 ORTHO05D008499 1.6e-75 287.3 380 47.6
CANSAT21G1622 Cannabis sativa HOM05D007003 ORTHO05D008499 2.7e-75 286.6 436 42.0
CARHR268220 Cardamine hirsuta HOM05D007003 ORTHO05D008499 2.7e-75 286.6 362 48.3
Eucgr.F00955 Eucalyptus grandis HOM05D007003 ORTHO05D008499 3.9e-74 282.7 339 47.8
AT5G54880 Arabidopsis thaliana HOM05D007003 ORTHO05D008499 1.1e-73 281.2 377 45.4
Eucgr.F00790 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.7e-72 277.3 333 48.6
Aa31LG3G10810 Aethionema arabicum HOM05D007003 ORTHO05D008499 8.2e-72 275.0 362 45.0
Aqoxy7G03837 Aquilegia oxysepala HOM05D007003 ORTHO05D008499 1.1e-71 274.6 420 41.4
AL8G30340 Arabidopsis lyrata HOM05D007003 ORTHO05D008499 3.1e-71 273.1 385 44.4
Rhsim06G0216400 Rhododendron simsii HOM05D000561 ORTHO05D000514 1.6e-70 270.8 319 48.6
PSO675G0160 Papaver somniferum HOM05D007003 ORTHO05D008499 3.5e-70 269.6 348 45.7
unitig_578.g16000 Utricularia gibba HOM05D007003 ORTHO05D008499 4.5e-70 269.2 350 47.1
Psat2g013360 Pisum sativum HOM05D007003 ORTHO05D008499 1.9e-68 263.8 329 46.8
Eucgr.F00922 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.6e-67 260.8 342 46.2
ECA246G4814 Erigeron canadensis HOM05D001273 ORTHO05D000023 2.7e-67 260.0 324 46.3
Eucgr.F00879 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.8e-66 257.3 331 48.6
HPP92_012320 Vanilla planifolia HOM05D007003 ORTHO05D008499 9.7e-65 251.5 374 41.7
Eucgr.L01323 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.3e-64 251.1 323 46.1
HPP92_012396 Vanilla planifolia HOM05D007003 ORTHO05D008499 4.8e-64 249.2 374 41.4
ATR0752G213 Amborella trichopoda HOM05D007003 ORTHO05D008499 4.1e-63 246.1 441 39.0
SGA_v2.0_scaffold424G51477 Striga asiatica HOM05D007003 ORTHO05D008499 5.3e-63 245.7 338 46.7
Ca_26481_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 4.5e-62 242.7 242 52.1
Sc16g0006140 Simmondsia chinensis HOM05D007003 ORTHO05D008499 5.2e-58 229.2 378 38.4
Eucgr.F00913 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.2e-57 228.0 340 41.8
SalBow8G3099 Salvia bowleyana HOM05D007003 ORTHO05D008499 1.8e-55 220.7 207 56.0
Eucgr.F00897 Eucalyptus grandis HOM05D007003 ORTHO05D008499 3.1e-55 219.9 305 43.6
Actinidia05100 Actinidia chinensis HOM05D007003 ORTHO05D008499 3.2e-52 209.9 245 49.8
Eucgr.F00928 Eucalyptus grandis HOM05D007003 ORTHO05D008499 5.5e-52 209.1 303 41.6
Zm00001eb219850 Zea mays HOM05D007003 ORTHO05D008499 1.4e-50 204.5 490 30.4
TPR.G17434 Trifolium pratense HOM05D007003 ORTHO05D008499 8.8e-50 201.8 199 51.3
MBI02_g22102_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 1.5e-49 201.1 206 51.0
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 2.8e-48 196.8 325 41.5
Carub.0008s1518 Capsella rubella HOM05D007003 ORTHO05D008499 3.7e-48 196.4 201 53.7
MBI02_g19288_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 1.1e-47 194.9 233 45.5
Os03g0568600 Oryza sativa ssp. japonica HOM05D007003 ORTHO05D008499 1.3e-45 188.0 479 29.4
CDE11G0477 Ceratophyllum demersum HOM05D007003 ORTHO05D008499 3.8e-45 186.4 267 39.7
BcaC03g14277 Brassica carinata HOM05D007003 ORTHO05D008499 2.5e-44 183.7 157 59.9
Zm00001eb026290 Zea mays HOM05D007003 ORTHO05D008499 9.5e-44 181.8 194 46.9
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 1.4e-39 167.9 240 42.9
AagrBONN_evm.TU.Sc2ySwM_362.2079 Anthoceros agrestis HOM05D007003 ORTHO05D008499 3.6e-35 153.3 315 36.5
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 3.2e-31 140.2 335 33.1
Mapoly0032s0131 Marchantia polymorpha HOM05D007003 ORTHO05D008499 5.4e-31 139.4 341 33.4
Ca_03331_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 9.2e-31 138.7 144 50.7
MD03G1204100 Malus domestica HOM05D007003 ORTHO05D008499 1.2e-25 121.7 105 59.0
TPR.G1180 Trifolium pratense HOM05D007003 ORTHO05D008499 8.3e-24 115.5 91 61.5
CAN.G337.122 Capsicum annuum HOM05D007003 ORTHO05D008499 5.4e-23 112.8 77 70.1
TPR.G1231 Trifolium pratense HOM05D007003 ORTHO05D008499 5.4e-23 112.8 94 58.5
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 2.7e-22 110.5 306 30.1
CAN.G337.121 Capsicum annuum HOM05D007003 ORTHO05D008499 3.5e-22 110.2 270 30.4
MBI02_g22101_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D002463 9.9e-17 92.0 91 53.8
ClCG05G014280 Citrullus lanatus HOM05D007003 ORTHO05D008499 4.9e-16 89.7 53 71.7
Medtr0590s0020 Medicago truncatula HOM05D007003 ORTHO05D263438 8.4e-16 89.0 172 31.4
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 1.2e-14 85.1 86 45.3
Actinidia05099 Actinidia chinensis HOM05D001273 ORTHO05D000023 3.6e-11 73.6 60 58.3


User provided reference genes

Program Settings