Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0287300 Salix brachista HOM05D014998 ORTHO05D018092 7.6e-58 227.3 142 100.0
Sabra16G0286700 Salix brachista HOM05D014998 ORTHO05D018092 1.6e-39 166.4 131 85.5
Sabra16G0286600 Salix brachista HOM05D014998 ORTHO05D018092 2.6e-34 149.1 129 82.2
Sabra16G0287100 Salix brachista HOM05D014998 ORTHO05D018092 8.5e-33 144.1 125 80.8
Potri.001G422000 Populus trichocarpa HOM05D014998 ORTHO05D018092 3.2e-32 142.1 120 75.8
Sabra16G0286900 Salix brachista HOM05D014998 ORTHO05D018092 2.6e-29 132.5 98 91.8
Potri.001G422301 Populus trichocarpa HOM05D014998 ORTHO05D331511 4.1e-27 125.2 110 79.1
Potri.003G102300 Populus trichocarpa HOM05D014998 ORTHO05D018092 7.0e-27 124.4 126 70.6
Sabra16G0287400 Salix brachista HOM05D014998 ORTHO05D018092 9.1e-27 124.0 98 87.8
Sabra03G0069700 Salix brachista HOM05D014998 ORTHO05D018092 9.8e-21 104.0 117 65.8
Potri.003G101900 Populus trichocarpa HOM05D006944 ORTHO05D009910 1.3e-09 67.0 104 39.4
Potri.003G102000 Populus trichocarpa HOM05D006944 ORTHO05D009910 1.3e-09 67.0 104 39.4
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 2.9e-09 65.9 62 54.8
Gorai.013G143700 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.5e-08 63.5 88 43.2
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.3e-08 62.4 87 41.4
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 3.3e-08 62.4 93 39.8
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 3.3e-08 62.4 105 40.0
Potri.003G152400 Populus trichocarpa HOM05D011228 ORTHO05D015182 4.3e-08 62.0 88 62.5
Gohir.D13G128233 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.6e-08 61.6 84 44.0
Gohir.D08G252466 Gossypium hirsutum HOM05D006944 ORTHO05D009910 7.3e-08 61.2 86 40.7
Sabra03G0069600 Salix brachista HOM05D006944 ORTHO05D009910 1.2e-07 60.5 98 36.7
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 1.2e-07 60.5 98 37.8
Sabra01G0101600 Salix brachista HOM05D006944 ORTHO05D009910 2.1e-07 59.7 106 34.9
Potri.003G152100 Populus trichocarpa HOM05D011228 ORTHO05D015182 2.8e-07 59.3 121 36.4
Gorai.002G108100 Gossypium raimondii HOM05D006944 ORTHO05D009910 3.6e-07 58.9 99 59.6
Duzib032G0001 Durio zibethinus HOM05D006944 ORTHO05D035094 6.1e-07 58.2 109 46.8
Duzib128G1158 Durio zibethinus HOM05D006944 ORTHO05D035094 6.1e-07 58.2 109 46.8
Sabra01G0055300 Salix brachista HOM05D011228 ORTHO05D015182 8.0e-07 57.8 121 42.1
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 8.0e-07 57.8 109 34.9
Sabra03G0111300 Salix brachista HOM05D006944 ORTHO05D009910 1.0e-06 57.4 92 41.3
Duzib187G0489 Durio zibethinus HOM05D006944 ORTHO05D009910 1.4e-06 57.0 121 34.7
Thecc.07G175300 Theobroma cacao HOM05D006944 ORTHO05D009910 1.4e-06 57.0 56 53.6
Gohir.A08G232100 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.8e-06 56.6 49 59.2
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 1.8e-06 56.6 105 39.0
Duzib213G0468 Durio zibethinus HOM05D006944 ORTHO05D009910 2.3e-06 56.2 106 34.9
Gohir.A03G217500 Gossypium hirsutum HOM05D006944 ORTHO05D036044 2.3e-06 56.2 110 36.4
Gohir.D02G239400 Gossypium hirsutum HOM05D006944 ORTHO05D036044 2.3e-06 56.2 114 42.1
Gohir.A01G098051 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.0e-06 55.8 105 37.1
Gohir.A13G125001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 4.0e-06 55.5 121 35.5
Potri.001G131500 Populus trichocarpa HOM05D006944 ORTHO05D009910 4.0e-06 55.5 114 49.1
Thecc.07G173000 Theobroma cacao HOM05D006944 ORTHO05D009910 4.0e-06 55.5 105 44.8
Duzib213G0044 Durio zibethinus HOM05D006944 ORTHO05D009910 5.2e-06 55.1 115 35.7
Duzib213G1066 Durio zibethinus HOM05D006944 ORTHO05D009910 5.2e-06 55.1 55 50.9
Gohir.A08G232200 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.2e-06 55.1 116 35.3
Sabra03G0110600 Salix brachista HOM05D011228 ORTHO05D015182 5.2e-06 55.1 116 51.7
Thecc.05G191600 Theobroma cacao HOM05D006944 ORTHO05D009910 5.2e-06 55.1 101 39.6
Potri.003G151900 Populus trichocarpa HOM05D011228 ORTHO05D015182 6.8e-06 54.7 127 49.6
Duzib213G0882 Durio zibethinus HOM05D006944 ORTHO05D009910 8.9e-06 54.3 118 37.3
Gohir.A01G097900 Gossypium hirsutum HOM05D006944 ORTHO05D009910 8.9e-06 54.3 56 51.8
Gorai.005G267800 Gossypium raimondii HOM05D006944 ORTHO05D036044 8.9e-06 54.3 115 33.9


User provided reference genes

Program Settings