Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0286900 Salix brachista HOM05D014998 ORTHO05D018092 1.2e-36 156.4 100 100.0
Sabra16G0286700 Salix brachista HOM05D014998 ORTHO05D018092 3.5e-33 144.8 100 92.0
Sabra16G0287400 Salix brachista HOM05D014998 ORTHO05D018092 1.3e-32 142.9 100 93.0
Sabra16G0287100 Salix brachista HOM05D014998 ORTHO05D018092 8.1e-30 133.7 91 95.6
Sabra16G0287300 Salix brachista HOM05D014998 ORTHO05D018092 8.1e-30 133.7 98 91.8
Potri.001G422000 Populus trichocarpa HOM05D014998 ORTHO05D018092 1.1e-26 123.2 100 78.0
Sabra16G0286600 Salix brachista HOM05D014998 ORTHO05D018092 9.3e-26 120.2 100 83.0
Potri.003G102300 Populus trichocarpa HOM05D014998 ORTHO05D018092 2.5e-23 112.1 100 76.0
Potri.001G422301 Populus trichocarpa HOM05D014998 ORTHO05D331511 1.9e-18 95.9 83 81.9
Sabra03G0069700 Salix brachista HOM05D014998 ORTHO05D018092 1.8e-16 89.4 83 73.5
Potri.003G101900 Populus trichocarpa HOM05D006944 ORTHO05D009910 2.2e-11 72.4 89 46.1
Potri.003G102000 Populus trichocarpa HOM05D006944 ORTHO05D009910 2.2e-11 72.4 89 46.1
Gorai.013G143700 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.2e-09 66.6 88 44.3
Sabra03G0069600 Salix brachista HOM05D006944 ORTHO05D009910 1.6e-09 66.2 87 41.4
Potri.003G152400 Populus trichocarpa HOM05D011228 ORTHO05D015182 2.1e-09 65.9 85 65.9
Gohir.D13G128233 Gossypium hirsutum HOM05D006944 ORTHO05D009910 6.0e-09 64.3 84 45.2
Potri.003G152100 Populus trichocarpa HOM05D011228 ORTHO05D015182 5.1e-08 61.2 99 39.4
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 8.7e-08 60.5 90 38.9
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.1e-07 60.1 94 39.4
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.5e-07 59.7 84 40.5
Sabra03G0111300 Salix brachista HOM05D006944 ORTHO05D009910 1.9e-07 59.3 92 41.3
Duzib187G0489 Durio zibethinus HOM05D006944 ORTHO05D009910 3.3e-07 58.5 91 37.4
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 3.3e-07 58.5 82 40.2
Gohir.D08G252466 Gossypium hirsutum HOM05D006944 ORTHO05D009910 4.3e-07 58.2 83 39.8
Sabra01G0101600 Salix brachista HOM05D006944 ORTHO05D009910 4.3e-07 58.2 83 39.8
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 4.3e-07 58.2 83 41.0
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 7.4e-07 57.4 83 42.2
Potri.001G078100 Populus trichocarpa HOM05D011228 ORTHO05D015182 9.6e-07 57.0 90 57.8
Thecc.05G191600 Theobroma cacao HOM05D006944 ORTHO05D009910 9.6e-07 57.0 88 43.2
Thecc.05G191200 Theobroma cacao HOM05D006944 ORTHO05D035094 1.3e-06 56.6 89 38.2
Duzib032G0001 Durio zibethinus HOM05D006944 ORTHO05D035094 1.6e-06 56.2 56 50.0
Duzib128G1158 Durio zibethinus HOM05D006944 ORTHO05D035094 1.6e-06 56.2 56 50.0
Duzib213G0044 Durio zibethinus HOM05D006944 ORTHO05D009910 2.1e-06 55.8 80 41.2
Gohir.A01G098051 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.8e-06 55.5 86 40.7
Gohir.A08G232200 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.8e-06 55.5 90 35.6
Thecc.07G175300 Theobroma cacao HOM05D006944 ORTHO05D009910 2.8e-06 55.5 60 50.0
Duzib093G0469 Durio zibethinus HOM05D006944 ORTHO05D035085 3.7e-06 55.1 91 38.5
Duzib213G0640 Durio zibethinus HOM05D006944 ORTHO05D009910 3.7e-06 55.1 91 37.4
Sabra03G0110600 Salix brachista HOM05D011228 ORTHO05D015182 3.7e-06 55.1 92 56.5
TWI63G0374 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 3.7e-06 55.1 91 40.7
Sabra01G0055300 Salix brachista HOM05D011228 ORTHO05D015182 6.2e-06 54.3 89 44.9
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 6.2e-06 54.3 89 38.2
Potri.003G151900 Populus trichocarpa HOM05D011228 ORTHO05D015182 8.2e-06 53.9 99 53.5


User provided reference genes

Program Settings