Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 5.0e-178 627.9 364 100.0
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.2e-75 287.7 163 91.4
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 7.2e-60 235.3 163 77.9
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 4.7e-51 206.1 163 62.0
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 4.0e-50 203.0 163 65.0
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 6.8e-50 202.2 163 63.2
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 8.8e-50 201.8 165 63.6
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 8.8e-50 201.8 163 66.3
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 2.0e-49 200.7 163 66.9
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 3.4e-49 199.9 165 64.8
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 9.8e-49 198.4 163 65.0
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 9.8e-49 198.4 165 64.2
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 9.8e-49 198.4 163 65.0
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.8e-47 194.1 163 66.3
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 9.1e-47 191.8 163 61.3
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.6e-46 191.0 163 62.0
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 4.5e-46 189.5 163 60.7
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.3e-45 188.0 164 61.0
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 1.7e-45 187.6 164 63.4
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.9e-45 186.8 163 60.7
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.5e-44 184.5 163 64.4
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.5e-44 184.5 165 59.4
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 3.2e-44 183.3 165 58.8
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 5.5e-44 182.6 163 60.7
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.5e-44 182.6 163 60.1
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.1e-43 180.6 163 59.5
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 4.7e-43 179.5 163 58.9
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.7e-43 179.5 163 58.9
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 6.1e-43 179.1 163 60.7
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 2.3e-42 177.2 168 56.0
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 3.0e-42 176.8 170 54.7
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 4.0e-42 176.4 163 58.3
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 5.2e-42 176.0 166 57.2
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 8.8e-42 175.3 163 57.7
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 8.8e-42 175.3 165 57.0
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 1.2e-41 174.9 169 56.8
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 4.4e-41 172.9 166 56.0
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.7e-41 172.6 164 57.9
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.7e-41 172.6 164 57.9
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 9.8e-41 171.8 163 59.5
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.7e-40 171.0 165 54.5
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 6.3e-40 169.1 169 55.6
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 8.3e-40 168.7 165 57.0
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.1e-39 168.3 163 57.1
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.1e-39 168.3 164 56.1
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 2.4e-39 167.2 165 51.5
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 2.4e-39 167.2 172 55.8
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 3.1e-39 166.8 164 55.5
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 7.0e-39 165.6 164 54.9
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.2e-38 164.9 164 54.9
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 2.0e-38 164.1 173 54.3
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.0e-38 164.1 171 53.2
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.5e-38 163.3 164 54.3
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.3e-37 161.4 163 54.6
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 2.9e-37 160.2 166 57.8
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 4.7e-35 152.9 163 50.9
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 8.0e-35 152.1 163 52.1
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.0e-34 151.8 163 50.3
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.8e-34 151.0 167 50.9
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.0e-34 150.2 163 50.9
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 4.0e-34 149.8 163 49.7
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.5e-33 147.9 163 49.7
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 2.6e-33 147.1 164 50.0
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 5.7e-33 146.0 163 49.1
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.3e-32 144.8 163 50.3
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 8.3e-32 142.1 163 47.9
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 5.4e-31 139.4 163 49.7
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 9.2e-31 138.7 213 44.6
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 9.2e-31 138.7 163 49.7
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 2.0e-30 137.5 164 49.4
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.0e-30 137.5 163 49.1
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 2.7e-30 137.1 212 43.4
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 2.7e-30 137.1 189 46.0
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 3.5e-30 136.7 189 46.0
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 3.5e-30 136.7 189 46.0
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 3.5e-30 136.7 189 46.0
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.0e-29 135.2 169 47.3
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 2.9e-29 133.7 192 46.9
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 2.9e-29 133.7 163 52.1
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 3.9e-29 133.3 164 44.5
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.9e-29 133.3 157 48.4
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 8.6e-29 132.1 164 47.0
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 8.6e-29 132.1 140 57.9
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.9e-28 131.0 219 41.6
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 9.5e-28 128.6 164 48.8
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 1.2e-27 128.3 172 49.4
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.1e-27 127.5 164 47.6
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 2.8e-27 127.1 204 42.6
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 3.6e-27 126.7 165 41.2
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 3.6e-27 126.7 169 47.9
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 4.7e-27 126.3 190 43.7
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 8.0e-27 125.6 161 47.2
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 2.3e-26 124.0 162 46.3
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 2.3e-26 124.0 169 47.3
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 3.1e-26 123.6 164 41.5
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 3.1e-26 123.6 175 44.6
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 5.2e-26 122.9 165 43.0
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 6.8e-26 122.5 167 50.3
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 8.9e-26 122.1 190 44.2
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 8.9e-26 122.1 163 43.6
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.2e-25 121.7 190 43.2
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 1.2e-25 121.7 170 47.1
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.0e-25 120.9 165 47.3
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 2.0e-25 120.9 162 45.7
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 2.6e-25 120.6 192 42.7
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 4.4e-25 119.8 172 46.5
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 4.4e-25 119.8 165 41.2
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 5.8e-25 119.4 176 44.3
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 7.5e-25 119.0 158 48.1
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 8.3e-24 115.5 171 42.7
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.4e-23 114.0 165 44.8
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 7.0e-23 112.5 166 45.8
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 7.0e-23 112.5 165 43.0
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.2e-22 111.7 164 39.0
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.6e-22 111.3 152 47.4
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 6.0e-22 109.4 163 39.3
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 8.6e-21 105.5 157 44.6
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.1e-20 105.1 136 47.1
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.9e-20 104.4 160 45.6
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 2.5e-20 104.0 163 39.3
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 5.6e-20 102.8 164 43.9
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 3.6e-19 100.1 162 45.1
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 1.4e-18 98.2 164 37.8
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.8e-18 97.8 156 39.7
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 5.2e-18 96.3 192 38.5
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.2e-16 90.9 168 39.9
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.4e-15 88.2 155 38.7
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 1.9e-15 87.8 161 34.8
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 1.3e-13 81.6 167 35.3
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 6.6e-13 79.3 163 36.8
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 2.4e-07 60.8 166 27.7
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 9.2e-07 58.9 69 44.9
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 3.5e-06 57.0 159 28.3
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 4.6e-06 56.6 159 29.6


User provided reference genes

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