Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 4.6e-103 377.9 187 100.0
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 6.0e-103 377.5 187 99.5
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 2.4e-99 365.5 186 95.2
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 4.0e-99 364.8 187 94.7
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 5.3e-99 364.4 187 95.2
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.3e-99 364.4 187 95.2
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 5.3e-99 364.4 187 95.2
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 6.9e-99 364.0 187 93.6
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 6.9e-99 364.0 187 94.7
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 9.0e-99 363.6 187 93.6
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.2e-98 363.2 187 94.7
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.5e-98 362.8 187 94.1
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 1.5e-98 362.8 187 94.1
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 1.5e-98 362.8 187 94.7
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 2.6e-98 362.1 187 93.6
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 4.5e-98 361.3 187 93.0
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 5.8e-98 360.9 187 94.1
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 5.8e-98 360.9 187 93.6
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 7.6e-98 360.5 187 93.0
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 7.6e-98 360.5 187 93.0
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 7.6e-98 360.5 187 93.0
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.3e-97 359.8 187 93.0
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 1.7e-97 359.4 187 94.1
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.7e-97 359.4 187 93.0
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.7e-97 359.4 187 93.0
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 1.7e-97 359.4 187 93.0
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 92.0
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 2.2e-97 359.0 187 93.6
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 2.9e-97 358.6 187 92.5
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 3.8e-97 358.2 187 91.4
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 4.9e-97 357.8 187 91.4
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 8.4e-97 357.1 187 91.4
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 8.4e-97 357.1 187 92.0
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 8.4e-97 357.1 187 92.0
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 1.1e-96 356.7 187 90.9
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.9e-96 355.9 187 92.5
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 1.9e-96 355.9 187 90.9
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 1.9e-96 355.9 187 91.4
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.5e-96 355.5 182 94.5
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 92.5
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 92.5
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.5e-96 355.5 187 91.4
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.2e-96 355.1 200 89.0
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 90.9
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.2e-96 355.1 187 92.0
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 91.4
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 4.2e-96 354.8 184 93.5
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 4.2e-96 354.8 187 92.0
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 91.4
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 5.5e-96 354.4 187 90.4
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 91.4
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 7.1e-96 354.0 187 90.9
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 92.0
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 9.3e-96 353.6 187 90.9
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.2e-95 353.2 187 91.4
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 90.9
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 90.9
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.6e-95 352.8 187 90.9
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 2.1e-95 352.4 187 90.9
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 90.4
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 90.9
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 90.9
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 3.5e-95 351.7 196 89.3
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 3.5e-95 351.7 187 90.4
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.9
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.9
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 90.4
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 4.6e-95 351.3 187 91.4
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 6.0e-95 350.9 187 89.8
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.3
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 89.8
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.0e-94 350.1 187 90.9
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 1.3e-94 349.7 187 89.3
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 2.3e-94 349.0 187 89.8
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 88.8
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 3.0e-94 348.6 185 91.4
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 89.3
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 3.0e-94 348.6 187 89.8
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 89.3
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 3.9e-94 348.2 187 90.4
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 5.1e-94 347.8 187 88.8
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 6.7e-94 347.4 193 88.1
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 6.7e-94 347.4 187 89.8
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 8.7e-94 347.1 187 89.8
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.2
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.2
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.2
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 1.1e-93 346.7 187 88.2
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 1.1e-93 346.7 186 88.2
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.9e-93 345.9 187 89.3
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 2.5e-93 345.5 187 89.3
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 88.8
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 88.8
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 3.3e-93 345.1 187 87.7
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 4.3e-93 344.7 187 88.8
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 4.3e-93 344.7 186 90.3
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 5.7e-93 344.4 187 87.7
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 5.7e-93 344.4 187 88.2
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 2.1e-92 342.4 201 84.6
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.1e-92 342.4 187 87.2
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 2.1e-92 342.4 185 88.6
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 87.2
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 2.8e-92 342.0 187 87.7
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 4.8e-92 341.3 185 88.1
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 1.4e-91 339.7 187 87.7
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 1.8e-91 339.3 187 86.6
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 2.4e-91 339.0 187 84.5
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 4.1e-91 338.2 182 89.0
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 4.1e-91 338.2 182 89.0
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 4.1e-91 338.2 203 82.3
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 4.1e-91 338.2 206 81.6
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 5.3e-91 337.8 181 88.4
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 2.6e-90 335.5 206 80.6
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.6e-90 335.5 208 80.8
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 5.8e-90 334.3 187 87.2
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.0e-89 333.6 187 86.1
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 1.3e-89 333.2 186 84.4
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.4e-88 329.7 241 71.0
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 7.1e-88 327.4 183 85.8
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 2.5e-85 318.9 211 76.8
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 7.4e-85 317.4 173 86.7
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 4.8e-84 314.7 167 89.8
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 6.9e-83 310.8 169 87.0
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 1.0e-81 307.0 185 77.3
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 2.9e-81 305.4 187 77.5
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.5e-80 301.2 187 75.4
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.5e-80 301.2 187 75.4
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 7.9e-79 297.4 187 74.3
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 2.3e-78 295.8 187 80.2
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 1.1e-77 293.5 186 80.1
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.5e-77 293.1 187 77.5
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 7.4e-77 290.8 187 73.8
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.8e-76 288.9 172 77.3
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.7e-76 288.5 187 77.0
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 4.8e-76 288.1 154 89.0
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 3.1e-75 285.4 158 87.3
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 9.1e-75 283.9 187 77.0
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 9.1e-75 283.9 149 91.9
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.6e-74 282.3 180 73.9
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 1.6e-71 273.1 187 74.9
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.0e-70 270.4 148 87.8
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 1.8e-70 269.6 214 63.6
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 7.0e-67 257.7 158 78.5
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 1.5e-64 250.0 187 70.6
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 6.7e-62 241.1 173 64.2
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 3.3e-61 238.8 187 66.3
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.6e-58 229.9 124 88.7
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.0e-53 213.0 133 75.2
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.0e-53 213.0 103 97.1
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 5.9e-50 201.4 167 56.3
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.7e-49 199.9 98 93.9
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 6.5e-49 198.0 139 70.5
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 3.2e-48 195.7 175 53.7
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 2.7e-47 192.6 106 86.8
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 8.8e-46 187.6 181 59.1
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.5e-45 186.8 103 83.5
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 4.1e-43 178.7 98 82.7
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.5e-37 160.2 85 91.8
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 8.0e-31 137.9 142 56.3
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 7.5e-21 104.8 67 70.1
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.2e-18 97.4 52 96.2
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 7.8e-18 94.7 52 90.4
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 2.5e-16 89.7 49 91.8
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.8e-14 83.6 41 95.1
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 4.0e-14 82.4 47 85.1
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 2.6e-13 79.7 45 86.7
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.3e-12 77.4 70 61.4
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 2.2e-12 76.6 41 85.4
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 4.9e-12 75.5 68 55.9
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 1.9e-11 73.6 39 82.1


User provided reference genes

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