Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0281000 Salix brachista HOM05D003604 ORTHO05D004110 3.4e-126 454.9 217 100.0
Potri.011G130100 Populus trichocarpa HOM05D003604 ORTHO05D004110 1.5e-97 359.8 191 91.1
Sabra11G0117500 Salix brachista HOM05D003604 ORTHO05D004110 1.9e-92 342.8 227 77.5
Manes.14G113200 Manihot esculenta HOM05D003604 ORTHO05D004110 2.0e-89 332.8 191 83.2
Gohir.A13G142800 Gossypium hirsutum HOM05D003604 ORTHO05D004110 1.9e-84 316.2 196 78.6
Gorai.013G165200 Gossypium raimondii HOM05D003604 ORTHO05D004110 4.3e-84 315.1 196 78.1
Duzib213G0846 Durio zibethinus HOM05D003604 ORTHO05D004110 5.6e-84 314.7 196 78.6
Duzib268G0095 Durio zibethinus HOM05D003604 ORTHO05D004110 5.6e-84 314.7 196 78.6
PGR031G2944 Punica granatum HOM05D003604 ORTHO05D004110 1.6e-83 313.2 196 77.0
Hund23359 Selenicereus undatus HOM05D003604 ORTHO05D004110 2.1e-83 312.8 196 77.0
Eucgr.F03392 Eucalyptus grandis HOM05D003604 ORTHO05D004110 2.8e-83 312.4 196 77.6
Thecc.07G059200 Theobroma cacao HOM05D003604 ORTHO05D004110 2.8e-83 312.4 196 77.6
COL.COLO4_09536 Corchorus olitorius HOM05D003604 ORTHO05D004110 3.6e-83 312.0 196 77.6
CiPaw.11G180300 Carya illinoinensis HOM05D003604 ORTHO05D004110 1.0e-82 310.5 196 76.5
MD03G1215400 Malus domestica HOM05D003604 ORTHO05D004110 2.3e-82 309.3 196 76.5
Atru.chr2.3131 Acer truncatum HOM05D003604 ORTHO05D004110 3.1e-82 308.9 196 77.0
Prupe.4G197400 Prunus persica HOM05D003604 ORTHO05D004110 3.1e-82 308.9 196 78.1
Haze_09573 Corylus avellana HOM05D003604 ORTHO05D004110 4.0e-82 308.5 196 77.0
Gohir.D13G147400 Gossypium hirsutum HOM05D003604 ORTHO05D004110 4.0e-82 308.5 196 76.5
Dinv22327 Davidia involucrata HOM05D003604 ORTHO05D004110 5.2e-82 308.1 196 76.5
Gohir.D01G059000 Gossypium hirsutum HOM05D003604 ORTHO05D004110 6.8e-82 307.8 196 76.5
Gorai.002G080000 Gossypium raimondii HOM05D003604 ORTHO05D004110 6.8e-82 307.8 196 76.5
QL08p014504 Quercus lobata HOM05D003604 ORTHO05D004110 6.8e-82 307.8 196 76.5
Solyc09g005300.3 Solanum lycopersicum HOM05D003604 ORTHO05D004110 8.9e-82 307.4 191 75.4
Sopen03g037160 Solanum pennellii HOM05D003604 ORTHO05D004110 8.9e-82 307.4 191 75.4
Sopen09g001270 Solanum pennellii HOM05D003604 ORTHO05D004110 8.9e-82 307.4 191 75.4
arahy.Tifrunner.gnm1.ann1.B3WQY9 Arachis hypogaea HOM05D003604 ORTHO05D004110 1.2e-81 307.0 196 76.0
Sc03g0009420 Simmondsia chinensis HOM05D003604 ORTHO05D004110 1.2e-81 307.0 196 77.0
TAR624G0573 Trochodendron aralioides HOM05D003604 ORTHO05D004110 1.2e-81 307.0 196 77.0
MD11G1230000 Malus domestica HOM05D003604 ORTHO05D004110 1.5e-81 306.6 196 75.5
Solyc03g118250.4 Solanum lycopersicum HOM05D003604 ORTHO05D004110 1.5e-81 306.6 191 74.9
VMungo1127G0543 Vigna mungo HOM05D003604 ORTHO05D004110 2.0e-81 306.2 192 77.1
Lj8C164T0 Lonicera japonica HOM05D003604 ORTHO05D004110 2.6e-81 305.8 196 74.5
Nitab4.5_0000335g0020 Nicotiana tabacum HOM05D003604 ORTHO05D004110 2.6e-81 305.8 191 75.4
Nitab4.5_0000511g0020 Nicotiana tabacum HOM05D003604 ORTHO05D004110 2.6e-81 305.8 191 75.4
CANSAT11G1782 Cannabis sativa HOM05D003604 ORTHO05D004110 3.4e-81 305.4 191 77.5
Atru.chr2.3114 Acer truncatum HOM05D003604 ORTHO05D004110 4.4e-81 305.1 196 76.5
MELO3C018155.2 Cucumis melo HOM05D003604 ORTHO05D004110 5.8e-81 304.7 196 76.5
Cc05_g12990 Coffea canephora HOM05D003604 ORTHO05D004110 7.5e-81 304.3 191 74.9
FvH4_3g21511 Fragaria vesca HOM05D003604 ORTHO05D004110 7.5e-81 304.3 196 76.0
PGSC0003DMG400023083 Solanum tuberosum HOM05D003604 ORTHO05D004110 7.5e-81 304.3 191 74.9
GSVIVG01014550001 Vitis vinifera HOM05D003604 ORTHO05D004110 7.5e-81 304.3 191 76.4
RcHm_v2.0_Chr5g0036961 Rosa chinensis HOM05D003604 ORTHO05D004110 9.8e-81 303.9 196 76.0
CsaV3_3G022660 Cucumis sativus L. HOM05D003604 ORTHO05D004110 1.3e-80 303.5 195 76.4
Glyma.06G263000 Glycine max HOM05D003604 ORTHO05D004110 1.3e-80 303.5 191 76.4
CAN.G5.14 Capsicum annuum HOM05D003604 ORTHO05D004110 2.9e-80 302.4 191 74.9
Cpa.g.sc80.125 Carica papaya HOM05D003604 ORTHO05D004110 3.7e-80 302.0 196 75.0
Gohir.A01G072200 Gossypium hirsutum HOM05D003604 ORTHO05D004110 4.9e-80 301.6 196 75.0
Ciclev10008689m.g Citrus clementina HOM05D003604 ORTHO05D004110 6.4e-80 301.2 191 75.4
Hma1.2p1_0456F.1_g156560 Hydrangea macrophylla HOM05D003604 ORTHO05D004110 8.3e-80 300.8 197 75.1
CSS0036620 Camellia sinensis var. sinensis HOM05D003604 ORTHO05D004110 1.1e-79 300.4 191 74.3
CSS0043024 Camellia sinensis var. sinensis HOM05D003604 ORTHO05D004110 1.1e-79 300.4 191 74.3
Migut.H01877 Erythranthe guttata HOM05D003604 ORTHO05D004110 1.1e-79 300.4 196 74.0
Lj3g0004246 Lotus japonicus HOM05D003604 ORTHO05D004110 1.1e-79 300.4 196 74.0
Psat7g153240 Pisum sativum HOM05D003604 ORTHO05D004110 1.4e-79 300.1 196 74.5
Glyma.08G209500 Glycine max HOM05D003604 ORTHO05D004110 1.9e-79 299.7 191 74.3
SGA_v2.0_scaffold9G05001 Striga asiatica HOM05D003604 ORTHO05D004110 2.4e-79 299.3 196 74.5
Ca_26239_v3 Cicer arietinum L. HOM05D003604 ORTHO05D004110 3.2e-79 298.9 196 74.5
Ca_30045_v3 Cicer arietinum L. HOM05D003604 ORTHO05D004110 3.2e-79 298.9 196 74.5
Oeu060531.1 Olea europaea HOM05D003604 ORTHO05D004110 3.2e-79 298.9 196 74.0
TPR.G4607 Trifolium pratense HOM05D003604 ORTHO05D004110 3.2e-79 298.9 192 75.0
CAN.G843.15 Capsicum annuum HOM05D003604 ORTHO05D004110 5.4e-79 298.1 191 73.3
HanXRQChr13g0407501 Helianthus annuus HOM05D003604 ORTHO05D004110 5.4e-79 298.1 191 74.9
Lalb_Chr03g0030231 Lupinus albus HOM05D003604 ORTHO05D004110 5.4e-79 298.1 196 74.0
Nn2g10854 Nelumbo nucifera HOM05D003604 ORTHO05D004110 5.4e-79 298.1 191 75.9
TWI38G1923 Tripterygium wilfordii HOM05D003604 ORTHO05D004110 7.0e-79 297.7 196 76.0
Lj1g0019007 Lotus japonicus HOM05D003604 ORTHO05D004110 9.2e-79 297.4 193 74.6
Aa31LG10G3370 Aethionema arabicum HOM05D003604 ORTHO05D004110 1.2e-78 297.0 191 73.8
Oeu005439.1 Olea europaea HOM05D003604 ORTHO05D004110 1.2e-78 297.0 196 73.0
Sed0017338 Sechium edule HOM05D003604 ORTHO05D004110 1.2e-78 297.0 196 75.5
TAR626G0206 Trochodendron aralioides HOM05D003604 ORTHO05D004110 1.2e-78 297.0 198 72.7
Lalb_Chr01g0006251 Lupinus albus HOM05D003604 ORTHO05D004110 2.7e-78 295.8 196 74.5
Medtr6g003920 Medicago truncatula HOM05D003604 ORTHO05D004110 2.7e-78 295.8 192 74.5
BolC5t33080H Brassica oleracea HOM05D003604 ORTHO05D004110 3.5e-78 295.4 191 72.8
vmacro01905 Vaccinium macrocarpon HOM05D003604 ORTHO05D004110 3.5e-78 295.4 196 72.4
BcaB06g26132 Brassica carinata HOM05D003604 ORTHO05D004110 4.6e-78 295.0 191 72.8
BcaC05g28298 Brassica carinata HOM05D003604 ORTHO05D004110 4.6e-78 295.0 191 72.8
C05p43600 Brassica napus HOM05D003604 ORTHO05D004110 4.6e-78 295.0 191 72.8
DCAR_010007 Daucus carota HOM05D003604 ORTHO05D004110 6.0e-78 294.7 196 73.5
A05p28150 Brassica napus HOM05D003604 ORTHO05D004110 7.8e-78 294.3 196 72.4
Actinidia00329 Actinidia chinensis HOM05D003604 ORTHO05D004110 1.0e-77 293.9 196 73.0
BraA05t21698Z Brassica rapa HOM05D003604 ORTHO05D004110 1.0e-77 293.9 196 72.4
BcaB04g20641 Brassica carinata HOM05D003604 ORTHO05D004110 1.3e-77 293.5 196 71.4
CARHR096460 Cardamine hirsuta HOM05D003604 ORTHO05D004110 2.3e-77 292.7 191 72.3
Medtr7g110030 Medicago truncatula HOM05D003604 ORTHO05D004110 2.3e-77 292.7 192 74.0
Aqoxy1G03843 Aquilegia oxysepala HOM05D003604 ORTHO05D004110 3.0e-77 292.4 193 71.5
Carub.0003s2063 Capsella rubella HOM05D003604 ORTHO05D004110 3.0e-77 292.4 191 72.8
AUR62034817 Chenopodium quinoa HOM05D003604 ORTHO05D004110 3.0e-77 292.4 191 73.8
AT3G20650 Arabidopsis thaliana HOM05D003604 ORTHO05D004110 3.9e-77 292.0 191 71.7
CSS0042481 Camellia sinensis var. sinensis HOM05D003604 ORTHO05D004110 3.9e-77 292.0 196 72.4
Lsat_1_v5_gn_9_94841 Lactuca sativa HOM05D003604 ORTHO05D004110 3.9e-77 292.0 195 72.3
BcaC09g49007 Brassica carinata HOM05D003604 ORTHO05D004110 5.0e-77 291.6 196 70.9
C01p43560 Brassica napus HOM05D003604 ORTHO05D004110 5.0e-77 291.6 196 70.9
BolC1t04317H Brassica oleracea HOM05D003604 ORTHO05D004110 5.0e-77 291.6 196 70.9
BraA01t03518Z Brassica rapa HOM05D003604 ORTHO05D004110 5.0e-77 291.6 196 70.9
ECA240G0441 Erigeron canadensis HOM05D003604 ORTHO05D004110 5.0e-77 291.6 191 71.2
PSO832G4297 Papaver somniferum HOM05D003604 ORTHO05D004110 5.0e-77 291.6 191 73.3
RcHm_v2.0_Chr1g0332461 Rosa chinensis HOM05D003604 ORTHO05D004110 5.0e-77 291.6 191 75.4
Sp3g18690 Schrenkiella parvula HOM05D003604 ORTHO05D004110 5.0e-77 291.6 196 71.4
AL3G34530 Arabidopsis lyrata HOM05D003604 ORTHO05D004110 6.6e-77 291.2 191 71.7
A01p34140 Brassica napus HOM05D003604 ORTHO05D004110 6.6e-77 291.2 196 70.9
PSO210G6085 Papaver somniferum HOM05D003604 ORTHO05D004110 1.1e-76 290.4 191 72.8
EL10Ac4g08013 Beta vulgaris HOM05D003604 ORTHO05D004110 1.5e-76 290.0 191 72.8
Thhalv10020966m.g Eutrema salsugineum HOM05D003604 ORTHO05D004110 1.5e-76 290.0 191 72.8
Peaxi162Scf00141g00107 Petunia axillaris HOM05D003604 ORTHO05D004110 1.9e-76 289.7 162 82.1
arahy.Tifrunner.gnm1.ann1.R4IE40 Arachis hypogaea HOM05D003604 ORTHO05D004110 3.3e-76 288.9 161 83.9
Sed0007679 Sechium edule HOM05D003604 ORTHO05D004110 4.3e-76 288.5 162 84.6
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 7.3e-76 287.7 161 83.9
arahy.Tifrunner.gnm1.ann1.QJA41V Arachis hypogaea HOM05D003604 ORTHO05D004110 7.3e-76 287.7 161 83.9
AUR62029271 Chenopodium quinoa HOM05D003604 ORTHO05D004110 1.6e-75 286.6 196 71.4
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 2.8e-75 285.8 191 71.2
AUR62041148 Chenopodium quinoa HOM05D003604 ORTHO05D004110 4.7e-75 285.0 196 71.4
AUR62029554 Chenopodium quinoa HOM05D003604 ORTHO05D004110 6.2e-75 284.6 200 70.5
CDE05G1290 Ceratophyllum demersum HOM05D003604 ORTHO05D004110 2.3e-74 282.7 191 71.2
ClCG05G014980 Citrullus lanatus HOM05D003604 ORTHO05D004110 2.3e-74 282.7 149 87.2
AL1G58850 Arabidopsis lyrata HOM05D003604 ORTHO05D004110 5.2e-74 281.6 191 69.6
MBI18_g38395_MAGBIO Magnolia biondii HOM05D003604 ORTHO05D004110 6.8e-74 281.2 192 72.9
CiPaw.12G124800 Carya illinoinensis HOM05D003604 ORTHO05D004110 8.9e-74 280.8 196 71.4
CARHR041070 Cardamine hirsuta HOM05D003604 ORTHO05D004110 5.8e-73 278.1 191 69.1
Cfa020470 Carpinus fangiana HOM05D003604 ORTHO05D004110 6.4e-72 274.6 181 74.6
PGSC0003DMG402014244 Solanum tuberosum HOM05D003604 ORTHO05D004110 9.2e-71 270.8 181 71.8
THA.LOC104817889 Tarenaya hassleriana HOM05D003604 ORTHO05D004110 2.1e-70 269.6 191 68.6
ATR0721G088 Amborella trichopoda HOM05D003604 ORTHO05D004110 8.6e-69 264.2 191 68.6
HPP92_020594 Vanilla planifolia HOM05D003604 ORTHO05D004110 4.3e-68 261.9 191 67.5
arahy.Tifrunner.gnm1.ann1.6T0369 Arachis hypogaea HOM05D003604 ORTHO05D004110 7.3e-68 261.2 196 67.9
PSO541G3797 Papaver somniferum HOM05D003604 ORTHO05D004110 1.6e-67 260.0 153 78.4
SHI31882 Sapria himalayana HOM05D003604 ORTHO05D004110 2.1e-67 259.6 152 78.3
Os08g0180000 Oryza sativa ssp. japonica HOM05D003604 ORTHO05D004110 3.6e-67 258.8 183 70.5
PSO675G0229 Papaver somniferum HOM05D003604 ORTHO05D004110 1.4e-66 256.9 153 77.1
Zm00001eb054690 Zea mays HOM05D003604 ORTHO05D004110 1.4e-66 256.9 147 81.6
Pp3c23_20110 Physcomitrium patens HOM05D003604 ORTHO05D004110 2.5e-60 236.1 152 69.1
Mapoly0053s0007 Marchantia polymorpha HOM05D003604 ORTHO05D004110 1.2e-59 233.8 176 63.1
FvH4_1g24790 Fragaria vesca HOM05D003604 ORTHO05D004110 1.6e-59 233.4 157 70.7
FAN19G0122 Fragaria x ananassa HOM05D003604 ORTHO05D004110 1.6e-59 233.4 157 70.7
FAN19G2257 Fragaria x ananassa HOM05D003604 ORTHO05D004110 1.6e-59 233.4 157 70.7
FvH4_1g24830 Fragaria vesca HOM05D003604 ORTHO05D004110 6.2e-59 231.5 157 70.1
FvH4_2g07500 Fragaria vesca HOM05D003604 ORTHO05D004110 3.1e-58 229.2 165 68.5
FAN24G0344 Fragaria x ananassa HOM05D003604 ORTHO05D004110 5.2e-58 228.4 148 73.6
AagrBONN_evm.TU.Sc2ySwM_362.2832 Anthoceros agrestis HOM05D003604 ORTHO05D004110 2.0e-57 226.5 154 68.2
FAN11G1546 Fragaria x ananassa HOM05D000073 ORTHO05D004110 2.0e-57 226.5 126 82.5
FAN25G2942 Fragaria x ananassa HOM05D000073 ORTHO05D004110 2.0e-57 226.5 126 82.5
FAN24G1060 Fragaria x ananassa HOM05D003604 ORTHO05D004110 2.6e-57 226.1 165 66.7
FvH4_2g07550 Fragaria vesca HOM05D003604 ORTHO05D004110 4.9e-56 221.9 165 67.3
FvH4_2g07580 Fragaria vesca HOM05D003604 ORTHO05D004110 4.9e-56 221.9 165 67.3
FAN15G1062 Fragaria x ananassa HOM05D003604 ORTHO05D004110 4.9e-56 221.9 165 67.3
FAN22G2085 Fragaria x ananassa HOM05D003604 ORTHO05D004110 4.9e-56 221.9 165 67.3
FAN15G2058 Fragaria x ananassa HOM05D003604 ORTHO05D004110 1.1e-55 220.7 165 66.7
FAN24G2186 Fragaria x ananassa HOM05D003604 ORTHO05D004110 1.9e-55 219.9 165 66.7
Phvul.011G146000 Phaseolus vulgaris HOM05D003604 ORTHO05D004110 6.0e-54 214.9 191 60.2
CBR_g12774 Chara braunii HOM05D003604 ORTHO05D004110 1.1e-50 204.1 139 65.5
FvH4_6g24821 Fragaria vesca HOM05D003604 ORTHO05D004110 1.4e-50 203.8 103 88.3
FvH4_2g07560 Fragaria vesca HOM05D003604 ORTHO05D004110 7.1e-47 191.4 152 64.5
FvH4_2g07570 Fragaria vesca HOM05D003604 ORTHO05D004110 7.1e-47 191.4 152 64.5
DCAR_022503 Daucus carota HOM05D003604 ORTHO05D004110 2.1e-46 189.9 124 74.2
SMO266G0094 Selaginella moellendorffii HOM05D003604 ORTHO05D004110 1.0e-45 187.6 159 57.2
SalBow7G3912 Salvia bowleyana HOM05D003604 ORTHO05D004110 5.8e-41 171.8 129 69.0
PRCOL_00001408 Prasinoderma coloniale HOM05D003604 ORTHO05D004110 1.2e-38 164.1 144 54.9
MCO04G471 Micromonas commoda HOM05D003604 ORTHO05D004110 1.0e-32 144.4 146 50.0
FAN16G3577 Fragaria x ananassa HOM05D003604 ORTHO05D004110 8.4e-32 141.4 68 89.7
GSVIVG01018836001 Vitis vinifera HOM05D003604 ORTHO05D004110 1.1e-31 141.0 173 49.1
SalBow7G1717 Salvia bowleyana HOM05D003604 ORTHO05D004110 7.1e-31 138.3 72 83.3
AagrBONN_evm.TU.Sc2ySwM_228.4281 Anthoceros agrestis HOM05D003604 ORTHO05D004110 1.1e-28 131.0 89 65.2
Manes.06G031600 Manihot esculenta HOM05D003604 ORTHO05D004110 3.1e-26 122.9 68 79.4
BcaC03g16005 Brassica carinata HOM05D003604 ORTHO05D004110 1.6e-22 110.5 85 63.5
SEGI_38117 Sequoiadendron giganteum HOM05D003604 ORTHO05D004110 1.6e-22 110.5 99 59.6
A09p03180 Brassica napus HOM05D003604 ORTHO05D004110 8.7e-21 104.8 92 56.5
BcaC05g28687 Brassica carinata HOM05D003604 ORTHO05D004110 7.4e-20 101.7 61 75.4
BolC5t33544H Brassica oleracea HOM05D003604 ORTHO05D004110 3.7e-19 99.4 63 71.4
FvH4_2g07650 Fragaria vesca HOM05D003604 ORTHO05D004110 9.1e-18 94.7 73 63.0
FAN23G2626 Fragaria x ananassa HOM05D003604 ORTHO05D004110 2.6e-17 93.2 102 47.1
SMO351G0048 Selaginella moellendorffii HOM05D003604 ORTHO05D004110 1.0e-16 91.3 151 31.8
RcHm_v2.0_Chr6g0247051 Rosa chinensis HOM05D003604 ORTHO05D004110 6.5e-16 88.6 48 83.3
Cre03.g204752 Chlamydomonas reinhardtii HOM05D003604 ORTHO05D004110 6.7e-13 78.6 165 30.3
Cfa025063 Carpinus fangiana HOM05D000575 ORTHO05D126414 1.5e-12 77.4 195 30.3
A05p02960 Brassica napus HOM05D003604 ORTHO05D016132 1.4e-10 70.9 40 80.0
BraA07t29088Z Brassica rapa HOM05D003604 ORTHO05D016132 1.4e-10 70.9 40 80.0
Mapoly0132s0017 Marchantia polymorpha HOM05D004957 ORTHO05D006741 3.8e-08 62.8 121 28.1
BolC5t29949H Brassica oleracea HOM05D003431 ORTHO05D005152 2.5e-07 60.1 34 70.6
Atru.chr12.947 Acer truncatum HOM05D004957 ORTHO05D006741 2.7e-06 56.6 120 27.5
Dinv20853 Davidia involucrata HOM05D004957 ORTHO05D006741 6.1e-06 55.5 122 31.1


User provided reference genes

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