Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 1.3e-192 676.4 376 100.0
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 3.4e-153 545.4 376 83.5
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 5.0e-149 531.6 422 76.5
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 7.8e-118 427.9 378 67.7
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 2.8e-115 419.5 375 68.0
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 8.4e-112 407.9 377 66.6
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 4.2e-111 405.6 369 62.9
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.2e-110 404.1 374 66.3
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.3e-109 400.6 377 65.5
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.9e-108 396.7 372 66.4
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 3.3e-108 396.0 377 65.0
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.3e-107 394.0 377 65.8
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 7.6e-105 384.8 376 63.0
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 2.9e-104 382.9 376 63.3
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 8.4e-104 381.3 380 62.9
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 1.9e-103 380.2 385 61.6
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 3.2e-103 379.4 376 62.2
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.6e-102 375.6 372 60.5
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 6.0e-102 375.2 372 61.3
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 6.0e-102 375.2 379 61.7
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 7.9e-102 374.8 380 60.8
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.0e-101 374.4 372 59.7
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.7e-101 373.6 372 60.2
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 5.1e-101 372.1 376 63.8
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 1.1e-100 370.9 366 61.5
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.5e-100 370.5 417 55.6
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 2.5e-100 369.8 381 59.1
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 5.6e-100 368.6 354 59.9
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.6e-99 367.1 377 60.7
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 2.1e-99 366.7 396 58.8
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 2.1e-99 366.7 375 60.5
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 4.8e-99 365.5 350 65.7
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 6.9e-98 361.7 378 60.8
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.5e-97 360.5 378 57.9
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.6e-97 359.8 367 57.8
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 4.5e-97 359.0 373 59.8
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 9.9e-97 357.8 383 58.7
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 9.9e-97 357.8 378 60.3
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.7e-96 357.1 377 58.6
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.1e-95 354.4 314 68.8
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 5.5e-95 352.1 379 59.4
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 7.1e-95 351.7 369 57.2
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.2e-94 350.9 379 59.9
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.1e-94 350.1 360 58.3
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 4.6e-94 349.0 396 57.3
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.0e-93 347.8 378 57.7
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.0e-93 347.8 357 63.0
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.3e-93 347.4 357 58.0
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.3e-93 347.4 378 57.4
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.1e-93 345.5 356 58.1
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.5e-92 344.0 376 57.7
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.5e-92 344.0 376 57.7
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.9e-92 343.6 376 57.2
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 2.5e-92 343.2 392 57.7
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 5.6e-92 342.0 376 57.2
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 5.6e-92 342.0 376 58.0
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.3e-91 340.9 372 58.3
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.8e-90 337.0 314 64.3
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 3.1e-90 336.3 372 58.1
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 4.5e-89 332.4 384 54.2
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 5.8e-89 332.0 383 54.3
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 1.0e-88 331.3 392 57.1
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.7e-88 330.5 388 55.2
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 4.9e-88 328.9 376 55.1
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.1e-87 327.8 372 56.7
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.5e-87 326.6 372 56.7
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 9.3e-87 324.7 345 59.4
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 1.6e-86 323.9 312 66.0
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.1e-86 323.6 397 55.7
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 7.9e-86 321.6 294 64.6
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 3.9e-85 319.3 380 55.5
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.6e-83 313.9 397 54.9
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.5e-81 307.4 406 54.2
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 4.5e-81 305.8 378 52.4
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 2.9e-80 303.1 426 51.2
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 2.5e-79 300.1 367 57.5
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 6.1e-78 295.4 380 50.3
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 6.1e-78 295.4 368 55.2
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 1.3e-77 294.3 315 61.3
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 3.9e-77 292.7 380 51.8
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 2.5e-76 290.0 369 50.4
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.3e-75 287.7 374 53.2
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 5.3e-74 282.3 369 50.7
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 2.5e-71 273.5 372 46.0
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 3.2e-71 273.1 377 50.1
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 6.7e-69 265.4 378 50.5
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 8.8e-69 265.0 374 48.9
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 8.8e-69 265.0 379 51.2
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 5.3e-66 255.8 324 55.2
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.0e-65 253.8 237 70.5
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 8.2e-59 231.9 244 65.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 3.8e-56 223.0 388 43.3
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.5e-55 221.1 385 43.6
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.7e-54 216.9 254 60.2
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 6.1e-54 215.7 318 50.6
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 6.3e-51 205.7 340 42.4
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.0e-49 200.7 291 51.5
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.9e-48 196.8 356 40.2
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 4.2e-47 193.0 317 47.0
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 6.1e-46 189.1 429 38.5
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.1e-42 178.3 166 62.0
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.6e-41 174.5 194 52.1
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 3.2e-39 166.8 189 55.6
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 2.3e-37 160.6 290 39.3
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.7e-36 156.0 173 52.6
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 2.7e-33 147.1 96 83.3
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 3.5e-33 146.7 359 37.0
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 2.5e-31 140.6 196 55.1
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 3.6e-22 110.2 70 85.7
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 9.8e-20 102.1 62 85.5
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.4e-18 97.4 169 46.2
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 5.4e-18 96.3 169 45.6
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.4e-13 81.6 66 71.2
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 1.4e-13 81.6 87 60.9
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 4.0e-13 80.1 324 31.5
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 8.3e-11 72.4 302 33.1
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 2.4e-10 70.9 137 35.8
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.6e-09 68.2 121 44.6
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 2.1e-09 67.8 37 78.4


User provided reference genes

Program Settings