Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 3.9e-191 671.4 358 100.0
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 1.7e-186 656.0 358 98.0
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 1.1e-169 600.1 363 87.9
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 9.1e-132 474.2 363 70.5
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 8.8e-127 457.6 363 66.7
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 1.7e-125 453.4 365 66.8
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 1.2e-123 447.2 360 66.7
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 7.7e-123 444.5 363 63.1
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.7e-122 443.4 363 63.6
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 2.2e-122 443.0 366 65.6
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 6.5e-122 441.4 300 78.3
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 1.6e-120 436.8 358 64.2
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 1.6e-120 436.8 364 62.9
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 4.4e-118 428.7 365 63.6
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 7.4e-118 427.9 362 61.3
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 1.7e-117 426.8 363 61.4
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 2.2e-117 426.4 406 56.7
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 1.4e-116 423.7 362 63.0
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 1.4e-116 423.7 362 61.0
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 2.4e-116 422.9 363 61.2
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 2.4e-116 422.9 362 61.6
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 2.4e-116 422.9 367 60.5
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 4.1e-116 422.2 362 63.0
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 2.6e-115 419.5 363 61.4
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 3.5e-115 419.1 354 62.4
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 5.9e-115 418.3 358 61.5
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 1.0e-114 417.5 362 60.5
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 2.2e-114 416.4 357 62.7
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 2.9e-114 416.0 362 63.3
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 5.0e-114 415.2 361 61.2
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 5.0e-114 415.2 368 61.1
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 1.1e-113 414.1 361 61.5
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 1.5e-113 413.7 364 61.0
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.5e-113 413.7 358 60.9
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 3.2e-113 412.5 355 63.7
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 4.2e-113 412.1 358 60.3
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 9.4e-113 411.0 358 60.1
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 9.4e-113 411.0 358 60.1
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 1.2e-112 410.6 358 59.8
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 2.1e-112 409.8 366 59.6
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 3.6e-112 409.1 361 60.7
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 6.1e-112 408.3 365 60.8
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 1.4e-111 407.1 357 60.5
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.8e-111 406.8 361 60.4
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 5.2e-111 405.2 364 59.1
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 8.8e-111 404.4 360 59.2
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 1.5e-110 403.7 340 63.8
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.5e-110 403.7 358 58.9
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 1.5e-110 403.7 360 60.3
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 3.3e-110 402.5 364 60.4
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 2.2e-109 399.8 363 59.0
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 2.8e-109 399.4 364 59.1
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 1.1e-108 397.5 364 59.3
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 4.1e-108 395.6 350 60.0
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 1.2e-107 394.0 364 58.0
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 6.5e-106 388.3 366 57.9
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 2.5e-105 386.3 353 60.1
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 3.2e-105 386.0 357 58.8
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 7.2e-105 384.8 320 64.4
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 3.6e-104 382.5 426 51.6
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 6.1e-104 381.7 345 59.1
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 1.5e-102 377.1 361 58.4
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 1.5e-102 377.1 408 54.4
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 2.0e-102 376.7 338 59.2
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 2.8e-101 372.9 357 55.7
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 4.8e-101 372.1 340 60.3
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 4.1e-100 369.0 361 53.7
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 5.4e-100 368.6 361 54.8
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 1.2e-99 367.5 365 54.8
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 1.2e-99 367.5 357 56.3
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 1.2e-99 367.5 360 55.8
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.0e-98 364.4 357 55.5
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 8.6e-98 361.3 387 52.7
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.9e-97 360.1 358 54.7
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 1.9e-97 360.1 359 55.2
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 2.5e-97 359.8 361 55.4
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.6e-96 357.1 358 55.3
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 2.1e-96 356.7 358 55.0
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.1e-96 356.7 363 54.3
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 2.8e-96 356.3 354 53.7
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.6e-96 355.9 358 54.2
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 4.7e-96 355.5 302 64.2
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 4.7e-96 355.5 365 55.6
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 3.0e-95 352.8 360 54.2
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 4.0e-95 352.4 359 54.6
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 8.9e-95 351.3 358 54.5
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 1.2e-94 350.9 368 54.1
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 1.5e-94 350.5 358 53.9
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 2.6e-94 349.7 368 52.7
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 1.7e-93 347.1 359 54.3
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.7e-93 347.1 360 53.1
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.7e-93 347.1 370 51.1
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 4.1e-92 342.4 359 51.5
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.6e-91 340.5 359 54.0
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 3.8e-90 335.9 360 51.9
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 6.6e-90 335.1 360 51.9
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.1e-89 334.3 359 51.5
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 1.1e-89 334.3 295 63.1
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 2.1e-88 330.1 360 51.7
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 8.0e-88 328.2 300 59.7
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 1.2e-86 324.3 306 58.8
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.6e-86 323.2 357 51.5
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 1.6e-83 313.9 351 50.4
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 6.0e-83 312.0 281 62.6
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 1.3e-82 310.8 312 56.1
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.3e-82 310.8 345 51.3
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 8.6e-82 308.1 346 50.3
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 3.4e-78 296.2 357 45.1
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 3.5e-75 286.2 366 45.1
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 1.3e-74 284.3 355 48.2
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 4.7e-72 275.8 272 57.4
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 4.7e-72 275.8 284 53.5
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 6.2e-72 275.4 375 42.9
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 2.0e-70 270.4 356 45.8
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 4.4e-70 269.2 357 42.3
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 7.5e-70 268.5 238 60.1
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 8.3e-69 265.0 246 60.6
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 6.2e-64 248.8 342 43.6
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.1e-63 246.5 342 42.4
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 3.4e-62 243.0 240 57.5
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 3.2e-60 236.5 230 57.8
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 3.0e-58 229.9 350 40.6
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 5.8e-54 215.7 343 38.2
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 5.1e-50 202.6 273 45.8
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.1e-49 201.4 228 50.0
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.1e-47 194.9 237 50.2
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 1.3e-45 188.0 314 39.5
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 5.4e-44 182.6 298 37.6
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 4.6e-43 179.5 354 35.0
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 4.5e-38 162.9 128 64.8
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 5.5e-36 156.0 446 27.8
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 8.7e-34 148.7 186 47.3
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 9.6e-33 145.2 131 56.5
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 7.1e-28 129.0 373 29.0
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 4.8e-24 116.3 153 49.0
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 1.2e-19 101.7 163 36.2
MSTRG.15906 Avicennia marina HOM05D005473 ORTHO05D006543 5.0e-13 79.7 55 65.5
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis HOM05D005473 ORTHO05D006543 1.1e-12 78.6 194 33.5
MD13G1032300 Malus domestica HOM05D005473 ORTHO05D006543 5.5e-12 76.3 56 62.5
MD16G1034500 Malus domestica HOM05D005473 ORTHO05D006543 9.4e-12 75.5 56 62.5
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 1.4e-10 71.6 149 33.6
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 3.3e-09 67.0 344 21.8


User provided reference genes

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