Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 5.7e-55 217.2 103 100.0
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 9.2e-53 209.9 103 96.1
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-42 176.0 95 82.1
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-39 165.6 95 81.1
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 4.4e-39 164.5 95 78.9
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 9.8e-39 163.3 95 77.9
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.2e-33 146.4 93 68.8
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.9e-26 122.5 89 66.3
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.9e-19 98.2 93 47.3
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-19 97.8 86 50.0
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 1.5e-15 86.3 91 42.9
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-14 82.4 97 43.3
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.4e-14 80.9 93 39.8
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.4e-13 77.8 82 48.8
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.4e-13 77.8 82 48.8
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.4e-13 77.8 82 48.8
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.4e-13 77.8 90 41.1
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 1.6e-12 76.3 84 42.9
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 2.1e-12 75.9 91 38.5
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.5e-12 75.1 85 42.4
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.6e-12 74.7 83 43.4
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.0e-12 74.3 88 39.8
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.8e-12 73.9 83 41.0
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.8e-12 73.9 97 41.2
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-11 73.6 95 37.9
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.0e-11 73.6 88 40.9
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-11 72.8 87 41.4
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.3e-11 72.4 93 40.9
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.3e-11 72.4 91 39.6
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-11 72.4 81 48.1
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.0e-11 72.0 81 46.9
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.9e-11 71.6 83 41.0
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.9e-11 71.6 83 42.2
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.9e-11 71.6 92 39.1
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.9e-11 71.6 96 40.6
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.9e-11 71.6 88 39.8
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 5.1e-11 71.2 90 42.2
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-11 71.2 90 37.8
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.7e-11 70.5 83 41.0
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.7e-11 70.5 83 39.8
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-10 70.1 83 39.8
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-10 70.1 94 37.2
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-10 70.1 84 44.0
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.5e-10 69.7 83 44.6
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 1.5e-10 69.7 101 37.6
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-10 68.9 72 40.3
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 2.5e-10 68.9 90 41.1
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.3e-10 68.6 89 38.2
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-10 68.6 89 39.3
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-10 68.2 84 42.9
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.6e-10 67.8 98 37.8
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 7.3e-10 67.4 89 47.2
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.3e-10 67.4 86 38.4
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 7.3e-10 67.4 89 38.2
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 7.3e-10 67.4 81 46.9
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 9.6e-10 67.0 90 35.6
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 9.6e-10 67.0 90 36.7
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.3e-09 66.6 94 37.2
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-09 66.6 89 37.1
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-09 66.6 86 38.4
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-09 66.2 87 39.1
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.1e-09 65.9 92 35.9
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 2.1e-09 65.9 88 37.5
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 3.6e-09 65.1 89 39.3
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 3.6e-09 65.1 88 36.4
Atru.chr2.63 Acer truncatum HOM05D002599 ORTHO05D001895 4.8e-09 64.7 92 33.7
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.8e-09 64.7 82 39.0
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 6.2e-09 64.3 86 38.4
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.1e-09 63.9 82 39.0
Manes.07G021500 Manihot esculenta HOM05D002599 ORTHO05D001895 8.1e-09 63.9 90 42.2
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 8.1e-09 63.9 82 39.0
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.1e-09 63.9 82 39.0
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 85 35.3
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 82 39.0
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-08 63.5 92 35.9
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-08 63.5 82 39.0
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.1e-08 63.5 88 36.4
Atru.chr2.68 Acer truncatum HOM05D002599 ORTHO05D001895 1.4e-08 63.2 100 34.0
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-08 63.2 89 38.2
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 1.4e-08 63.2 89 34.8
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-08 62.8 86 39.5
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.8e-08 62.8 96 36.5
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.8e-08 62.8 89 33.7
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-08 62.8 82 39.0
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-08 62.8 86 37.2
Atru.chr2.65 Acer truncatum HOM05D002599 ORTHO05D001895 2.4e-08 62.4 101 32.7
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-08 62.4 86 40.7
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-08 62.4 88 37.5
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-08 62.0 80 40.0
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.0e-08 61.6 89 31.5
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.0e-08 61.6 92 34.8
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-08 61.2 89 34.8
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-08 61.2 89 34.8
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-08 61.2 89 34.8
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 6.9e-08 60.8 97 40.2
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.9e-08 60.8 85 35.3
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.9e-08 60.8 85 35.3
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.9e-08 60.8 89 33.7
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.0e-08 60.5 92 35.9
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 9.0e-08 60.5 89 34.8
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 9.0e-08 60.5 89 34.8
Ah.12g052760 Amaranthus hybridus HOM05D002599 ORTHO05D001895 1.2e-07 60.1 95 40.0
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-07 60.1 87 37.9
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 1.2e-07 60.1 90 34.4
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-07 60.1 89 33.7
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-07 60.1 84 35.7
Atru.chr2.66 Acer truncatum HOM05D002599 ORTHO05D001895 1.5e-07 59.7 100 33.0
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.5e-07 59.7 88 37.5
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-07 59.7 86 34.9
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-07 59.7 89 34.8
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-07 59.7 87 35.6
Thecc.02G024900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-07 59.7 96 35.4
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 2.0e-07 59.3 86 38.4
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 2.0e-07 59.3 86 38.4
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 2.0e-07 59.3 86 38.4
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-07 59.3 87 36.8
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-07 59.3 89 34.8
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-07 59.3 89 34.8
Ciclev10003864m.g Citrus clementina HOM05D022543 ORTHO05D001895 2.6e-07 58.9 87 37.9
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-07 58.9 84 36.9
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 2.6e-07 58.9 87 37.9
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 2.6e-07 58.9 82 34.1
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.4e-07 58.5 90 36.7
COL.COLO4_25715 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.4e-07 58.5 83 32.5
Gohir.D02G213300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.4e-07 58.5 64 40.6
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 3.4e-07 58.5 82 36.6
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-07 58.5 89 33.7
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-07 58.5 89 33.7
Lsat_1_v5_gn_1_78300 Lactuca sativa HOM05D000466 ORTHO05D000331 4.5e-07 58.2 97 36.1
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.5e-07 58.2 81 37.0
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 4.5e-07 58.2 89 33.7
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 5.8e-07 57.8 88 38.6
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 7.6e-07 57.4 89 36.0
Gohir.D02G213400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.6e-07 57.4 64 39.1
Ah.02g127100 Amaranthus hybridus HOM05D000466 ORTHO05D000331 9.9e-07 57.0 100 37.0
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.9e-07 57.0 81 34.6
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-06 56.6 82 35.4
MSTRG.2038 Avicennia marina HOM05D000466 ORTHO05D000331 1.7e-06 56.2 95 33.7
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 1.7e-06 56.2 82 40.2
CARHR250180 Cardamine hirsuta HOM05D000466 ORTHO05D000331 2.2e-06 55.8 94 36.2
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-06 55.8 81 35.8
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.2e-06 55.8 82 37.8
PSO339G0187 Papaver somniferum HOM05D000466 ORTHO05D000331 2.2e-06 55.8 95 34.7
PSO801G0845 Papaver somniferum HOM05D000466 ORTHO05D000331 2.2e-06 55.8 95 34.7
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-06 55.8 82 31.7
HPP92_024718 Vanilla planifolia HOM05D000466 ORTHO05D000331 2.2e-06 55.8 90 38.9
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.9e-06 55.5 82 37.8
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.9e-06 55.5 82 31.7
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.9e-06 55.5 89 32.6
Sopen08g031590 Solanum pennellii HOM05D000466 ORTHO05D000331 3.8e-06 55.1 94 35.1
Os03g0120900 Oryza sativa ssp. japonica HOM05D000466 ORTHO05D000331 4.9e-06 54.7 103 32.0
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.9e-06 54.7 83 36.1
Prupe.8G119000 Prunus persica HOM05D018000 ORTHO05D017022 4.9e-06 54.7 85 36.5
Solyc10g083210.2 Solanum lycopersicum HOM05D000466 ORTHO05D000331 4.9e-06 54.7 102 34.3
Sopen10g032690 Solanum pennellii HOM05D000466 ORTHO05D000331 4.9e-06 54.7 102 34.3
PGSC0003DMG400028159 Solanum tuberosum HOM05D000466 ORTHO05D000331 4.9e-06 54.7 102 34.3
Aa31LG7G8940 Aethionema arabicum HOM05D000466 ORTHO05D000331 6.4e-06 54.3 87 36.8
CiPaw.12G074600 Carya illinoinensis HOM05D000466 ORTHO05D000331 6.4e-06 54.3 95 33.7
FvH4_5g10410 Fragaria vesca HOM05D000466 ORTHO05D000331 6.4e-06 54.3 95 33.7
FAN04G2269 Fragaria x ananassa HOM05D000466 ORTHO05D000331 6.4e-06 54.3 95 33.7
FAN13G0451 Fragaria x ananassa HOM05D000466 ORTHO05D000331 6.4e-06 54.3 95 33.7
FAN18G1747 Fragaria x ananassa HOM05D000466 ORTHO05D000331 6.4e-06 54.3 95 33.7
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 6.4e-06 54.3 90 35.6
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.4e-06 53.9 95 32.6
Os02g0683500 Oryza sativa ssp. japonica HOM05D000466 ORTHO05D000331 8.4e-06 53.9 95 33.7
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 8.4e-06 53.9 87 35.6
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 8.4e-06 53.9 86 34.9


User provided reference genes

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