Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 0.0e+00 1137.9 556 100.0
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.6e-220 769.6 538 74.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.0e-214 750.4 540 71.3
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 3.0e-198 695.7 540 65.2
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.4e-195 686.0 540 63.9
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 4.0e-195 685.3 538 63.9
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 5.2e-195 684.9 540 64.1
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 8.9e-195 684.1 535 64.7
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.0e-194 682.9 540 63.7
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 1.3e-193 680.2 540 63.5
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 3.5e-191 672.2 540 62.4
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 4.6e-191 671.8 540 62.6
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 7.8e-191 671.0 536 63.1
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.0e-190 670.6 540 62.8
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 3.9e-190 668.7 540 63.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 5.1e-190 668.3 540 62.2
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 6.6e-190 667.9 535 62.8
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.3e-189 665.6 540 62.2
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 4.3e-189 665.2 538 62.5
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 5.6e-189 664.8 537 62.0
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.6e-188 663.3 540 61.5
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.1e-188 662.9 541 62.8
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.1e-188 662.9 540 61.3
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 3.6e-188 662.1 541 62.5
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 6.2e-188 661.4 537 61.8
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 5.3e-187 658.3 541 61.6
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 9.0e-187 657.5 541 61.6
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 5.8e-186 654.8 541 60.6
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 7.6e-186 654.4 541 60.6
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 9.9e-186 654.1 541 60.4
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.2e-185 652.9 551 60.6
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 7.1e-184 647.9 540 60.9
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.6e-183 646.7 540 60.6
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 7.9e-183 644.4 536 60.1
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.8e-182 643.3 533 61.2
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 3.9e-182 642.1 545 59.1
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 2.5e-181 639.4 540 59.3
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 3.3e-181 639.0 541 59.3
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 4.3e-181 638.6 536 59.5
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 2.1e-180 636.3 537 60.7
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 3.6e-180 635.6 540 59.8
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 8.1e-180 634.4 540 59.3
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 8.1e-180 634.4 540 58.1
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 8.1e-180 634.4 540 58.0
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.1e-179 634.0 536 59.3
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 1.8e-179 633.3 541 59.1
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 9.0e-179 630.9 540 58.9
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 7.6e-178 627.9 541 58.2
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.3e-177 627.1 540 58.3
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 2.9e-177 625.9 540 58.9
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 2.9e-177 625.9 540 59.6
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 3.8e-177 625.5 540 58.5
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 4.9e-177 625.2 540 58.5
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.1e-176 624.0 540 58.3
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.9e-176 623.2 540 58.5
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.9e-176 623.2 540 58.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.9e-176 623.2 536 59.5
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 4.2e-176 622.1 540 58.3
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.3e-174 617.1 541 56.2
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 1.3e-174 617.1 566 56.4
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.8e-174 616.7 535 58.9
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.5e-173 613.6 541 58.4
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 5.6e-173 611.7 540 57.4
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 5.6e-173 611.7 547 55.9
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 1.3e-172 610.5 530 58.7
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 8.1e-172 607.8 541 57.7
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.8e-171 606.7 544 55.0
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 3.1e-171 605.9 540 57.4
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 4.0e-171 605.5 541 57.5
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 9.0e-171 604.4 543 57.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 2.0e-170 603.2 542 56.1
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 7.6e-170 601.3 540 55.6
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.7e-169 600.1 541 57.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 2.2e-169 599.7 540 55.2
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 8.4e-169 597.8 540 56.3
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.4e-168 597.0 523 56.8
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 6.0e-167 591.7 540 54.8
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.9e-165 586.6 540 53.5
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.4e-162 575.9 557 54.0
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 2.9e-161 572.8 574 53.1
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 4.6e-159 565.5 570 53.5
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 5.3e-155 552.0 521 53.0
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 9.1e-155 551.2 526 54.8
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.1e-152 544.3 540 53.0
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.7e-148 530.4 532 49.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 4.1e-147 525.8 404 65.3
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 7.9e-143 511.5 514 52.3
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 3.1e-139 499.6 425 58.6
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 5.3e-139 498.8 529 50.9
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 9.1e-139 498.0 492 54.1
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 2.9e-137 493.0 512 50.2
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 5.5e-128 462.2 429 56.2
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 8.8e-126 454.9 429 54.1
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 3.1e-123 446.4 540 47.6
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.1e-94 351.7 243 67.5
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.2e-77 295.0 474 33.3
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 5.8e-77 292.7 298 52.0
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.9e-76 290.4 275 53.8
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 3.1e-70 270.4 472 32.0
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.9e-67 261.2 474 32.3
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 3.3e-56 223.8 326 33.4
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 3.1e-46 190.7 407 28.7
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 1.5e-45 188.3 108 75.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.8e-38 164.9 114 73.7
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 4.5e-37 160.2 133 60.2
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 3.2e-35 154.1 136 58.1
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 3.2e-35 154.1 136 58.1
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 1.6e-34 151.8 133 57.9
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.3e-23 115.5 221 35.7
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.3e-14 83.6 49 73.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 9.1e-14 82.8 53 66.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.5e-13 80.9 49 71.4
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.2e-11 74.3 48 68.8
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 6.1e-10 70.1 66 50.0
Potri.009G059500 Populus trichocarpa HOM05D003531 ORTHO05D004354 6.8e-09 66.6 88 47.7
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 8.8e-09 66.2 44 70.5
Sabra11G0102900 Salix brachista HOM05D006845 ORTHO05D348942 2.8e-07 61.2 37 75.7
Sabra16G0162700 Salix brachista HOM05D003531 ORTHO05D004354 3.7e-07 60.8 111 40.5
Potri.001G264800 Populus trichocarpa HOM05D003531 ORTHO05D004354 8.3e-07 59.7 110 40.9


User provided reference genes

Program Settings