Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 9.2e-93 343.6 178 100.0
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 4.4e-87 324.7 178 93.8
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 3.0e-43 179.1 181 56.9
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 1.1e-42 177.2 169 57.4
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 1.3e-41 173.7 193 53.4
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 5.8e-39 164.9 191 49.7
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.0e-38 164.1 176 55.7
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 6.5e-38 161.4 185 51.4
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 8.4e-38 161.0 176 54.5
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 7.1e-37 157.9 188 52.1
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 7.1e-37 157.9 193 48.7
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 2.3e-35 152.9 183 53.0
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.9e-35 152.1 177 53.1
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 5.1e-35 151.8 171 52.6
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.9e-34 149.8 184 48.4
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 3.3e-34 149.1 183 49.2
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 7.4e-34 147.9 196 49.0
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 1.6e-33 146.7 173 50.9
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 2.8e-33 146.0 175 50.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.1e-32 144.1 193 48.7
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 1.8e-32 143.3 180 47.2
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 3.1e-32 142.5 169 48.5
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 4.1e-32 142.1 182 46.7
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.3e-32 141.7 186 47.3
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 6.9e-32 141.4 181 46.4
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 9.0e-32 141.0 181 45.9
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 9.0e-32 141.0 181 47.0
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 4.5e-31 138.7 180 45.0
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 5.9e-31 138.3 181 48.1
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.0e-30 137.5 180 44.4
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.3e-30 137.1 183 45.9
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 1.7e-30 136.7 191 45.0
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.9e-30 136.0 173 49.1
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 3.8e-30 135.6 178 44.9
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 3.8e-30 135.6 179 46.4
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 6.5e-30 134.8 183 43.7
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 8.5e-30 134.4 184 46.7
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.4e-29 133.7 189 44.4
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.9e-29 133.3 188 44.7
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.9e-29 133.3 173 46.2
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 2.5e-29 132.9 188 44.1
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.5e-29 132.9 188 44.7
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.5e-29 132.9 171 48.5
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 3.2e-29 132.5 182 47.8
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 3.2e-29 132.5 172 43.6
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 4.2e-29 132.1 185 43.8
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 5.5e-29 131.7 171 47.4
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 5.5e-29 131.7 176 47.7
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 1.2e-28 130.6 185 46.5
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.6e-28 130.2 193 42.5
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.6e-28 130.2 180 45.6
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 1.6e-28 130.2 176 43.8
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 1.6e-28 130.2 176 43.8
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.6e-28 129.0 174 47.7
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 3.6e-28 129.0 193 41.5
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.6e-28 129.0 177 44.6
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 4.6e-28 128.6 183 45.4
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 6.1e-28 128.3 179 44.1
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 6.1e-28 128.3 171 47.4
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 6.1e-28 128.3 181 44.8
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 7.9e-28 127.9 179 44.7
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.3e-27 127.1 180 45.6
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.8e-27 126.7 179 44.7
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.8e-27 126.7 198 42.4
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.3e-27 126.3 181 44.8
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.3e-27 126.3 181 44.8
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 2.3e-27 126.3 169 46.7
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 3.0e-27 125.9 179 44.1
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 5.1e-27 125.2 187 40.1
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 5.1e-27 125.2 170 42.9
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 8.8e-27 124.4 185 42.2
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.1e-26 124.0 168 45.2
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.1e-26 124.0 195 40.5
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.5e-26 123.6 172 45.9
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.5e-26 123.6 175 45.7
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.9e-26 123.2 175 42.9
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.9e-26 123.2 181 42.0
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 3.3e-26 122.5 175 42.9
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 9.7e-26 120.9 160 47.5
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.7e-25 120.2 175 45.1
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.2e-25 119.8 175 45.1
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.8e-25 119.4 185 40.0
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 6.3e-25 118.2 177 42.4
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.1e-24 117.5 188 44.7
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.4e-24 117.1 180 41.1
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 1.4e-24 117.1 192 40.1
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.4e-24 116.3 179 41.3
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 3.1e-24 115.9 178 41.0
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.5e-23 113.6 181 40.3
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 2.6e-23 112.8 173 40.5
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 1.7e-22 110.2 180 42.2
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 6.5e-22 108.2 166 38.0
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.4e-21 107.1 170 44.7
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 1.9e-21 106.7 178 39.9
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 1.9e-21 106.7 187 37.4
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.5e-21 106.3 182 40.1
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 2.5e-21 106.3 173 35.8
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 4.2e-21 105.5 206 36.4
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 5.5e-21 105.1 174 41.4
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 5.5e-21 105.1 162 40.7
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 5.5e-21 105.1 168 38.7
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.1e-20 103.2 177 39.5
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.1e-20 103.2 133 45.9
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 2.7e-20 102.8 173 36.4
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 4.7e-20 102.1 117 45.3
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 1.0e-19 100.9 170 40.0
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.8e-19 100.1 176 38.6
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 3.0e-19 99.4 211 35.1
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 5.1e-19 98.6 168 41.7
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 6.7e-19 98.2 174 40.8
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 1.1e-18 97.4 184 37.0
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 2.6e-18 96.3 180 38.9
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 7.4e-18 94.7 177 35.0
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.3e-17 94.0 177 37.3
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 2.2e-17 93.2 173 35.8
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 3.7e-17 92.4 174 36.8
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.4e-16 89.7 121 43.8
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 3.1e-16 89.4 219 32.4
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.7e-14 83.6 120 44.2
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 4.2e-13 79.0 155 36.1
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 1.6e-12 77.0 71 53.5
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 3.9e-11 72.4 150 34.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 4.4e-10 68.9 50 64.0
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 9.7e-10 67.8 169 32.5
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 6.3e-09 65.1 62 54.8
SHI03806 Sapria himalayana HOM05D005478 ORTHO05D006426 8.2e-09 64.7 119 37.8
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 7.0e-08 61.6 53 52.8
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.2e-07 60.8 50 58.0
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 3.5e-07 59.3 53 50.9
Gorai.009G134600 Gossypium raimondii HOM05D005478 ORTHO05D006426 4.5e-07 58.9 55 58.2
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 5.9e-07 58.5 127 40.2
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 2.9e-06 56.2 145 31.0
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 5.0e-06 55.5 179 27.9


User provided reference genes

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