Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0218500 Salix brachista HOM05D003681 ORTHO05D004703 0.0e+00 1423.3 738 100.0
Potri.001G337700 Populus trichocarpa HOM05D003681 ORTHO05D004703 0.0e+00 1305.4 738 92.0
Potri.001G337600 Populus trichocarpa HOM05D003681 ORTHO05D004703 0.0e+00 1286.2 738 91.3
Sabra16G0218400 Salix brachista HOM05D003681 ORTHO05D004703 0.0e+00 1255.7 739 89.6
QL02p072923 Quercus lobata HOM05D003681 ORTHO05D004703 0.0e+00 1080.5 750 77.5
Manes.15G156300 Manihot esculenta HOM05D003681 ORTHO05D004703 0.0e+00 1076.6 738 78.0
Manes.17G107300 Manihot esculenta HOM05D003681 ORTHO05D004703 0.0e+00 1076.2 739 78.2
Ciclev10014307m.g Citrus clementina HOM05D003681 ORTHO05D004703 5.0e-312 1073.9 744 77.6
Atru.chr6.2486 Acer truncatum HOM05D003681 ORTHO05D004703 2.2e-310 1068.5 750 77.2
CiPaw.04G033000 Carya illinoinensis HOM05D003681 ORTHO05D004703 9.4e-309 1063.1 749 77.0
Cpa.g.sc130.41 Carica papaya HOM05D003681 ORTHO05D004703 3.6e-308 1061.2 749 76.1
TWI12G0555 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 1.8e-307 1058.9 749 76.6
GSVIVG01001851001 Vitis vinifera HOM05D003681 ORTHO05D004703 8.8e-307 1056.6 750 75.7
Thecc.04G027500 Theobroma cacao HOM05D003681 ORTHO05D004703 2.0e-306 1055.4 738 77.1
Dinv33384 Davidia involucrata HOM05D003681 ORTHO05D004703 1.7e-305 1052.4 749 76.0
Cfa007279 Carpinus fangiana HOM05D003681 ORTHO05D004703 3.7e-305 1051.2 737 77.1
TWI36G0744 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 1.4e-304 1049.3 749 75.4
Dinv25694 Davidia involucrata HOM05D003681 ORTHO05D004703 7.7e-303 1043.5 749 75.4
Actinidia18423 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.4e-299 1032.7 745 74.0
CiPaw.03G050400 Carya illinoinensis HOM05D003681 ORTHO05D004703 8.8e-299 1030.0 749 74.4
Prupe.3G299500 Prunus persica HOM05D003681 ORTHO05D004703 1.4e-296 1022.7 749 75.2
Haze_14813 Corylus avellana HOM05D003681 ORTHO05D004703 1.8e-296 1022.3 760 73.8
PGR142G3554 Punica granatum HOM05D003681 ORTHO05D004703 1.8e-296 1022.3 749 73.7
CANSAT64G2654 Cannabis sativa HOM05D003681 ORTHO05D004703 1.6e-295 1019.2 754 72.5
COL.COLO4_29274 Corchorus olitorius HOM05D003681 ORTHO05D004703 2.0e-295 1018.8 748 74.6
Duzib187G0106 Durio zibethinus HOM05D003681 ORTHO05D004703 2.0e-295 1018.8 738 74.7
MD09G1017400 Malus domestica HOM05D003681 ORTHO05D004703 1.0e-294 1016.5 739 75.8
MD17G1018200 Malus domestica HOM05D003681 ORTHO05D004703 1.7e-294 1015.8 738 75.9
Gohir.A11G065000 Gossypium hirsutum HOM05D003681 ORTHO05D004703 2.9e-294 1015.0 738 74.7
Gohir.D09G033600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 4.7e-292 1007.7 756 72.5
Gorai.006G038600 Gossypium raimondii HOM05D003681 ORTHO05D004703 4.7e-292 1007.7 756 72.5
CSS0025950 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 8.0e-292 1006.9 746 73.3
Actinidia16950 Actinidia chinensis HOM05D003681 ORTHO05D004703 2.6e-290 1001.9 745 72.3
Gohir.A09G033400 Gossypium hirsutum HOM05D003681 ORTHO05D004703 2.8e-289 998.4 756 71.8
TAR374G1530 Trochodendron aralioides HOM05D003681 ORTHO05D004703 2.4e-288 995.3 751 72.4
Gohir.D11G069300 Gossypium hirsutum HOM05D003681 ORTHO05D004703 7.0e-288 993.8 738 73.2
Lj2g0006828 Lotus japonicus HOM05D003681 ORTHO05D004703 1.6e-287 992.6 740 73.9
Eucgr.I01693 Eucalyptus grandis HOM05D003681 ORTHO05D004703 4.5e-287 991.1 748 71.8
Gorai.007G074100 Gossypium raimondii HOM05D003681 ORTHO05D004703 5.9e-287 990.7 738 73.3
Phvul.004G057300 Phaseolus vulgaris HOM05D003681 ORTHO05D004703 2.9e-286 988.4 743 73.2
TAR622G1195 Trochodendron aralioides HOM05D003681 ORTHO05D004703 3.8e-286 988.0 751 71.9
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 2.5e-285 985.3 797 69.3
VMungo0464G1197 Vigna mungo HOM05D003681 ORTHO05D004703 2.5e-285 985.3 738 73.4
Gohir.D10G085200 Gossypium hirsutum HOM05D003681 ORTHO05D004703 9.5e-285 983.4 738 72.6
CSS0035050 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.6e-284 982.6 745 71.9
Gorai.011G093100 Gossypium raimondii HOM05D003681 ORTHO05D004703 8.0e-284 980.3 738 72.6
RcHm_v2.0_Chr2g0174171 Rosa chinensis HOM05D003681 ORTHO05D004703 1.8e-283 979.2 749 73.3
Glyma.19G077600 Glycine max HOM05D003681 ORTHO05D004703 8.9e-283 976.9 740 73.1
Lj7A605G77 Lonicera japonica HOM05D003681 ORTHO05D004703 1.5e-282 976.1 736 73.8
Glyma.05G073400 Glycine max HOM05D003681 ORTHO05D004703 2.0e-282 975.7 740 72.8
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea HOM05D003681 ORTHO05D004703 1.3e-281 973.0 740 73.1
Cc07_g00400 Coffea canephora HOM05D003681 ORTHO05D004703 1.7e-281 972.6 738 71.4
CsaV3_3G027310 Cucumis sativus L. HOM05D003681 ORTHO05D004703 1.8e-280 969.1 739 72.7
Aa31LG9G900 Aethionema arabicum HOM05D003681 ORTHO05D004703 5.4e-280 967.6 751 70.4
FAN14G5093 Fragaria x ananassa HOM05D003681 ORTHO05D004703 5.4e-280 967.6 750 72.3
AL7G49000 Arabidopsis lyrata HOM05D003681 ORTHO05D004703 1.7e-278 962.6 748 70.3
AT5G40740 Arabidopsis thaliana HOM05D003681 ORTHO05D004703 5.0e-278 961.1 748 70.3
Carub.0007s3474 Capsella rubella HOM05D003681 ORTHO05D004703 5.0e-278 961.1 749 70.2
PGSC0003DMG400006971 Solanum tuberosum HOM05D003681 ORTHO05D004703 1.9e-277 959.1 740 69.3
Thhalv10027657m.g Eutrema salsugineum HOM05D003681 ORTHO05D004703 5.6e-277 957.6 750 70.7
FAN09G4630 Fragaria x ananassa HOM05D003681 ORTHO05D004703 7.3e-277 957.2 750 71.6
CARHR213770 Cardamine hirsuta HOM05D003681 ORTHO05D004703 4.7e-276 954.5 749 70.1
ClCG05G013220 Citrullus lanatus HOM05D003681 ORTHO05D004703 8.0e-276 953.7 739 71.7
Sed0015235 Sechium edule HOM05D003681 ORTHO05D004703 8.0e-276 953.7 738 71.4
Sp7g01150 Schrenkiella parvula HOM05D003681 ORTHO05D004703 1.4e-275 953.0 749 70.0
FvH4_6g52640 Fragaria vesca HOM05D003681 ORTHO05D004703 1.8e-275 952.6 750 71.6
Nn4g22444 Nelumbo nucifera HOM05D003681 ORTHO05D004703 4.0e-275 951.4 754 69.6
BraA04t17035Z Brassica rapa HOM05D003681 ORTHO05D004703 1.5e-274 949.5 752 70.1
FAN05G4404 Fragaria x ananassa HOM05D003681 ORTHO05D004703 3.4e-274 948.3 777 69.5
C04p47540 Brassica napus HOM05D003681 ORTHO05D004703 7.5e-274 947.2 752 69.9
Sed0021158 Sechium edule HOM05D003681 ORTHO05D004703 9.8e-274 946.8 742 70.5
Solyc02g067990.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 1.3e-273 946.4 740 68.8
Lalb_Chr02g0157941 Lupinus albus HOM05D003681 ORTHO05D004703 2.2e-273 945.7 738 69.9
Sopen02g017120 Solanum pennellii HOM05D003681 ORTHO05D004703 6.4e-273 944.1 740 68.5
A04p13760 Brassica napus HOM05D003681 ORTHO05D004703 1.1e-272 943.3 754 69.9
TAR371G0788 Trochodendron aralioides HOM05D003681 ORTHO05D004703 1.4e-272 943.0 752 69.4
BraA07t29742Z Brassica rapa HOM05D003681 ORTHO05D004703 2.4e-272 942.2 748 69.8
THA.LOC104805345 Tarenaya hassleriana HOM05D003681 ORTHO05D004703 2.0e-271 939.1 751 69.5
BolC4t26356H Brassica oleracea HOM05D003681 ORTHO05D004703 3.5e-271 938.3 752 69.1
BolC6t37131H Brassica oleracea HOM05D003681 ORTHO05D004703 6.0e-271 937.6 748 69.5
FAN02G4174 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.0e-270 936.8 750 70.8
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 3.9e-270 934.9 740 69.3
Sc03g0006880 Simmondsia chinensis HOM05D003681 ORTHO05D004703 5.0e-270 934.5 743 69.4
A07p20510 Brassica napus HOM05D003681 ORTHO05D004703 6.6e-270 934.1 748 69.5
PGSC0003DMG400020227 Solanum tuberosum HOM05D003681 ORTHO05D004703 8.6e-270 933.7 737 69.3
CAN.G1057.25 Capsicum annuum HOM05D003681 ORTHO05D004703 1.5e-269 932.9 740 68.4
CSS0007013 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.9e-269 932.6 708 71.8
Actinidia36165 Actinidia chinensis HOM05D003681 ORTHO05D004703 2.1e-268 929.1 743 69.3
Aqoxy3G01435 Aquilegia oxysepala HOM05D003681 ORTHO05D004703 2.8e-268 928.7 750 68.5
BcaB02g07929 Brassica carinata HOM05D003681 ORTHO05D004703 3.6e-268 928.3 748 69.0
BcaB06g27549 Brassica carinata HOM05D003681 ORTHO05D004703 8.1e-268 927.2 738 69.5
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 1.2e-266 923.3 728 68.5
BcaC08g44481 Brassica carinata HOM05D003681 ORTHO05D004703 1.5e-266 922.9 748 68.9
C06p19360 Brassica napus HOM05D003681 ORTHO05D004703 3.4e-266 921.8 748 68.7
Sopen02g038450 Solanum pennellii HOM05D003681 ORTHO05D004703 4.4e-266 921.4 737 69.2
Nitab4.5_0000040g0490 Nicotiana tabacum HOM05D003681 ORTHO05D004703 7.5e-266 920.6 743 67.7
vmacro05923 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 9.8e-266 920.2 736 69.6
Oeu050433.3 Olea europaea HOM05D003681 ORTHO05D004703 3.7e-265 918.3 734 69.1
Solyc02g093810.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 6.4e-265 917.5 737 68.7
MSTRG.3111 Avicennia marina HOM05D003681 ORTHO05D004703 2.4e-264 915.6 742 69.3
Psat1g082400 Pisum sativum HOM05D003681 ORTHO05D004703 3.2e-264 915.2 739 69.6
ECA238G4183 Erigeron canadensis HOM05D003681 ORTHO05D004703 1.0e-262 910.2 730 67.5
Rhsim10G0011100 Rhododendron simsii HOM05D003681 ORTHO05D004703 1.7e-262 909.4 756 67.9
Lalb_Chr21g0317601 Lupinus albus HOM05D003681 ORTHO05D004703 6.6e-262 907.5 738 68.2
vmacro18313 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 3.3e-261 905.2 744 66.9
Migut.H00059 Erythranthe guttata HOM05D003681 ORTHO05D004703 5.6e-261 904.4 741 67.3
Medtr6g022730 Medicago truncatula HOM05D003681 ORTHO05D004703 5.6e-261 904.4 740 69.5
Rhsim08G0046300 Rhododendron simsii HOM05D003681 ORTHO05D004703 8.9e-259 897.1 770 65.3
HanXRQChr07g0199161 Helianthus annuus HOM05D003681 ORTHO05D004703 1.2e-258 896.7 738 67.1
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 1.5e-258 896.3 731 67.0
Oeu058755.3 Olea europaea HOM05D003681 ORTHO05D004703 4.4e-258 894.8 766 65.4
MBI11_g11079_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 3.8e-257 891.7 756 65.2
PSO017G2495 Papaver somniferum HOM05D003681 ORTHO05D004703 9.2e-256 887.1 761 65.6
SalBow1G2960 Salvia bowleyana HOM05D003681 ORTHO05D004703 7.8e-255 884.0 726 66.9
SalBow1G7977 Salvia bowleyana HOM05D003681 ORTHO05D004703 7.8e-255 884.0 726 66.9
SGA_v2.0_scaffold18G08242 Striga asiatica HOM05D003681 ORTHO05D004703 3.0e-254 882.1 756 65.9
Hund06716 Selenicereus undatus HOM05D003681 ORTHO05D004703 3.9e-254 881.7 735 67.1
AUR62036017 Chenopodium quinoa HOM05D003681 ORTHO05D004703 6.6e-254 880.9 744 66.5
Ca_04403_v3 Cicer arietinum L. HOM05D003681 ORTHO05D004703 9.6e-253 877.1 738 67.8
Peaxi162Scf00080g01724 Petunia axillaris HOM05D003681 ORTHO05D004703 1.6e-252 876.3 728 65.9
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 2.4e-251 872.5 728 66.2
PSO478G5006 Papaver somniferum HOM05D003681 ORTHO05D004703 6.9e-251 870.9 752 65.3
EL10Ac4g08610 Beta vulgaris HOM05D003681 ORTHO05D004703 1.1e-248 863.6 732 65.4
Lj1g0019639 Lotus japonicus HOM05D003681 ORTHO05D004703 1.4e-248 863.2 743 66.2
Sc03g0007020 Simmondsia chinensis HOM05D003681 ORTHO05D004703 3.4e-242 842.0 743 64.5
AUR62035509 Chenopodium quinoa HOM05D003681 ORTHO05D004703 2.9e-241 839.0 731 65.3
SGA_v2.0_scaffold135G34941 Striga asiatica HOM05D003681 ORTHO05D004703 5.3e-235 818.1 775 62.2
Lsat_1_v5_gn_2_93641 Lactuca sativa HOM05D003681 ORTHO05D004703 9.3e-232 807.4 748 62.7
TPR.G36528 Trifolium pratense HOM05D003681 ORTHO05D004703 9.6e-229 797.3 797 60.1
Gohir.A10G160600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 4.2e-224 781.9 547 76.8
Os02g0329300 Oryza sativa ssp. japonica HOM05D003681 ORTHO05D004703 7.6e-218 761.1 742 60.9
HPP92_006269 Vanilla planifolia HOM05D003681 ORTHO05D004703 1.4e-208 730.3 739 58.2
ATR0824G011 Amborella trichopoda HOM05D003681 ORTHO05D004703 4.2e-208 728.8 747 57.8
CDE07G0234 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 4.2e-208 728.8 754 56.5
Zm00001eb235200 Zea mays HOM05D003681 ORTHO05D004703 3.0e-206 722.6 728 58.8
TAR374G1355 Trochodendron aralioides HOM05D003681 ORTHO05D004703 8.2e-188 661.4 441 78.7
CDE04G2610 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 8.5e-185 651.4 730 52.9
unitig_21.g20482 Utricularia gibba HOM05D003681 ORTHO05D004703 7.2e-184 648.3 758 51.3
unitig_744.g24365 Utricularia gibba HOM05D003681 ORTHO05D004703 3.8e-169 599.4 620 56.3
QL07p006188 Quercus lobata HOM05D003681 ORTHO05D004703 5.7e-165 585.5 390 80.0
DCAR_011289 Daucus carota HOM05D003681 ORTHO05D004703 6.6e-161 572.0 572 59.1
Mapoly0032s0042 Marchantia polymorpha HOM05D003681 ORTHO05D004703 4.3e-136 489.6 747 42.4
QL09p045970 Quercus lobata HOM05D003681 ORTHO05D004703 1.3e-132 478.0 321 79.1
SHI03860 Sapria himalayana HOM05D003681 ORTHO05D004703 4.3e-128 463.0 434 61.1
MELO3C014854.2 Cucumis melo HOM05D003681 ORTHO05D004703 2.6e-125 453.8 437 61.6
SMO367G0854 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.3e-121 441.4 631 45.3
Pp3c4_18170 Physcomitrium patens HOM05D003681 ORTHO05D004703 4.5e-117 426.4 760 39.6
Pp3c13_14720 Physcomitrium patens HOM05D003681 ORTHO05D004703 4.6e-114 416.4 758 39.6
Pp3c13_14730 Physcomitrium patens HOM05D003681 ORTHO05D004703 4.6e-114 416.4 758 39.6
Pp3c3_25790 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.5e-112 410.6 518 46.7
SEGI_13919 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 1.2e-93 348.6 399 50.6
SGA_v2.0_scaffold135G34947 Striga asiatica HOM05D003681 ORTHO05D004703 2.9e-92 344.0 259 72.6
RcHm_v2.0_Chr2g0109021 Rosa chinensis HOM05D002608 ORTHO05D004703 3.6e-90 337.0 300 63.7
Actinidia35791 Actinidia chinensis HOM05D003681 ORTHO05D004703 6.1e-90 336.3 298 64.8
CBR_g66670 Chara braunii HOM05D003681 ORTHO05D004703 1.3e-84 318.5 590 37.8
Nn3g16565 Nelumbo nucifera HOM05D003681 ORTHO05D004703 4.4e-80 303.5 202 79.7
MBI06_g35146_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 1.3e-79 302.0 357 52.9
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis HOM05D003681 ORTHO05D004703 6.3e-63 246.5 395 40.5
SMO367G0212 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 3.5e-61 240.7 619 34.4
RcHm_v2.0_Chr5g0047251 Rosa chinensis HOM05D002608 ORTHO05D021346 4.9e-55 220.3 465 37.8
TAR629G3339 Trochodendron aralioides HOM05D003681 ORTHO05D030546 1.5e-51 208.8 649 29.4
SMO367G0417 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 4.7e-50 203.8 622 33.1
Lsat_1_v5_gn_3_79520 Lactuca sativa HOM05D003681 ORTHO05D004703 7.8e-45 186.4 193 56.5
RcHm_v2.0_Chr6g0248701 Rosa chinensis HOM05D002608 ORTHO05D013040 6.4e-39 166.8 110 75.5
SMO275G0043 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 1.9e-35 155.2 131 64.9
DCAR_011288 Daucus carota HOM05D003681 ORTHO05D004703 3.3e-35 154.5 166 54.2
RcHm_v2.0_Chr5g0045391 Rosa chinensis HOM05D003681 ORTHO05D004703 8.1e-34 149.8 95 78.9
RcHm_v2.0_Chr2g0096321 Rosa chinensis HOM05D003681 ORTHO05D004703 3.1e-33 147.9 95 77.9
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 4.4e-32 144.1 226 42.5
RcHm_v2.0_Chr2g0166591 Rosa chinensis HOM05D003681 ORTHO05D004703 6.4e-31 140.2 76 96.1
SHI03859 Sapria himalayana HOM05D000105 ORTHO05D000023 6.4e-31 140.2 300 38.0
BcaC05g26953 Brassica carinata HOM05D003681 ORTHO05D024003 7.1e-22 110.2 57 93.0
C05p28020 Brassica napus HOM05D003681 ORTHO05D024003 7.1e-22 110.2 57 93.0
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 1.0e-20 106.3 262 32.1
BolC5t31529H Brassica oleracea HOM05D003681 ORTHO05D024003 1.1e-19 102.8 57 91.2
RcHm_v2.0_Chr6g0248711 Rosa chinensis HOM05D003681 ORTHO05D030546 1.5e-19 102.4 51 94.1
SEGI_23209 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 7.3e-19 100.1 287 34.5
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 8.1e-18 96.7 50 94.0
MBI02_g11376_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D024003 2.4e-17 95.1 61 75.4
ECA247G3396 Erigeron canadensis HOM05D003681 ORTHO05D004703 2.6e-16 91.7 69 66.7
SEGI_03694 Sequoiadendron giganteum HOM05D003681 ORTHO05D024003 7.1e-14 83.6 57 68.4
SMO275G0001 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 9.3e-14 83.2 84 58.3
SMO367G0834 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 2.3e-12 78.6 85 52.9
Hma1.2p1_0006F.1_g004670 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 3.9e-12 77.8 238 30.3


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