Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 1.7e-59 232.6 136 100.0
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.8e-24 116.3 136 55.9
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 1.2e-20 103.6 142 50.0
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.8e-19 99.8 136 48.5
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 6.7e-19 97.8 133 48.9
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.1e-18 97.1 133 48.9
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 2.5e-18 95.9 136 45.6
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 4.3e-18 95.1 134 46.3
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 5.7e-18 94.7 76 67.1
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.3e-17 93.6 136 43.4
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.3e-17 93.6 136 43.4
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 1.7e-17 93.2 136 47.8
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 3.1e-16 89.0 136 44.1
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 3.1e-16 89.0 55 81.8
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 3.1e-16 89.0 136 44.9
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 4.1e-16 88.6 134 43.3
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 5.3e-16 88.2 62 74.2
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 5.3e-16 88.2 136 41.9
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 5.3e-16 88.2 62 74.2
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 6.9e-16 87.8 136 42.6
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 9.1e-16 87.4 55 81.8
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.1e-16 87.4 55 81.8
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.1e-16 87.4 55 81.8
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 9.1e-16 87.4 55 81.8
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 9.1e-16 87.4 53 79.2
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 9.1e-16 87.4 132 43.9
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 1.2e-15 87.0 132 43.2
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 1.2e-15 87.0 62 72.6
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.5e-15 86.7 56 78.6
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 2.0e-15 86.3 55 81.8
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 2.0e-15 86.3 56 78.6
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 2.0e-15 86.3 55 80.0
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 2.6e-15 85.9 132 43.9
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 2.6e-15 85.9 136 42.6
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 3.4e-15 85.5 136 44.9
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 3.4e-15 85.5 56 78.6
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 3.4e-15 85.5 136 44.1
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 3.4e-15 85.5 136 44.1
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 3.4e-15 85.5 136 42.6
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 5.9e-15 84.7 136 41.9
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 7.7e-15 84.3 132 42.4
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 7.7e-15 84.3 62 69.4
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 1.0e-14 84.0 56 73.2
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 1.0e-14 84.0 56 73.2
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 1.0e-14 84.0 136 42.6
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 1.3e-14 83.6 55 74.5
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 1.3e-14 83.6 132 42.4
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 1.3e-14 83.6 132 42.4
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 1.3e-14 83.6 75 57.3
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.3e-14 83.6 136 41.9
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 1.7e-14 83.2 56 73.2
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 1.7e-14 83.2 56 73.2
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 1.7e-14 83.2 132 41.7
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 1.7e-14 83.2 56 73.2
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 1.7e-14 83.2 132 41.7
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 1.7e-14 83.2 132 41.7
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 2.2e-14 82.8 56 75.0
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 2.2e-14 82.8 51 80.4
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 2.2e-14 82.8 76 59.2
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.9e-14 82.4 62 71.0
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 2.9e-14 82.4 136 41.2
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 2.9e-14 82.4 75 60.0
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 3.8e-14 82.0 55 72.7
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 3.8e-14 82.0 132 40.9
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 3.8e-14 82.0 132 40.9
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 5.0e-14 81.6 69 62.3
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 5.0e-14 81.6 136 40.4
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 5.0e-14 81.6 136 41.9
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 5.0e-14 81.6 55 74.5
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 5.0e-14 81.6 55 74.5
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 6.5e-14 81.3 75 57.3
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 6.5e-14 81.3 55 74.5
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 6.5e-14 81.3 55 72.7
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 6.5e-14 81.3 56 75.0
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 6.5e-14 81.3 136 41.9
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 6.5e-14 81.3 136 41.9
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 6.5e-14 81.3 75 54.7
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 8.5e-14 80.9 132 40.9
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 8.5e-14 80.9 55 72.7
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 8.5e-14 80.9 57 73.7
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.5e-14 80.9 57 73.7
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.5e-14 80.9 57 73.7
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.5e-14 80.9 57 73.7
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 8.5e-14 80.9 136 40.4
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 8.5e-14 80.9 51 78.4
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 1.1e-13 80.5 55 72.7
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.1e-13 80.5 51 76.5
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.4e-13 80.1 57 70.2
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 1.4e-13 80.1 75 54.7
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.4e-13 80.1 75 54.7
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 1.4e-13 80.1 75 53.3
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 1.9e-13 79.7 75 56.0
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 2.5e-13 79.3 55 72.7
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 2.5e-13 79.3 57 64.9
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 2.5e-13 79.3 55 70.9
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 3.2e-13 79.0 55 70.9
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.2e-13 79.0 52 80.8
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.2e-13 79.0 52 80.8
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 3.2e-13 79.0 62 62.9
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 4.2e-13 78.6 50 78.0
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 4.2e-13 78.6 55 67.3
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 4.2e-13 78.6 49 81.6
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 5.5e-13 78.2 53 69.8
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 5.5e-13 78.2 136 39.0
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 7.2e-13 77.8 75 53.3
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 9.4e-13 77.4 75 50.7
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 9.4e-13 77.4 55 63.6
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 9.4e-13 77.4 136 39.0
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 9.4e-13 77.4 55 67.3
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 1.2e-12 77.0 55 70.9
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.6e-12 76.6 56 67.9
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 1.6e-12 76.6 55 70.9
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 1.6e-12 76.6 55 67.3
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 2.1e-12 76.3 55 69.1
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 2.1e-12 76.3 136 38.2
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 2.7e-12 75.9 136 37.5
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 2.7e-12 75.9 62 59.7
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 6.1e-12 74.7 137 39.4
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 7.9e-12 74.3 72 58.3
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 7.9e-12 74.3 57 64.9
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 2.3e-11 72.8 57 64.9
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 2.3e-11 72.8 61 57.4
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 5.1e-11 71.6 75 56.0
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 5.1e-11 71.6 50 66.0
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 3.3e-10 68.9 136 36.0
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 5.7e-10 68.2 136 35.3
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 7.4e-10 67.8 140 40.7
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 3.7e-09 65.5 51 64.7
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 6.3e-09 64.7 51 60.8
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 4.1e-08 62.0 51 54.9
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 4.5e-07 58.5 40 67.5
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 7.7e-07 57.8 36 83.3
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 1.7e-06 56.6 136 30.9


User provided reference genes

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