Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0200400 Salix brachista HOM05D002808 ORTHO05D044790 3.7e-138 495.0 265 100.0
Potri.001G317001 Populus trichocarpa HOM05D002808 ORTHO05D003135 3.8e-95 352.1 236 79.2
Cfa014940 Carpinus fangiana HOM05D002808 ORTHO05D003135 6.9e-20 102.1 210 36.7
Manes.03G146300 Manihot esculenta HOM05D002808 ORTHO05D003135 1.0e-18 98.2 245 35.1
Thecc.06G193100 Theobroma cacao HOM05D002808 ORTHO05D003135 7.2e-17 92.0 145 36.6
TAR627G0014 Trochodendron aralioides HOM05D002808 ORTHO05D003135 2.7e-16 90.1 132 39.4
Haze_11623 Corylus avellana HOM05D002808 ORTHO05D044790 3.6e-16 89.7 196 36.7
Gorai.011G025400 Gossypium raimondii HOM05D002808 ORTHO05D003135 3.6e-16 89.7 147 36.7
Duzib235G0556 Durio zibethinus HOM05D002808 ORTHO05D003135 6.1e-16 89.0 147 36.7
CiPaw.09G054500 Carya illinoinensis HOM05D002808 ORTHO05D003135 1.4e-15 87.8 146 37.0
PSO675G4664 Papaver somniferum HOM05D002808 ORTHO05D003135 1.5e-14 84.3 132 35.6
PSO541G4209 Papaver somniferum HOM05D002808 ORTHO05D003135 2.0e-14 84.0 132 35.6
Duzib192G0379 Durio zibethinus HOM05D002808 ORTHO05D003135 2.8e-13 80.1 147 35.4
MD05G1320900 Malus domestica HOM05D002808 ORTHO05D003135 2.8e-13 80.1 158 34.8
COL.COLO4_22781 Corchorus olitorius HOM05D002808 ORTHO05D003135 3.7e-13 79.7 142 32.4
Aqoxy1G02592 Aquilegia oxysepala HOM05D002808 ORTHO05D003135 1.4e-12 77.8 116 38.8
QL05p038939 Quercus lobata HOM05D002808 ORTHO05D003135 1.8e-12 77.4 106 40.6
MD05G1320400 Malus domestica HOM05D002808 ORTHO05D003135 3.1e-12 76.6 158 34.8
TAR626G1215 Trochodendron aralioides HOM05D002808 ORTHO05D003135 4.1e-12 76.3 116 38.8
Potri.011G047100 Populus trichocarpa HOM05D002808 ORTHO05D003135 5.3e-12 75.9 146 34.2
TAR626G1282 Trochodendron aralioides HOM05D002808 ORTHO05D003135 9.1e-12 75.1 116 37.9
Sabra11G0032700 Salix brachista HOM05D002808 ORTHO05D003135 2.0e-11 73.9 142 31.0
Sed0028146 Sechium edule HOM05D002808 ORTHO05D003135 2.0e-11 73.9 110 33.6
Potri.004G038400 Populus trichocarpa HOM05D002808 ORTHO05D003135 4.5e-11 72.8 196 31.1
Ca_18516_v3 Cicer arietinum L. HOM05D002808 ORTHO05D003135 1.0e-10 71.6 95 37.9
Cc02_g12840 Coffea canephora HOM05D002808 ORTHO05D003135 1.0e-10 71.6 148 32.4
Cc09_g10780 Coffea canephora HOM05D002808 ORTHO05D003135 1.0e-10 71.6 148 32.4
Dinv07522 Davidia involucrata HOM05D002808 ORTHO05D003135 1.0e-10 71.6 150 34.0
Rhsim04G0067100 Rhododendron simsii HOM05D002808 ORTHO05D003135 2.2e-10 70.5 128 36.7
Phvul.006G188600 Phaseolus vulgaris HOM05D002808 ORTHO05D003135 3.8e-10 69.7 94 34.0
Haze_06527 Corylus avellana HOM05D002808 ORTHO05D003135 5.0e-10 69.3 114 35.1
TWI38G0056 Tripterygium wilfordii HOM05D002808 ORTHO05D003135 5.0e-10 69.3 132 37.9
ClCG03G005720 Citrullus lanatus HOM05D002808 ORTHO05D003135 6.5e-10 68.9 106 35.8
VMungo0540G0036 Vigna mungo HOM05D002808 ORTHO05D003135 6.5e-10 68.9 130 28.5
Lj6g0001777 Lotus japonicus HOM05D002808 ORTHO05D003135 8.5e-10 68.6 122 31.1
MD05G1320700 Malus domestica HOM05D002808 ORTHO05D003135 8.5e-10 68.6 172 30.8
CiPaw.03G174400 Carya illinoinensis HOM05D002808 ORTHO05D003135 1.1e-09 68.2 123 35.0
Sabra04G0023500 Salix brachista HOM05D002808 ORTHO05D003135 1.1e-09 68.2 140 32.1
GSVIVG01030542001 Vitis vinifera HOM05D002808 ORTHO05D003135 1.1e-09 68.2 124 33.9
Glyma.13G183300 Glycine max HOM05D002808 ORTHO05D003135 1.9e-09 67.4 103 35.0
Cpa.g.sc530.4 Carica papaya HOM05D002808 ORTHO05D003135 2.5e-09 67.0 130 33.1
CsaV3_1G011990 Cucumis sativus L. HOM05D002808 ORTHO05D003135 4.2e-09 66.2 106 34.9
Medtr4g089110 Medicago truncatula HOM05D002808 ORTHO05D003135 4.2e-09 66.2 97 36.1
GSVIVG01007118001 Vitis vinifera HOM05D002808 ORTHO05D003135 4.2e-09 66.2 118 33.1
Ca_00303_v3 Cicer arietinum L. HOM05D002808 ORTHO05D003135 5.5e-09 65.9 153 27.5
Haze_13133 Corylus avellana HOM05D002808 ORTHO05D003135 5.5e-09 65.9 114 33.3
Glyma.13G242700 Glycine max HOM05D002808 ORTHO05D003135 5.5e-09 65.9 126 31.0
Lalb_Chr05g0218311 Lupinus albus HOM05D002808 ORTHO05D003135 1.6e-08 64.3 106 28.3
TPR.G12045 Trifolium pratense HOM05D002808 ORTHO05D003135 2.1e-08 63.9 122 32.8
Sc17g0006360 Simmondsia chinensis HOM05D002808 ORTHO05D003135 2.7e-08 63.5 98 35.7
Atru.chr10.1958 Acer truncatum HOM05D002808 ORTHO05D003135 6.1e-08 62.4 152 29.6
Oeu038236.1 Olea europaea HOM05D002808 ORTHO05D003135 6.1e-08 62.4 149 30.9
arahy.Tifrunner.gnm1.ann1.KT8XA7 Arachis hypogaea HOM05D002808 ORTHO05D003135 7.9e-08 62.0 117 30.8
PGR004G0378 Punica granatum HOM05D002808 ORTHO05D003135 1.0e-07 61.6 97 33.0
THA.LOC104809567 Tarenaya hassleriana HOM05D002808 ORTHO05D003135 1.0e-07 61.6 150 30.0
Glyma.07G193100 Glycine max HOM05D002808 ORTHO05D003135 1.8e-07 60.8 105 33.3
Gohir.A06G125900 Gossypium hirsutum HOM05D002808 ORTHO05D003135 1.8e-07 60.8 192 28.1
QL08p038142 Quercus lobata HOM05D002808 ORTHO05D003135 1.8e-07 60.8 115 33.0
Carub.0002s0411 Capsella rubella HOM05D002808 ORTHO05D003135 2.3e-07 60.5 119 31.9
Lj4g0010618 Lotus japonicus HOM05D002808 ORTHO05D003135 2.3e-07 60.5 125 29.6
Lalb_Chr09g0327531 Lupinus albus HOM05D002808 ORTHO05D003135 2.3e-07 60.5 101 28.7
Ciclev10017687m.g Citrus clementina HOM05D002808 ORTHO05D003135 3.0e-07 60.1 91 35.2
arahy.Tifrunner.gnm1.ann1.29L0YD Arachis hypogaea HOM05D002808 ORTHO05D003135 3.9e-07 59.7 117 29.9
MELO3C002575.2 Cucumis melo HOM05D002808 ORTHO05D003135 3.9e-07 59.7 116 31.9
Gohir.D06G129900 Gossypium hirsutum HOM05D002808 ORTHO05D003135 3.9e-07 59.7 193 30.6
Gorai.010G151600 Gossypium raimondii HOM05D002808 ORTHO05D003135 3.9e-07 59.7 193 30.6
Phvul.002G225500 Phaseolus vulgaris HOM05D002808 ORTHO05D003135 5.1e-07 59.3 129 30.2
Hund21253 Selenicereus undatus HOM05D002808 ORTHO05D003135 5.1e-07 59.3 110 30.9
VMungo0251G2678 Vigna mungo HOM05D002808 ORTHO05D003135 5.1e-07 59.3 137 29.9
Thhalv10023269m.g Eutrema salsugineum HOM05D002808 ORTHO05D003135 1.1e-06 58.2 133 33.8
Medtr2g013000 Medicago truncatula HOM05D002808 ORTHO05D003135 1.5e-06 57.8 104 28.8
BcaC04g22302 Brassica carinata HOM05D002808 ORTHO05D003135 3.3e-06 56.6 132 33.3
C09p20960 Brassica napus HOM05D002808 ORTHO05D003135 3.3e-06 56.6 132 33.3
BolC9t54993H Brassica oleracea HOM05D002808 ORTHO05D003135 3.3e-06 56.6 132 33.3
BraA09t37329Z Brassica rapa HOM05D002808 ORTHO05D003135 3.3e-06 56.6 130 30.8
Nn1g06645 Nelumbo nucifera HOM05D002808 ORTHO05D003135 4.4e-06 56.2 135 26.7
Manes.13G148600 Manihot esculenta HOM05D002808 ORTHO05D003135 5.7e-06 55.8 116 29.3
TPR.G36820 Trifolium pratense HOM05D002808 ORTHO05D003135 5.7e-06 55.8 166 27.1
AL2G15350 Arabidopsis lyrata HOM05D002808 ORTHO05D003135 7.4e-06 55.5 120 32.5
AT1G61080 Arabidopsis thaliana HOM05D002808 ORTHO05D003135 7.4e-06 55.5 140 30.7
BcaB04g20313 Brassica carinata HOM05D002808 ORTHO05D003135 7.4e-06 55.5 130 28.5
Psat7g111840 Pisum sativum HOM05D002808 ORTHO05D003135 7.4e-06 55.5 96 30.2


User provided reference genes

Program Settings