Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 6.2e-71 270.8 146 100.0
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 5.6e-64 247.7 146 91.8
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.3e-57 226.5 146 84.9
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.9e-48 196.1 142 71.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 7.6e-45 184.1 144 68.8
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 7.6e-45 184.1 144 68.1
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 4.9e-44 181.4 144 68.8
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 5.5e-43 177.9 144 69.4
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.3e-41 173.3 149 67.1
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 6.7e-41 171.0 142 68.3
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 7.4e-40 167.5 144 63.2
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 7.4e-40 167.5 144 63.9
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 9.7e-40 167.2 141 65.2
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.6e-39 166.4 142 62.0
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 2.2e-39 166.0 148 67.6
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 8.2e-39 164.1 146 67.1
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 8.2e-39 164.1 144 66.7
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.1e-38 163.7 144 63.9
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 1.4e-38 163.3 144 66.0
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.8e-38 162.9 146 65.1
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.4e-38 162.5 144 63.9
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 5.3e-38 161.4 142 62.7
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 6.9e-38 161.0 144 63.9
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 6.9e-38 161.0 144 63.9
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 1.2e-37 160.2 145 64.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 2.0e-37 159.5 146 63.7
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 3.4e-37 158.7 144 61.8
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 7.7e-37 157.5 143 62.2
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.7e-36 156.4 144 59.0
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.7e-36 156.4 145 59.3
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 5.0e-36 154.8 144 61.8
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 6.5e-36 154.5 149 62.4
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 8.5e-36 154.1 145 58.6
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 1.4e-35 153.3 144 61.1
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 2.5e-35 152.5 145 62.8
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 2.5e-35 152.5 135 64.4
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 3.2e-35 152.1 144 59.7
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.2e-35 151.0 148 62.2
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 9.4e-35 150.6 130 62.3
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.2e-34 150.2 146 58.9
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 1.2e-34 150.2 144 59.0
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 2.1e-34 149.4 111 68.5
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.7e-34 149.1 142 59.9
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 4.6e-34 148.3 104 73.1
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.1e-34 147.9 146 60.3
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 7.9e-34 147.5 145 59.3
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.4e-33 146.7 148 60.1
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.4e-33 146.7 144 60.4
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 2.3e-33 146.0 144 59.0
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 3.0e-33 145.6 148 60.8
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.9e-33 145.2 131 61.8
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 3.9e-33 145.2 145 60.0
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 5.1e-33 144.8 145 61.4
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 5.1e-33 144.8 144 56.2
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.1e-32 143.7 131 61.1
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.1e-32 143.7 144 59.7
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.5e-32 143.3 145 58.6
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 2.5e-32 142.5 144 56.2
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 2.5e-32 142.5 144 58.3
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 4.3e-32 141.7 102 74.5
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 7.4e-32 141.0 130 62.3
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 9.7e-32 140.6 145 59.3
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.7e-31 139.8 149 57.0
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.8e-31 139.0 145 59.3
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 3.7e-31 138.7 133 61.7
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 4.8e-31 138.3 138 55.1
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.8e-31 138.3 142 54.9
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 6.3e-31 137.9 131 61.1
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 8.2e-31 137.5 147 56.5
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.4e-30 136.7 147 52.4
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.8e-30 136.3 119 63.9
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 2.4e-30 136.0 143 54.5
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.0e-29 132.9 146 55.5
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 3.4e-29 132.1 147 53.7
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 3.4e-29 132.1 145 58.6
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 5.9e-29 131.3 139 53.2
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 7.7e-29 131.0 145 57.9
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.7e-28 129.8 164 49.4
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.2e-28 129.4 154 53.2
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.2e-28 129.4 154 53.2
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 2.2e-28 129.4 88 75.0
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 2.9e-28 129.0 94 68.1
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 5.0e-28 128.3 146 52.7
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 5.0e-28 128.3 94 68.1
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 8.5e-28 127.5 130 54.6
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.1e-27 127.1 148 53.4
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.4e-27 126.7 149 54.4
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 2.5e-27 125.9 155 52.3
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 2.5e-27 125.9 155 52.3
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.5e-27 125.9 148 52.0
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 5.5e-27 124.8 148 52.0
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 5.5e-27 124.8 152 50.7
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 1.2e-26 123.6 116 60.3
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 2.7e-26 122.5 122 54.1
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 6.1e-26 121.3 148 52.7
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 3.0e-25 119.0 150 50.7
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 3.0e-25 119.0 79 73.4
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.1e-24 117.1 92 60.9
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.1e-24 117.1 127 52.8
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 7.4e-24 114.4 112 55.4
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.4e-22 109.4 115 50.4
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 5.9e-21 104.8 112 48.2
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.0e-20 104.0 110 57.3
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.3e-20 103.6 85 64.7
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.5e-20 101.3 82 61.0
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 6.5e-20 101.3 85 56.5
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.2e-19 99.0 106 50.0
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 1.1e-14 84.0 85 50.6
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 3.1e-14 82.4 86 48.8
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 1.6e-13 80.1 86 48.8
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 2.9e-12 75.9 87 41.4
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 8.5e-12 74.3 81 48.1
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.5e-11 73.6 52 71.2
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.5e-11 72.8 98 41.8
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.2e-10 70.5 102 46.1


User provided reference genes

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