Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.2e-96 355.9 218 100.0
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.2e-49 200.7 167 68.3
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 2.9e-48 196.1 215 67.0
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 7.6e-41 171.4 168 61.9
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 1.1e-39 167.5 205 62.4
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 4.2e-39 165.6 167 57.5
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 9.3e-39 164.5 216 57.4
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.7e-38 162.9 210 58.1
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 7.9e-38 161.4 170 57.6
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.0e-37 161.0 170 58.8
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.3e-37 160.6 168 59.5
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 5.1e-37 158.7 173 54.3
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 3.3e-36 156.0 167 56.9
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 4.3e-36 155.6 167 55.1
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 5.7e-36 155.2 169 56.8
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 7.4e-36 154.8 215 54.4
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 7.4e-36 154.8 177 56.5
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.3e-35 154.1 215 54.4
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 1.3e-35 154.1 167 55.1
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.3e-35 154.1 215 53.0
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 1.6e-35 153.7 167 55.1
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 2.2e-35 153.3 173 54.9
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 2.2e-35 153.3 222 53.2
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 6.3e-35 151.8 167 56.3
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 1.1e-34 151.0 160 57.5
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.1e-34 151.0 167 54.5
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.8e-34 150.2 167 53.9
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 2.4e-34 149.8 167 54.5
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 6.9e-34 148.3 167 53.9
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 9.1e-34 147.9 157 58.6
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.2e-33 147.5 211 56.4
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 1.2e-33 147.5 167 55.7
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.5e-33 147.1 167 55.1
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.5e-33 147.1 167 56.3
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.5e-33 147.1 167 56.3
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.5e-33 147.1 167 56.3
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.4e-33 146.0 167 53.9
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 5.9e-33 145.2 169 55.6
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.0e-32 144.4 167 55.7
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.3e-32 144.1 165 53.9
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 2.2e-32 143.3 169 53.3
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 2.2e-32 143.3 174 53.4
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 2.9e-32 142.9 168 56.0
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 6.5e-32 141.7 168 55.4
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 6.5e-32 141.7 167 52.7
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 6.5e-32 141.7 158 55.1
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 6.5e-32 141.7 157 56.1
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 6.5e-32 141.7 157 56.1
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.4e-31 140.6 158 54.4
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.9e-31 140.2 160 54.4
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 2.5e-31 139.8 167 55.1
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.2e-31 139.4 161 54.0
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 4.2e-31 139.0 157 55.4
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 9.4e-31 137.9 168 53.0
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.2e-30 137.5 161 53.4
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.6e-30 137.1 206 52.4
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.6e-30 137.1 158 54.4
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.7e-30 136.3 167 51.5
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.7e-30 136.3 159 53.5
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 3.6e-30 136.0 158 52.5
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 6.1e-30 135.2 167 50.9
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 6.1e-30 135.2 167 50.9
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 6.1e-30 135.2 167 50.9
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 7.9e-30 134.8 167 48.5
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.0e-29 134.4 167 52.1
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 1.4e-29 134.0 171 51.5
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.8e-29 133.7 222 45.0
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.8e-29 133.7 158 52.5
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 3.0e-29 132.9 167 49.7
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 3.0e-29 132.9 210 52.4
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 3.0e-29 132.9 159 51.6
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.1e-29 132.1 161 51.6
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 8.8e-29 131.3 211 48.8
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 1.1e-28 131.0 215 48.4
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.1e-28 131.0 157 54.1
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.0e-28 130.2 161 50.9
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 3.3e-28 129.4 159 49.1
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 3.3e-28 129.4 164 49.4
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 3.3e-28 129.4 206 50.0
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 7.4e-28 128.3 164 48.8
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 7.4e-28 128.3 205 53.7
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 1.3e-27 127.5 167 48.5
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 1.7e-27 127.1 253 41.5
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.7e-27 127.1 209 51.2
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 4.8e-27 125.6 174 48.3
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 4.8e-27 125.6 167 47.9
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 4.8e-27 125.6 168 48.8
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 4.8e-27 125.6 168 48.8
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 4.8e-27 125.6 168 48.8
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 6.3e-27 125.2 168 48.8
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 6.3e-27 125.2 159 50.9
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 8.2e-27 124.8 165 47.9
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 8.2e-27 124.8 153 51.0
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 1.1e-26 124.4 166 47.6
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 1.1e-26 124.4 170 48.2
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 1.4e-26 124.0 161 49.7
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 3.1e-26 122.9 198 51.0
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 5.3e-26 122.1 167 46.7
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.2e-25 120.9 167 46.7
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 3.4e-25 119.4 158 50.6
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 7.7e-25 118.2 121 59.5
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.7e-24 117.1 168 44.6
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.7e-24 117.1 168 44.6
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 8.5e-24 114.8 122 56.6
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.4e-23 114.0 120 57.5
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 3.2e-23 112.8 157 48.4
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 9.4e-23 111.3 156 48.7
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 3.6e-22 109.4 167 47.9
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 6.1e-22 108.6 144 50.0
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.0e-21 107.8 170 54.7
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 3.0e-21 106.3 156 47.4
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.9e-21 105.9 172 45.9
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 7.4e-20 101.7 141 47.5
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 1.7e-19 100.5 160 43.8
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 2.2e-19 100.1 226 41.2
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 2.2e-19 100.1 146 45.9
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.2e-19 100.1 170 45.3
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.8e-19 99.0 86 62.8
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 8.2e-19 98.2 90 60.0
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 3.5e-17 92.8 79 67.1
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.8e-16 89.4 153 41.2
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 5.0e-16 89.0 155 41.9
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 3.2e-15 86.3 160 40.6
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 3.6e-14 82.8 89 58.4
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.0e-13 81.3 86 76.7
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 1.3e-11 74.3 115 44.3
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 5.3e-10 68.9 59 62.7
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 7.0e-10 68.6 95 62.1
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 2.1e-06 57.0 37 75.7
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 4.7e-06 55.8 80 48.8


User provided reference genes

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