Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 1.6e-253 879.0 465 100.0
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.0e-220 768.5 448 91.5
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 5.7e-195 684.5 449 82.0
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 2.3e-183 646.0 476 75.0
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 7.3e-158 561.2 451 67.0
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 4.7e-157 558.5 451 67.2
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 4.4e-155 552.0 451 66.5
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 9.9e-155 550.8 454 67.2
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.1e-150 537.3 450 65.3
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 1.1e-150 537.3 453 64.9
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.4e-148 529.6 454 64.3
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.4e-148 529.6 454 64.3
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.5e-147 526.9 465 64.3
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 1.5e-147 526.9 450 64.0
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 9.9e-147 524.2 450 64.7
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 8.4e-146 521.2 450 63.3
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 7.1e-145 518.1 446 65.7
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 1.3e-143 513.8 453 62.3
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.3e-143 513.1 447 63.5
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 3.9e-143 512.3 439 65.4
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 7.3e-142 508.1 441 64.2
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 9.6e-142 507.7 450 62.7
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.6e-141 506.9 439 64.9
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.1e-141 506.5 476 60.5
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 3.6e-141 505.8 476 60.5
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 1.1e-140 504.2 464 61.6
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 1.4e-140 503.8 482 59.8
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.5e-139 500.4 450 61.1
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 2.0e-139 500.0 450 61.1
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 3.4e-139 499.2 447 62.9
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 9.9e-139 497.7 454 61.7
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.3e-138 497.3 447 63.1
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 3.8e-138 495.7 452 61.9
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.9e-138 495.4 502 56.6
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.1e-137 494.2 509 56.0
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 3.2e-137 492.7 464 59.7
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 5.5e-137 491.9 452 61.5
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 7.1e-137 491.5 441 63.7
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.2e-136 490.7 429 62.5
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 2.1e-136 490.0 439 62.9
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 3.3e-134 482.6 428 62.9
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 3.3e-134 482.6 454 61.0
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 5.6e-134 481.9 447 60.6
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.1e-133 479.9 458 60.3
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 5.3e-132 475.3 458 59.6
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 6.9e-132 474.9 416 63.2
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 1.2e-131 474.2 452 59.3
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 3.8e-130 469.2 449 58.6
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 3.8e-130 469.2 435 61.6
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 6.5e-130 468.4 422 61.1
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 3.0e-127 459.5 452 57.7
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 3.9e-127 459.1 451 57.9
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.9e-126 456.8 444 58.3
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 1.6e-125 453.8 459 56.9
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 6.3e-125 451.8 454 57.0
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 8.2e-125 451.4 450 57.1
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.4e-124 450.7 453 57.6
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 3.1e-124 449.5 449 56.3
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 5.3e-124 448.7 454 56.8
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 9.0e-124 448.0 448 56.2
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 2.0e-123 446.8 455 56.5
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 6.5e-122 441.8 449 55.7
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 2.5e-121 439.9 452 57.1
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 3.2e-121 439.5 448 56.2
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 7.2e-121 438.3 486 52.7
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 7.2e-121 438.3 466 56.7
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.6e-120 435.6 400 62.8
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 7.9e-120 434.9 458 54.1
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 5.1e-119 432.2 569 47.8
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.1e-118 431.0 480 54.2
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 5.7e-118 428.7 447 54.6
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 5.7e-118 428.7 397 61.2
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 9.7e-118 427.9 450 54.9
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.4e-116 424.1 434 58.1
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.7e-114 417.2 483 52.0
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.4e-113 414.1 478 52.1
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 3.2e-113 412.9 479 52.0
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 6.1e-112 408.7 478 51.7
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.5e-110 404.1 478 51.0
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.5e-110 404.1 479 50.9
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 5.7e-110 402.1 454 51.5
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.1e-108 397.9 455 53.2
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 9.4e-105 384.8 458 49.3
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 4.8e-101 372.5 458 48.0
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 1.4e-100 370.9 447 49.4
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.8e-100 370.5 428 51.2
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 8.5e-90 335.1 474 43.9
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.1e-89 334.7 446 48.4
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.1e-89 334.7 455 44.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.8e-85 320.1 475 42.5
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.7e-82 310.8 481 41.6
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.6e-80 304.3 448 42.4
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.8e-79 300.8 471 40.8
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.7e-75 287.0 215 71.2
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 2.3e-74 283.9 333 51.7
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 6.8e-71 272.3 449 40.5
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.7e-69 267.7 462 39.0
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 3.7e-69 266.5 312 50.0
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 3.0e-66 256.9 280 55.7
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 1.6e-64 251.1 371 41.0
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 3.4e-62 243.4 302 47.7
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 2.3e-58 230.7 165 75.2
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 3.6e-56 223.4 258 51.6
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 8.3e-53 212.2 219 56.2
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 9.2e-52 208.8 215 54.4
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.7e-51 207.2 610 30.8
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.8e-48 197.2 150 70.0
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 6.8e-47 192.6 152 67.1
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.4e-39 167.5 218 43.6
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 1.4e-36 158.3 584 27.2
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 3.5e-35 153.7 480 29.6
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 3.6e-24 117.1 101 61.4
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.4e-23 115.2 158 50.6
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 4.0e-23 113.6 137 56.2
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.3e-21 108.6 78 70.5
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 4.9e-21 106.7 173 42.2
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 4.9e-21 106.7 72 84.7
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 9.6e-17 92.4 91 61.5
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.1e-16 91.3 91 60.4
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 8.1e-16 89.4 90 63.3
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 9.3e-12 75.9 52 69.2
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 2.8e-08 64.3 93 40.9
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 8.2e-08 62.8 47 74.5
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 3.1e-07 60.8 51 62.7


User provided reference genes

Program Settings