Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 2.4e-193 678.7 352 100.0
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.5e-155 550.8 352 84.1
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.6e-133 479.9 352 73.3
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 8.5e-50 201.8 346 40.8
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.8e-39 167.5 386 36.8
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.2e-30 138.3 363 35.5
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.4e-30 136.7 375 34.4
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.4e-30 136.7 381 32.0
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 1.3e-29 134.8 377 30.2
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.3e-29 134.8 383 32.6
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 9.2e-28 128.6 359 31.8
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 4.6e-27 126.3 366 33.6
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 5.9e-27 125.9 368 28.0
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 3.3e-25 120.2 359 31.5
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 4.3e-25 119.8 382 30.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 6.2e-24 115.9 367 29.7
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 6.2e-24 115.9 362 30.7
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 6.8e-23 112.5 375 30.1
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.2e-22 111.7 360 28.1
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.2e-22 111.7 372 29.0
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 4.4e-22 109.8 361 31.3
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.2e-21 107.5 364 28.8
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.7e-21 106.7 377 31.3
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.7e-21 106.7 366 27.6
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.2e-19 101.7 366 29.5
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.2e-19 101.7 360 28.1
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.0e-19 100.9 306 30.4
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 4.6e-19 99.8 365 30.7
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 4.6e-19 99.8 365 30.7
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 7.8e-19 99.0 399 30.1
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.0e-18 98.6 345 31.3
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.3e-18 98.2 344 29.7
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 8.6e-18 95.5 365 26.8
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.1e-17 95.1 398 29.4
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.5e-17 94.7 227 36.6
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.5e-17 94.7 369 27.9
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.5e-17 94.0 345 30.4
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 3.3e-17 93.6 361 25.5
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 3.3e-17 93.6 352 28.7
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 3.3e-17 93.6 371 28.8
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 5.6e-17 92.8 386 28.8
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 7.3e-17 92.4 373 31.6
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.2e-16 91.7 406 29.1
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 6.2e-16 89.4 355 27.6
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.1e-15 88.6 143 39.2
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 1.8e-15 87.8 380 23.9
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.8e-15 87.8 372 29.0
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.3e-15 87.4 370 27.0
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 3.1e-15 87.0 390 26.9
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 6.8e-15 85.9 382 29.1
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.2e-14 85.1 362 26.0
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.5e-14 84.7 355 27.9
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.6e-14 84.0 358 26.5
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.5e-14 82.4 369 27.1
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 7.5e-14 82.4 368 26.4
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 7.5e-14 82.4 377 26.5
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 9.8e-14 82.0 326 28.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.3e-13 81.6 355 26.5
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 1.3e-13 81.6 360 25.8
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.3e-13 81.6 363 24.8
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 2.9e-13 80.5 388 26.8
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.9e-13 80.5 360 26.4
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.4e-12 78.2 362 25.4
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 1.4e-12 78.2 214 33.2
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.4e-12 78.2 377 24.9
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 2.4e-12 77.4 365 26.8
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.4e-12 77.4 367 27.2
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.2e-12 77.0 348 24.4
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.1e-12 76.6 375 26.1
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 5.4e-12 76.3 381 26.5
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 7.1e-12 75.9 360 26.1
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 4.6e-11 73.2 355 25.6
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 6.0e-11 72.8 191 29.3
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.0e-11 72.8 363 25.1
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 7.8e-11 72.4 351 25.1
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.3e-10 71.6 351 25.1
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.7e-10 71.2 383 26.1
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 3.0e-10 70.5 380 24.5
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 5.1e-10 69.7 135 34.8
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.1e-10 69.7 351 24.8
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 1.9e-09 67.8 348 26.7
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 1.9e-09 67.8 345 27.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.5e-09 67.4 371 24.5
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.5e-09 67.4 145 34.5
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 4.3e-09 66.6 123 29.3
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 9.5e-09 65.5 345 25.5
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 1.2e-08 65.1 357 27.2
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.2e-08 65.1 345 25.5
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.6e-08 64.7 347 25.1
VMungo1215G3202 Vigna mungo HOM05D023496 ORTHO05D025628 2.8e-08 63.9 372 25.8
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.1e-07 62.0 363 26.7
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.4e-07 61.6 201 28.9
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.8e-07 61.2 376 22.9
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 8.9e-07 58.9 375 25.6
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 8.9e-07 58.9 207 27.5
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.6e-06 57.4 354 24.6
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 7.6e-06 55.8 359 24.8
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 7.6e-06 55.8 354 25.7
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 9.9e-06 55.5 377 23.3


User provided reference genes

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