Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 7.2e-166 587.0 269 100.0
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 3.0e-135 485.3 269 83.6
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 1.8e-108 396.4 260 69.2
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 2.0e-99 366.3 264 64.0
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.7e-98 363.2 270 64.4
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 1.9e-97 359.8 269 63.2
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 3.2e-97 359.0 269 63.2
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.6e-96 356.7 270 60.4
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 3.5e-96 355.5 268 61.6
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.0e-95 354.0 268 61.2
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 3.9e-95 352.1 266 61.3
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 8.7e-95 350.9 261 61.7
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 3.3e-94 349.0 245 64.9
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.1e-93 346.3 271 60.9
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 2.1e-93 346.3 271 60.9
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 1.1e-92 344.0 268 60.4
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.4e-92 343.6 250 62.8
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 1.8e-92 343.2 263 62.7
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 3.1e-92 342.4 269 61.7
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 4.0e-92 342.0 264 60.6
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 6.9e-92 341.3 269 59.1
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 9.0e-92 340.9 269 59.1
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.3e-90 337.0 263 58.6
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.1e-89 334.0 257 59.1
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 9.3e-89 330.9 269 57.2
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 2.1e-88 329.7 232 64.7
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.7e-88 329.3 267 57.7
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 2.7e-88 329.3 270 55.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 3.5e-88 328.9 269 57.2
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.6e-88 328.6 269 57.2
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.0e-87 327.4 259 57.1
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 2.3e-87 326.2 242 62.4
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 3.0e-87 325.9 281 55.9
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 5.1e-87 325.1 274 56.6
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.5e-86 323.6 269 56.9
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 5.6e-86 321.6 252 61.9
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 9.6e-86 320.9 264 56.8
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 1.3e-85 320.5 273 58.6
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 2.8e-85 319.3 264 56.4
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 3.7e-85 318.9 287 56.8
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 4.8e-85 318.5 274 57.3
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 4.8e-85 318.5 232 62.9
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.1e-84 317.4 269 55.4
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 2.4e-84 316.2 268 58.6
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 2.4e-84 316.2 265 56.6
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 1.2e-83 313.9 223 65.9
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 4.5e-83 312.0 256 55.5
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 4.5e-83 312.0 228 61.4
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 5.8e-83 311.6 296 52.4
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 5.8e-83 311.6 246 58.5
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.0e-82 310.8 274 55.5
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 2.2e-82 309.7 272 55.1
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 2.2e-82 309.7 264 55.7
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 2.9e-82 309.3 250 56.8
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 4.9e-82 308.5 264 55.3
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 1.1e-81 307.4 269 54.6
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.1e-81 307.4 268 54.1
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.9e-81 306.6 272 54.8
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.5e-81 306.2 217 61.8
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 7.1e-81 304.7 270 51.9
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.2e-80 303.9 257 56.4
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 1.6e-80 303.5 258 54.7
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.7e-80 302.8 218 64.2
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 7.9e-80 301.2 291 52.9
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 3.9e-79 298.9 221 60.2
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.9e-79 298.9 268 54.1
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 6.7e-79 298.1 258 54.7
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.1e-78 297.4 223 60.5
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 1.1e-78 297.4 271 53.5
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 2.1e-77 293.1 264 54.5
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 2.1e-77 293.1 271 55.0
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 4.8e-77 292.0 206 62.1
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 8.2e-77 291.2 258 53.5
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.1e-76 290.8 229 59.4
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 1.8e-76 290.0 264 54.5
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 2.4e-76 289.7 277 54.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 5.3e-76 288.5 225 60.4
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 9.0e-76 287.7 270 54.1
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 9.0e-76 287.7 261 54.4
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.2e-75 287.3 283 51.9
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 1.5e-75 287.0 264 54.2
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 4.5e-75 285.4 266 54.1
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 4.5e-75 285.4 264 53.8
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.3e-74 283.9 226 59.7
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.7e-74 283.5 208 62.0
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.9e-74 282.7 254 52.0
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 3.8e-74 282.3 254 54.3
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 8.5e-74 281.2 255 54.9
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 4.2e-73 278.9 269 54.6
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 7.2e-73 278.1 252 53.6
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 7.2e-73 278.1 252 53.6
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 7.2e-73 278.1 195 62.6
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.1e-70 270.8 231 53.7
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.3e-69 267.3 195 64.6
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.8e-69 265.4 195 64.1
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.8e-69 265.4 195 64.1
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.1e-68 264.2 195 63.6
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.2e-67 260.8 233 53.6
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 5.9e-67 258.5 196 60.2
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 1.3e-66 257.3 252 52.0
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 6.5e-66 255.0 205 59.5
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 6.5e-66 255.0 205 59.5
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 2.1e-64 250.0 226 56.6
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 4.6e-64 248.8 214 57.9
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 6.7e-63 245.0 252 51.2
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 8.8e-63 244.6 163 64.4
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 9.7e-62 241.1 239 49.8
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 3.7e-61 239.2 252 50.4
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 5.3e-60 235.3 215 54.9
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 7.2e-57 224.9 208 51.0
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.8e-55 220.3 146 66.4
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.0e-47 194.5 150 54.7
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.7e-45 187.2 252 42.9
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.0e-35 153.7 145 50.3
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 8.6e-34 148.3 84 67.9
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 8.0e-32 141.7 154 45.5
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.4e-31 141.0 149 47.7
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 5.7e-30 135.6 144 44.4
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.8e-29 133.3 104 57.7
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.0e-19 100.5 198 36.9
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 4.7e-08 62.8 83 43.4


User provided reference genes

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