Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 3.2e-61 238.4 137 100.0
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 3.1e-48 195.3 137 73.7
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 5.0e-46 188.0 137 72.3
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 5.1e-35 151.4 138 58.7
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 3.8e-30 135.2 129 54.3
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 5.0e-30 134.8 137 53.3
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 2.7e-28 129.0 137 53.3
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 2.3e-27 125.9 129 52.7
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 5.2e-27 124.8 137 48.2
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 8.8e-27 124.0 133 51.1
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 2.0e-26 122.9 132 53.8
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 2.0e-26 122.9 132 53.8
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 3.3e-26 122.1 134 52.2
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 3.3e-26 122.1 133 51.1
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 4.4e-26 121.7 129 52.7
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 4.4e-26 121.7 131 49.6
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 5.7e-26 121.3 131 51.1
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 6.3e-25 117.9 129 51.9
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 2.4e-24 115.9 133 50.4
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 2.4e-24 115.9 133 50.4
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 5.3e-24 114.8 131 48.1
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 5.3e-24 114.8 131 48.1
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 7.0e-24 114.4 131 47.3
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 9.1e-24 114.0 134 47.0
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 1.2e-23 113.6 129 50.4
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 2.6e-23 112.5 129 47.3
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 3.5e-23 112.1 129 47.3
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 4.5e-23 111.7 129 49.6
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 7.7e-23 110.9 133 45.1
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 2.2e-22 109.4 131 45.8
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 2.2e-22 109.4 129 47.3
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 2.9e-22 109.0 135 45.9
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 2.5e-21 105.9 129 48.1
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 5.5e-21 104.8 137 48.9
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 7.2e-21 104.4 137 45.3
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 7.2e-21 104.4 142 44.4
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 1.2e-20 103.6 133 45.1
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 1.6e-20 103.2 128 47.7
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 3.6e-20 102.1 129 45.7
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 3.6e-20 102.1 115 49.6
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 6.1e-20 101.3 131 42.0
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 1.4e-19 100.1 131 46.6
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 1.8e-19 99.8 136 45.6
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 4.0e-19 98.6 129 43.4
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 4.0e-19 98.6 132 42.4
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 4.0e-19 98.6 131 45.8
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 4.0e-19 98.6 131 45.8
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 5.2e-19 98.2 129 41.9
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 8.8e-19 97.4 129 45.0
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 8.8e-19 97.4 131 43.5
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 8.8e-19 97.4 128 42.2
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 1.2e-18 97.1 129 42.6
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 1.5e-18 96.7 128 43.0
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 2.0e-18 96.3 132 41.7
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 2.0e-18 96.3 132 43.2
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 3.4e-18 95.5 114 45.6
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 4.4e-18 95.1 134 44.8
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 9.7e-18 94.0 134 43.3
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 9.7e-18 94.0 128 41.4
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 9.7e-18 94.0 142 40.1
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 1.3e-17 93.6 136 42.6
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 1.7e-17 93.2 128 43.0
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 8.3e-17 90.9 129 41.1
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 8.3e-17 90.9 122 41.0
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 1.1e-16 90.5 131 42.0
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 1.4e-16 90.1 129 40.3
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 1.8e-16 89.7 137 40.9
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 2.4e-16 89.4 129 40.3
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 4.1e-16 88.6 130 42.3
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 5.3e-16 88.2 136 41.2
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 5.3e-16 88.2 129 41.9
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 5.3e-16 88.2 135 40.7
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 7.0e-16 87.8 136 39.0
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 7.0e-16 87.8 133 41.4
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 1.2e-15 87.0 134 39.6
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 1.6e-15 86.7 130 42.3
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 1.6e-15 86.7 115 45.2
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.7e-15 85.9 134 40.3
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 4.5e-15 85.1 72 59.7
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 4.5e-15 85.1 75 58.7
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 7.7e-15 84.3 134 39.6
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 7.7e-15 84.3 130 39.2
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 7.7e-15 84.3 130 39.2
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 7.7e-15 84.3 133 37.6
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 7.7e-15 84.3 128 39.1
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 1.3e-14 83.6 71 54.9
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 2.2e-14 82.8 132 39.4
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 2.9e-14 82.4 138 37.0
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 3.8e-14 82.0 121 41.3
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 6.5e-14 81.3 112 43.8
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 8.5e-14 80.9 134 38.1
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 8.5e-14 80.9 133 39.1
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 3.2e-13 79.0 116 39.7
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 4.2e-13 78.6 77 51.9
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.1e-12 76.3 116 37.9
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 4.7e-12 75.1 57 61.4
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 4.4e-10 68.6 136 33.1
Os07g0641800 Oryza sativa ssp. japonica HOM05D007094 ORTHO05D008264 7.5e-10 67.8 49 63.3
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 1.3e-09 67.0 55 60.0
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 2.2e-09 66.2 131 33.6
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 1.1e-08 63.9 114 40.4
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 1.4e-08 63.5 65 49.2
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 2.0e-07 59.7 134 31.3
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 4.5e-07 58.5 99 39.4


User provided reference genes

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