Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 1.7e-257 892.1 437 100.0
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 4.3e-168 595.1 392 79.3
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 4.2e-131 472.2 380 66.3
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 2.8e-82 310.1 413 45.8
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 6.6e-68 262.3 402 43.3
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 2.4e-62 243.8 433 40.4
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 4.7e-58 229.6 403 40.7
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 2.4e-54 217.2 404 39.1
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 1.7e-52 211.1 397 38.8
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 6.6e-52 209.1 397 39.0
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.5e-51 208.0 396 37.9
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 9.9e-48 195.3 390 37.2
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 9.6e-43 178.7 432 33.6
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 3.6e-42 176.8 383 32.6
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 3.1e-41 173.7 400 35.5
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 6.9e-41 172.6 407 34.9
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 9.0e-41 172.2 418 33.5
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 6.4e-39 166.0 422 36.3
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 1.1e-38 165.2 395 36.2
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 2.1e-37 161.0 337 37.1
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 1.5e-35 154.8 391 35.0
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 5.6e-35 152.9 400 31.5
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 2.8e-34 150.6 85 80.0
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 1.1e-33 148.7 414 33.1
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 1.4e-33 148.3 385 32.2
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 1.8e-33 147.9 299 37.5
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 6.9e-33 146.0 352 33.5
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 1.2e-32 145.2 380 30.3
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 2.0e-32 144.4 407 29.7
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 4.5e-32 143.3 353 36.3
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 1.0e-31 142.1 299 36.8
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 1.3e-31 141.7 297 35.7
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.3e-31 141.7 387 30.5
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 6.5e-31 139.4 364 35.4
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.1e-30 138.7 363 34.7
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 5.5e-30 136.3 394 31.7
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 1.2e-29 135.2 371 30.2
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 6.0e-29 132.9 382 31.7
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 1.0e-28 132.1 275 35.6
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 1.0e-28 132.1 410 29.8
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.5e-27 128.3 274 36.1
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.5e-27 127.5 276 36.2
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 1.3e-26 125.2 216 42.1
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 2.1e-26 124.4 275 34.9
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 4.8e-26 123.2 265 32.5
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.1e-25 122.1 278 36.3
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 4.1e-25 120.2 398 30.7
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 6.9e-25 119.4 277 36.1
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 2.6e-24 117.5 390 30.5
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 7.6e-24 115.9 240 36.2
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.2e-23 114.4 187 41.2
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 5.0e-23 113.2 392 28.3
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 8.4e-23 112.5 195 37.9
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 8.4e-23 112.5 379 30.1
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 3.2e-22 110.5 203 37.9
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 3.2e-22 110.5 383 27.9
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 5.5e-22 109.8 396 32.1
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 7.2e-22 109.4 193 38.9
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 3.5e-21 107.1 213 37.6
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 3.5e-21 107.1 386 29.3
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 1.0e-20 105.5 211 37.0
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 1.0e-20 105.5 381 28.9
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 1.3e-20 105.1 213 37.6
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 1.3e-20 105.1 391 29.7
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 8.7e-20 102.4 387 30.0
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 8.7e-20 102.4 397 29.2
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 1.9e-19 101.3 194 35.6
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 2.4e-17 94.4 389 27.2
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 3.1e-17 94.0 160 43.1
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 9.0e-17 92.4 385 28.1
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 1.5e-16 91.7 383 28.2
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 1.3e-15 88.6 353 29.2
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 1.4e-14 85.1 102 48.0
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 1.4e-14 85.1 390 27.4
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 2.5e-14 84.3 98 46.9
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 9.4e-14 82.4 372 26.6
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 9.4e-14 82.4 395 26.8
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 5.1e-12 76.6 159 35.2
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 1.8e-09 68.2 185 31.4
AUR62016627 Chenopodium quinoa HOM05D001841 ORTHO05D001767 2.6e-08 64.3 249 27.7
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 3.4e-08 63.9 185 30.8
AUR62011434 Chenopodium quinoa HOM05D001841 ORTHO05D001767 4.5e-08 63.5 216 29.2
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 2.2e-07 61.2 219 28.3
BcaB06g27216 Brassica carinata HOM05D001841 ORTHO05D001767 8.5e-07 59.3 191 35.1
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 1.4e-06 58.5 145 33.1
Oeu013688.1 Olea europaea HOM05D001841 ORTHO05D001767 1.9e-06 58.2 111 37.8
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 1.9e-06 58.2 205 29.8
HPP92_009515 Vanilla planifolia HOM05D001841 ORTHO05D001767 1.9e-06 58.2 196 31.1
Lsat_1_v5_gn_5_113300 Lactuca sativa HOM05D001841 ORTHO05D001767 3.2e-06 57.4 140 32.9
Cc02_g18570 Coffea canephora HOM05D001841 ORTHO05D001767 4.2e-06 57.0 99 40.4
MSTRG.16762 Avicennia marina HOM05D001841 ORTHO05D001767 7.2e-06 56.2 210 33.3
THA.LOC104803791 Tarenaya hassleriana HOM05D001841 ORTHO05D001767 9.4e-06 55.8 104 41.3


User provided reference genes

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