Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0166400 Salix brachista HOM05D007237 ORTHO05D008854 1.3e-84 316.2 151 100.0
Potri.001G271000 Populus trichocarpa HOM05D007237 ORTHO05D008854 7.9e-53 210.7 110 90.0
Manes.07G003400 Manihot esculenta HOM05D007237 ORTHO05D008854 1.1e-43 180.3 108 77.8
TWI53G0305 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 3.3e-43 178.7 141 63.1
Duzib138G0953 Durio zibethinus HOM05D007237 ORTHO05D008854 9.6e-43 177.2 106 78.3
Manes.10G147700 Manihot esculenta HOM05D007237 ORTHO05D008854 1.3e-42 176.8 110 77.3
Atru.chr11.2633 Acer truncatum HOM05D007237 ORTHO05D008854 6.3e-42 174.5 102 74.5
TWI09G0768 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 1.4e-41 173.3 106 76.4
CiPaw.13G002300 Carya illinoinensis HOM05D007237 ORTHO05D008854 2.4e-41 172.6 106 76.4
Thecc.01G414400 Theobroma cacao HOM05D007237 ORTHO05D008854 3.1e-41 172.2 106 75.5
Ciclev10033078m.g Citrus clementina HOM05D007237 ORTHO05D008854 4.5e-40 168.3 104 71.2
QL04p004894 Quercus lobata HOM05D007237 ORTHO05D008854 1.3e-39 166.8 102 72.5
Gorai.008G105400 Gossypium raimondii HOM05D007237 ORTHO05D008854 2.9e-39 165.6 106 70.8
MSTRG.28082 Avicennia marina HOM05D007237 ORTHO05D008854 3.8e-39 165.2 106 68.9
Gohir.A12G094200 Gossypium hirsutum HOM05D007237 ORTHO05D008854 3.8e-39 165.2 106 70.8
Gorai.004G174300 Gossypium raimondii HOM05D007237 ORTHO05D008854 6.5e-39 164.5 118 66.9
Hma1.2p1_0845F.1_g227580 Hydrangea macrophylla HOM05D007237 ORTHO05D008854 6.5e-39 164.5 97 75.3
Glyma.15G271600 Glycine max HOM05D007237 ORTHO05D008854 8.5e-39 164.1 110 69.1
Sc11g0009340 Simmondsia chinensis HOM05D007237 ORTHO05D008854 1.4e-38 163.3 106 67.9
Gohir.D08G166900 Gossypium hirsutum HOM05D007237 ORTHO05D008854 4.2e-38 161.8 117 66.7
Glyma.08G152200 Glycine max HOM05D007237 ORTHO05D008854 7.2e-38 161.0 110 67.3
Oeu036184.1 Olea europaea HOM05D007237 ORTHO05D008854 7.2e-38 161.0 108 68.5
HanXRQChr16g0519611 Helianthus annuus HOM05D007237 ORTHO05D008854 9.3e-38 160.6 97 72.2
Gohir.A08G146000 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.2e-37 160.2 117 65.8
MD02G1316200 Malus domestica HOM05D007237 ORTHO05D008854 1.6e-37 159.8 98 73.5
arahy.Tifrunner.gnm1.ann1.1X74KR Arachis hypogaea HOM05D007237 ORTHO05D008854 2.7e-37 159.1 100 73.0
ECA234G1833 Erigeron canadensis HOM05D007237 ORTHO05D008854 2.7e-37 159.1 100 69.0
CSS0046270 Camellia sinensis var. sinensis HOM05D007237 ORTHO05D008854 4.6e-37 158.3 103 68.9
Prupe.2G008100 Prunus persica HOM05D007237 ORTHO05D008854 4.6e-37 158.3 98 72.4
HanXRQChr17g0563491 Helianthus annuus HOM05D007237 ORTHO05D008854 1.0e-36 157.1 97 69.1
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 1.3e-36 156.8 85 81.2
Lsat_1_v5_gn_4_46201 Lactuca sativa HOM05D007237 ORTHO05D008854 1.8e-36 156.4 97 71.1
Dinv43468 Davidia involucrata HOM05D007237 ORTHO05D008854 3.0e-36 155.6 99 67.7
Peaxi162Scf00428g01024 Petunia axillaris HOM05D007237 ORTHO05D008854 3.0e-36 155.6 96 72.9
Lalb_Chr03g0033911 Lupinus albus HOM05D007237 ORTHO05D008854 3.9e-36 155.2 106 68.9
Eucgr.J01258 Eucalyptus grandis HOM05D007237 ORTHO05D008854 6.7e-36 154.5 99 70.7
Psat5g205480 Pisum sativum HOM05D007237 ORTHO05D008854 1.1e-35 153.7 100 67.0
CAN.G1393.1 Capsicum annuum HOM05D007237 ORTHO05D008854 2.5e-35 152.5 96 71.9
SalBow4G0796 Salvia bowleyana HOM05D007237 ORTHO05D008854 2.5e-35 152.5 95 67.4
Oeu036183.1 Olea europaea HOM05D000288 ORTHO05D008854 3.3e-35 152.1 103 68.0
FvH4_7g00620 Fragaria vesca HOM05D007237 ORTHO05D008854 4.3e-35 151.8 99 68.7
Migut.O00928 Erythranthe guttata HOM05D007237 ORTHO05D008854 5.7e-35 151.4 100 69.0
MD07G1005700 Malus domestica HOM05D007237 ORTHO05D008854 5.7e-35 151.4 96 71.9
SGA_v2.0_scaffold4G02250 Striga asiatica HOM05D000288 ORTHO05D000173 5.7e-35 151.4 105 65.7
CANSAT21G0694 Cannabis sativa HOM05D007237 ORTHO05D008854 7.4e-35 151.0 98 74.5
Lalb_Chr20g0108101 Lupinus albus HOM05D007237 ORTHO05D008854 7.4e-35 151.0 95 68.4
SGA_v2.0_scaffold95G28787 Striga asiatica HOM05D000288 ORTHO05D000173 7.4e-35 151.0 96 71.9
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 2.2e-34 149.4 86 73.3
RcHm_v2.0_Chr1g0314811 Rosa chinensis HOM05D007237 ORTHO05D008854 4.8e-34 148.3 101 68.3
vmacro13649 Vaccinium macrocarpon HOM05D000102 ORTHO05D000138 4.8e-34 148.3 83 77.1
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.1e-33 147.1 105 64.8
ATR0605G218 Amborella trichopoda HOM05D007237 ORTHO05D008854 1.4e-33 146.7 93 67.7
Aqoxy2G00108 Aquilegia oxysepala HOM05D007237 ORTHO05D008854 1.8e-33 146.4 108 61.1
Actinidia31685 Actinidia chinensis HOM05D007237 ORTHO05D008854 2.4e-33 146.0 104 65.4
HanXRQChr11g0330541 Helianthus annuus HOM05D007237 ORTHO05D008854 2.4e-33 146.0 100 64.0
Sopen01g033840 Solanum pennellii HOM05D007237 ORTHO05D008854 3.1e-33 145.6 102 65.7
Ah.12g061430 Amaranthus hybridus HOM05D000016 ORTHO05D000433 5.3e-33 144.8 91 69.2
Solyc01g086830.4 Solanum lycopersicum HOM05D007237 ORTHO05D008854 5.3e-33 144.8 102 64.7
arahy.Tifrunner.gnm1.ann1.CQ9Q2Z Arachis hypogaea HOM05D007237 ORTHO05D008854 6.9e-33 144.4 117 61.5
arahy.Tifrunner.gnm1.ann1.PP9VDR Arachis hypogaea HOM05D007237 ORTHO05D008854 6.9e-33 144.4 101 66.3
Medtr3g027590 Medicago truncatula HOM05D007237 ORTHO05D008854 6.9e-33 144.4 97 63.9
TPR.G12234 Trifolium pratense HOM05D007237 ORTHO05D008854 6.9e-33 144.4 95 66.3
Cc02_g27480 Coffea canephora HOM05D007237 ORTHO05D008854 2.6e-32 142.5 101 65.3
Prupe.2G008300 Prunus persica HOM05D007237 ORTHO05D008854 2.6e-32 142.5 100 63.0
EL10Ac2g04307 Beta vulgaris HOM05D007237 ORTHO05D008854 3.4e-32 142.1 97 66.0
PGR044G2203 Punica granatum HOM05D007237 ORTHO05D008854 4.5e-32 141.7 103 63.1
Lj3g0027771 Lotus japonicus HOM05D007237 ORTHO05D008854 7.7e-32 141.0 98 68.4
MBI04_g14266_MAGBIO Magnolia biondii HOM05D007237 ORTHO05D008854 1.1e-30 137.1 98 62.2
Sed0015658 Sechium edule HOM05D007237 ORTHO05D008854 1.4e-30 136.7 102 58.8
THA.LOC104825138 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 4.2e-30 135.2 82 68.3
PSO017G6688 Papaver somniferum HOM05D007237 ORTHO05D008854 7.2e-30 134.4 86 68.6
Sp5g10150 Schrenkiella parvula HOM05D007237 ORTHO05D008854 1.6e-29 133.3 121 52.9
C08p27400 Brassica napus HOM05D007237 ORTHO05D008854 2.1e-29 132.9 142 47.2
C05p59860 Brassica napus HOM05D007237 ORTHO05D008854 3.6e-29 132.1 92 64.1
BolC5t34640H Brassica oleracea HOM05D007237 ORTHO05D008854 3.6e-29 132.1 92 64.1
BolC8t50357H Brassica oleracea HOM05D007237 ORTHO05D008854 4.6e-29 131.7 141 47.5
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 4.6e-29 131.7 96 61.5
CARHR161870 Cardamine hirsuta HOM05D007237 ORTHO05D008854 6.1e-29 131.3 122 52.5
Phvul.005G037300 Phaseolus vulgaris HOM05D007237 ORTHO05D008854 6.1e-29 131.3 95 63.2
AL5G32700 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 1.0e-28 130.6 123 51.2
Carub.0005s1847 Capsella rubella HOM05D007237 ORTHO05D008854 1.0e-28 130.6 77 70.1
Thhalv10010991m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 1.0e-28 130.6 77 68.8
A09p45190 Brassica napus HOM05D007237 ORTHO05D008854 1.4e-28 130.2 77 70.1
BraA03t13972Z Brassica rapa HOM05D007237 ORTHO05D008854 1.4e-28 130.2 112 53.6
BraA09t39982Z Brassica rapa HOM05D007237 ORTHO05D008854 1.4e-28 130.2 77 70.1
Aa31LG10G7220 Aethionema arabicum HOM05D007237 ORTHO05D008854 1.8e-28 129.8 77 68.8
Ah.12g052640 Amaranthus hybridus HOM05D000491 ORTHO05D008854 1.8e-28 129.8 86 64.0
BcaC06g33382 Brassica carinata HOM05D007237 ORTHO05D008854 1.8e-28 129.8 77 70.1
A03p48720 Brassica napus HOM05D007237 ORTHO05D008854 1.8e-28 129.8 77 70.1
C07p46810 Brassica napus HOM05D007237 ORTHO05D008854 1.8e-28 129.8 77 70.1
BolC7t45198H Brassica oleracea HOM05D007237 ORTHO05D008854 1.8e-28 129.8 77 70.1
Thhalv10022125m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 1.8e-28 129.8 77 71.4
BraA05t22806Z Brassica rapa HOM05D007237 ORTHO05D008854 2.3e-28 129.4 92 63.0
A05p40750 Brassica napus HOM05D007237 ORTHO05D008854 3.0e-28 129.0 92 63.0
BcaNung06095 Brassica carinata HOM05D007237 ORTHO05D008854 5.1e-28 128.3 121 50.4
Carub.0003s0700 Capsella rubella HOM05D007237 ORTHO05D008854 6.7e-28 127.9 92 60.9
AL3G18770 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 8.8e-28 127.5 96 57.3
CARHR082100 Cardamine hirsuta HOM05D007237 ORTHO05D008854 1.5e-27 126.7 92 60.9
Haze_03241 Corylus avellana HOM05D007237 ORTHO05D008854 2.0e-27 126.3 82 70.7
BcaC02g09277 Brassica carinata HOM05D007237 ORTHO05D008854 2.6e-27 125.9 112 51.8
C04p40790 Brassica napus HOM05D007237 ORTHO05D008854 2.6e-27 125.9 112 51.8
AT3G07450 Arabidopsis thaliana HOM05D007237 ORTHO05D008854 3.3e-27 125.6 92 60.9
A03p35260 Brassica napus HOM05D007237 ORTHO05D008854 3.3e-27 125.6 92 57.6
BcaC01g04282 Brassica carinata HOM05D007237 ORTHO05D008854 4.4e-27 125.2 92 57.6
A04p07230 Brassica napus HOM05D007237 ORTHO05D008854 4.4e-27 125.2 77 66.2
BraA03t12704Z Brassica rapa HOM05D007237 ORTHO05D008854 4.4e-27 125.2 92 57.6
C03p42880 Brassica napus HOM05D007237 ORTHO05D008854 5.7e-27 124.8 92 57.6
BolC3t16556H Brassica oleracea HOM05D007237 ORTHO05D008854 5.7e-27 124.8 92 57.6
BcaB03g14701 Brassica carinata HOM05D007237 ORTHO05D008854 1.3e-26 123.6 93 54.8
ClCG09G004370 Citrullus lanatus HOM05D007237 ORTHO05D008854 8.2e-26 120.9 97 52.6
THA.LOC104820127 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 8.2e-26 120.9 99 57.6
MELO3C023529.2 Cucumis melo HOM05D007237 ORTHO05D008854 9.1e-25 117.5 97 49.5
CsaV3_7G031300 Cucumis sativus L. HOM05D007237 ORTHO05D008854 9.1e-25 117.5 97 51.5
Rhsim07G0053900 Rhododendron simsii HOM05D000102 ORTHO05D000138 6.5e-23 111.3 59 79.7
BcaC05g29536 Brassica carinata HOM05D007237 ORTHO05D008854 1.9e-22 109.8 78 62.8
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 1.2e-21 107.1 111 48.6
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 1.2e-21 107.1 111 48.6
Sed0001876 Sechium edule HOM05D007237 ORTHO05D008854 1.0e-20 104.0 97 44.3
CDE10G0734 Ceratophyllum demersum HOM05D007237 ORTHO05D008854 5.7e-19 98.2 79 48.1
SHI04057 Sapria himalayana HOM05D007237 ORTHO05D008854 4.8e-18 95.1 96 46.9
Phvul.007G001800 Phaseolus vulgaris HOM05D001848 ORTHO05D001295 1.7e-07 60.1 99 33.3
Glyma.20G248700 Glycine max HOM05D001848 ORTHO05D001295 2.2e-07 59.7 93 35.5
Glyma.10G297600 Glycine max HOM05D001848 ORTHO05D001295 8.5e-07 57.8 99 29.3
arahy.Tifrunner.gnm1.ann1.FN75LP Arachis hypogaea HOM05D001848 ORTHO05D001295 1.1e-06 57.4 109 32.1
Haze_11072 Corylus avellana HOM05D001848 ORTHO05D001295 1.1e-06 57.4 93 33.3
TWI38G0794 Tripterygium wilfordii HOM05D001848 ORTHO05D001295 1.1e-06 57.4 91 36.3
Rhsim12G0036500 Rhododendron simsii HOM05D001848 ORTHO05D001295 1.5e-06 57.0 98 35.7
Atru.chr3.1703 Acer truncatum HOM05D001848 ORTHO05D001295 4.2e-06 55.5 93 32.3
Cfa008554 Carpinus fangiana HOM05D001848 ORTHO05D001295 4.2e-06 55.5 100 31.0
EL10Ac5g10632 Beta vulgaris HOM05D001848 ORTHO05D001295 7.2e-06 54.7 98 29.6
Sc17g0001740 Simmondsia chinensis HOM05D001848 ORTHO05D001295 7.2e-06 54.7 58 43.1
TAR636G3109 Trochodendron aralioides HOM05D001848 ORTHO05D001295 9.4e-06 54.3 95 29.5
GSVIVG01031677001 Vitis vinifera HOM05D001848 ORTHO05D001295 9.4e-06 54.3 93 37.6


User provided reference genes

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