Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 1.6e-269 932.2 463 100.0
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.1e-197 692.6 360 96.9
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 5.2e-180 634.8 362 89.8
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.4e-177 625.9 364 89.3
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 1.2e-152 543.9 361 78.1
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 2.1e-152 543.1 362 76.2
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 5.2e-148 528.5 364 75.0
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 8.9e-148 527.7 364 74.7
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.9e-145 520.0 362 74.6
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 7.1e-145 518.1 362 72.9
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.6e-144 516.9 362 74.3
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 2.1e-144 516.5 363 74.9
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 2.7e-144 516.2 362 73.2
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 4.6e-144 515.4 367 71.9
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.3e-143 513.8 362 74.0
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 3.0e-143 512.7 363 74.4
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 5.1e-143 511.9 383 68.7
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 8.6e-143 511.1 362 73.8
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.5e-142 510.4 359 71.6
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 9.6e-142 507.7 363 73.8
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 3.1e-140 502.7 359 71.3
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 6.8e-140 501.5 359 71.0
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 7.6e-139 498.0 362 69.6
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 1.3e-138 497.3 362 71.8
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.7e-138 496.9 357 72.0
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 3.8e-138 495.7 363 72.2
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 4.9e-138 495.4 361 72.6
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 6.4e-138 495.0 366 70.2
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.2e-137 492.7 370 69.7
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 4.2e-137 492.3 359 72.7
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 4.2e-137 492.3 362 70.7
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 4.2e-137 492.3 348 71.8
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 7.1e-137 491.5 367 71.4
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 9.3e-137 491.1 327 76.8
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 3.5e-136 489.2 360 71.1
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 4.6e-136 488.8 368 66.3
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 4.6e-136 488.8 366 69.7
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 7.8e-136 488.0 362 70.4
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 7.8e-136 488.0 364 70.9
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 7.8e-136 488.0 362 70.4
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 1.0e-135 487.6 362 71.8
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 1.7e-135 486.9 363 71.1
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 6.6e-135 485.0 359 70.5
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 7.3e-134 481.5 364 70.6
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 1.3e-133 480.7 364 70.3
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 3.6e-133 479.2 326 70.9
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 4.8e-133 478.8 357 69.5
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 4.8e-133 478.8 385 63.6
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.1e-132 477.6 364 67.9
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 4.0e-132 475.7 322 77.0
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 1.2e-131 474.2 355 64.5
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.2e-131 474.2 380 65.8
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 3.4e-131 472.6 327 73.4
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 9.9e-131 471.1 364 67.9
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 9.9e-131 471.1 362 65.2
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 1.7e-130 470.3 330 74.8
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.1e-129 467.6 362 64.9
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.9e-129 466.8 359 67.7
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 2.4e-129 466.5 329 72.9
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.2e-129 466.1 329 72.9
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 1.6e-128 463.8 327 73.4
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 2.1e-128 463.4 429 61.3
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 4.6e-128 462.2 357 68.3
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 6.0e-128 461.8 358 63.1
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.7e-127 460.3 364 66.5
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 2.3e-127 459.9 351 69.5
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 5.1e-127 458.8 360 67.8
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 5.1e-127 458.8 329 72.0
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.3e-125 454.1 357 66.7
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.4e-124 450.7 360 66.1
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 2.4e-124 449.9 360 65.6
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 6.9e-124 448.4 352 64.2
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 2.6e-123 446.4 359 66.0
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 7.6e-123 444.9 361 66.2
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 1.3e-122 444.1 357 66.4
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 2.2e-122 443.4 363 65.0
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.9e-121 440.3 365 63.6
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 2.4e-121 439.9 348 67.8
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 2.4e-121 439.9 344 66.6
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 9.3e-121 438.0 431 56.8
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 4.6e-120 435.6 359 63.8
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 7.9e-120 434.9 375 62.4
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 1.3e-119 434.1 353 65.2
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 1.3e-119 434.1 361 64.5
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 1.3e-119 434.1 362 64.1
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 1.8e-119 433.7 344 66.0
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.8e-119 433.7 359 63.0
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 5.6e-118 428.7 359 61.8
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 5.6e-118 428.7 365 63.0
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 1.4e-116 424.1 329 68.1
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 3.1e-116 422.9 298 75.8
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 6.9e-116 421.8 360 63.6
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 9.0e-116 421.4 359 58.2
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 5.8e-115 418.7 252 75.8
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 4.9e-114 415.6 330 67.0
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 4.9e-114 415.6 365 61.9
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 1.1e-113 414.5 358 62.0
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 5.5e-113 412.1 328 66.2
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 4.6e-112 409.1 328 67.4
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 7.9e-112 408.3 326 68.4
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 1.1e-110 404.4 326 68.1
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 5.7e-110 402.1 359 58.2
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 2.8e-109 399.8 360 58.6
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 6.9e-108 395.2 325 64.3
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 1.5e-107 394.0 360 58.9
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 1.5e-107 394.0 357 58.5
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 3.4e-107 392.9 367 59.4
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 4.5e-107 392.5 325 64.3
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.7e-106 390.6 272 67.6
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 2.2e-106 390.2 359 56.5
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 5.0e-106 389.0 357 56.6
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 6.5e-106 388.7 357 58.3
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 1.4e-105 387.5 345 58.8
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 3.2e-105 386.3 327 64.2
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 1.6e-104 384.0 348 58.6
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 2.7e-104 383.3 345 58.8
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.3e-101 374.4 293 68.9
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.1e-100 369.8 348 61.2
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 3.4e-99 366.3 301 66.1
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 1.1e-97 361.3 353 49.9
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 1.6e-96 357.5 226 71.2
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.6e-96 357.5 418 49.3
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 6.7e-95 352.1 296 64.2
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 6.7e-95 352.1 348 54.6
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 2.6e-94 350.1 336 56.8
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 9.7e-94 348.2 276 65.6
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.2e-93 347.1 333 55.6
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 7.7e-91 338.6 327 52.3
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.7e-90 337.4 298 63.4
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.2e-90 337.0 284 58.5
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.9e-90 336.7 363 57.0
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 5.0e-90 335.9 189 76.7
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.9e-89 334.0 359 53.8
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 4.2e-89 332.8 252 61.5
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 3.0e-87 326.6 359 51.0
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.5e-86 324.3 333 48.9
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.2e-85 320.5 328 55.8
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 1.6e-83 314.3 330 55.5
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 1.3e-82 311.2 333 55.3
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 2.5e-81 307.0 328 48.2
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 5.5e-81 305.8 330 53.3
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 5.5e-81 305.8 329 53.2
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 1.2e-80 304.7 195 70.3
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 1.6e-80 304.3 330 55.2
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 4.7e-80 302.8 361 47.4
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 1.8e-79 300.8 333 52.0
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 4.0e-79 299.7 335 54.0
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 2.0e-78 297.4 328 53.7
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 2.6e-78 297.0 330 52.4
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 2.8e-77 293.5 331 52.3
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 4.8e-77 292.7 331 52.6
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 1.6e-75 287.7 323 51.1
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 7.7e-75 285.4 333 51.7
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 1.0e-74 285.0 338 50.3
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 4.1e-68 263.1 190 63.7
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 4.5e-59 233.0 229 45.9
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 5.9e-59 232.6 329 44.1
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 1.3e-58 231.5 330 44.2
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.7e-54 216.1 167 60.5
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 1.4e-52 211.5 116 83.6
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 1.2e-51 208.4 377 38.2
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 2.7e-51 207.2 319 42.3
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 6.6e-50 202.6 109 84.4
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.3e-42 178.3 93 83.9
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 9.6e-17 92.4 119 37.8
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 4.5e-14 83.6 67 73.1
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 1.3e-13 82.0 38 86.8
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 1.7e-13 81.6 48 70.8
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 7.1e-12 76.3 42 85.7
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 9.6e-09 65.9 44 70.5
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 3.7e-08 63.9 45 68.9
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 4.8e-08 63.5 40 75.0
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 4.8e-08 63.5 40 75.0
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 1.8e-07 61.6 82 45.1
FAN10G2408 Fragaria x ananassa HOM05D003920 ORTHO05D017698 5.3e-07 60.1 49 63.3
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 2.6e-06 57.8 29 86.2
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 4.5e-06 57.0 32 84.4


User provided reference genes

Program Settings