Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 9.7e-83 310.1 153 100.0
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 5.9e-40 167.9 117 75.2
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 2.5e-30 136.0 95 72.6
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 5.6e-30 134.8 112 63.4
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 6.2e-29 131.3 124 54.0
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 1.4e-28 130.2 115 61.7
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.8e-28 129.8 98 69.4
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 6.8e-28 127.9 100 62.0
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 8.9e-28 127.5 100 62.0
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 8.9e-28 127.5 86 69.8
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.2e-27 127.1 131 49.6
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 1.2e-27 127.1 124 54.8
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.5e-27 126.7 94 66.0
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 4.4e-27 125.2 119 57.1
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 4.4e-27 125.2 125 56.8
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 7.5e-27 124.4 115 59.1
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 1.3e-26 123.6 118 54.2
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 2.2e-26 122.9 115 60.9
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 2.2e-26 122.9 123 56.1
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 2.2e-26 122.9 87 66.7
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 2.9e-26 122.5 92 60.9
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 4.9e-26 121.7 86 66.3
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 4.9e-26 121.7 115 53.9
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 1.4e-25 120.2 85 69.4
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.4e-25 120.2 121 56.2
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 1.9e-25 119.8 105 53.3
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.9e-25 119.8 126 54.0
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 3.2e-25 119.0 126 49.2
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 5.4e-25 118.2 141 53.2
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.6e-24 116.7 126 52.4
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 2.7e-24 115.9 109 56.9
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 2.7e-24 115.9 87 67.8
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.3e-23 113.6 141 51.8
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.7e-23 113.2 128 51.6
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.7e-23 113.2 139 51.8
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 3.0e-23 112.5 115 55.7
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 3.0e-23 112.5 138 48.6
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 5.0e-23 111.7 139 51.1
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.5e-22 110.2 109 58.7
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 2.5e-22 109.4 118 55.1
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.5e-22 109.4 80 66.2
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 4.3e-22 108.6 121 49.6
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 5.6e-22 108.2 120 52.5
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 7.3e-22 107.8 121 51.2
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 7.3e-22 107.8 116 51.7
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.1e-20 104.0 128 44.5
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.1e-20 104.0 119 55.5
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 6.8e-20 101.3 112 52.7
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 6.8e-20 101.3 112 52.7
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 6.8e-20 101.3 116 48.3
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.5e-19 100.1 120 46.7
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 2.6e-19 99.4 116 49.1
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 2.6e-19 99.4 123 48.8
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.6e-19 99.4 112 50.9
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 2.6e-19 99.4 99 52.5
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 7.5e-19 97.8 116 49.1
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 9.8e-19 97.4 115 55.7
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 9.8e-19 97.4 74 63.5
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.3e-18 97.1 89 58.4
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 2.2e-18 96.3 80 61.2
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.2e-18 96.3 89 57.3
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 2.9e-18 95.9 120 47.5
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 3.7e-18 95.5 119 48.7
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 4.9e-18 95.1 124 48.4
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 6.4e-18 94.7 97 52.6
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 4.1e-17 92.0 83 59.0
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 5.4e-17 91.7 121 49.6
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 5.4e-17 91.7 87 56.3
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 7.1e-17 91.3 90 58.9
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 1.6e-16 90.1 90 57.8
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.1e-16 89.7 100 54.0
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 2.7e-16 89.4 119 48.7
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.6e-16 88.6 119 48.7
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 5.6e-14 81.6 115 45.2
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 2.1e-13 79.7 87 52.9
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.8e-13 79.3 87 52.9
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 4.7e-13 78.6 115 44.3
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 4.7e-13 78.6 83 57.8
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 4.7e-13 78.6 87 54.0
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.4e-12 77.0 112 48.2
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 4.0e-12 75.5 117 44.4
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.0e-12 75.5 112 44.6
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 5.2e-12 75.1 119 45.4
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.2e-11 73.9 134 40.3
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 2.6e-11 72.8 114 40.4
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 4.4e-11 72.0 119 43.7
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 7.6e-11 71.2 118 44.1
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 9.9e-11 70.9 116 43.1
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 9.9e-11 70.9 91 50.5
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.3e-10 70.5 136 40.4
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.3e-10 70.5 136 40.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.9e-10 68.6 105 39.0
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.9e-09 66.6 98 43.9
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.9e-09 66.6 96 44.8
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 3.2e-09 65.9 78 52.6
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.2e-08 63.9 108 38.9
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 3.5e-08 62.4 82 46.3
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.1e-07 58.5 78 47.4
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 5.1e-07 58.5 44 63.6
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.1e-06 57.4 93 43.0


User provided reference genes

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