Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 1.2e-178 629.8 323 100.0
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 9.2e-67 258.1 192 77.1
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.1e-32 144.8 192 51.0
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.9e-32 144.1 184 51.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 3.7e-31 139.8 193 48.2
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 5.3e-30 136.0 196 46.9
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 6.9e-30 135.6 196 48.5
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 9.0e-30 135.2 194 49.0
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.5e-29 134.4 193 47.2
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 1.5e-29 134.4 180 51.1
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 4.5e-29 132.9 191 48.2
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 7.6e-29 132.1 189 48.1
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 7.6e-29 132.1 196 48.5
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 1.3e-28 131.3 184 49.5
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 6.4e-28 129.0 196 45.9
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 3.2e-27 126.7 187 46.5
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 4.2e-27 126.3 196 46.4
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.6e-26 124.4 179 44.7
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.6e-26 124.4 179 44.7
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.5e-26 123.2 195 45.6
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 7.9e-26 122.1 195 45.1
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.3e-25 121.3 178 46.1
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.9e-24 117.5 192 46.4
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.9e-24 117.5 192 46.4
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.9e-24 117.5 192 46.4
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 2.1e-23 114.0 196 46.9
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 2.8e-23 113.6 181 43.6
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 4.8e-23 112.8 183 45.9
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 8.2e-23 112.1 178 41.0
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 1.8e-22 110.9 184 45.1
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 2.4e-22 110.5 202 45.0
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 3.1e-22 110.2 181 43.1
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.1e-22 110.2 122 58.2
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 4.0e-22 109.8 180 47.2
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 9.0e-22 108.6 192 44.3
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.2e-21 108.2 154 46.1
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.2e-21 108.2 154 46.1
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.5e-21 107.8 186 45.7
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 4.5e-21 106.3 186 45.2
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.0e-20 105.1 164 45.7
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.7e-20 104.4 179 43.0
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 1.7e-20 104.4 151 50.3
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.8e-20 103.2 134 51.5
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 8.4e-20 102.1 156 46.2
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.1e-19 101.7 142 48.6
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.4e-19 101.3 209 42.6
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.9e-19 100.9 196 43.9
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.9e-19 100.9 139 49.6
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 1.2e-18 98.2 156 44.9
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.1e-18 97.4 133 48.1
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 2.1e-18 97.4 161 46.6
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 2.1e-18 97.4 191 40.3
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.3e-17 94.7 175 42.9
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.3e-17 94.7 207 41.5
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 1.3e-17 94.7 201 43.8
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 1.8e-17 94.4 188 41.5
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 3.0e-17 93.6 112 57.1
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 5.1e-17 92.8 126 49.2
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 6.7e-17 92.4 121 54.5
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.9e-16 90.9 182 37.9
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 3.3e-16 90.1 188 38.3
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 9.7e-16 88.6 111 49.5
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.2e-15 87.4 151 45.7
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.2e-15 87.4 125 48.8
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 3.7e-15 86.7 189 36.5
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 3.7e-15 86.7 109 51.4
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 3.7e-15 86.7 106 48.1
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 3.7e-15 86.7 174 37.9
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 4.8e-15 86.3 199 38.7
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 6.3e-15 85.9 197 39.1
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 6.3e-15 85.9 168 39.9
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.1e-14 85.1 199 36.7
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.4e-14 84.7 204 34.8
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.4e-14 84.7 199 36.7
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 5.3e-14 82.8 156 42.9
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 5.3e-14 82.8 156 42.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 5.3e-14 82.8 156 42.9
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 5.3e-14 82.8 177 36.2
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 2.6e-13 80.5 157 41.4
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 5.9e-13 79.3 189 36.0
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 7.7e-13 79.0 207 38.2
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.7e-12 77.8 167 38.9
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 2.9e-12 77.0 124 43.5
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.8e-12 76.6 150 36.7
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 3.8e-12 76.6 199 36.2
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.8e-12 76.6 194 39.2
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.9e-11 74.3 188 36.2
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 2.5e-11 73.9 168 39.3
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 4.2e-11 73.2 214 32.2
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 7.2e-11 72.4 186 33.9
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 7.2e-11 72.4 178 41.0
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 7.9e-10 68.9 190 33.7
Potri.009G034951 Populus trichocarpa HOM05D007264 ORTHO05D008639 7.9e-10 68.9 70 62.9
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.0e-09 68.6 144 36.1
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 1.0e-09 68.6 184 32.6
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.4e-09 68.2 148 34.5
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 2.3e-09 67.4 130 42.3
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 3.7e-07 60.1 88 46.6
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 4.8e-07 59.7 177 33.3
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 5.3e-06 56.2 169 33.1
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 6.9e-06 55.8 171 31.0


User provided reference genes

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