Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0146700 Salix brachista HOM05D000470 ORTHO05D350027 7.9e-35 149.8 72 100.0
Lsat_1_v5_gn_1_30920 Lactuca sativa HOM05D000470 ORTHO05D000348 2.6e-14 81.6 50 80.0
vmacro19060 Vaccinium macrocarpon HOM05D000470 ORTHO05D000348 1.7e-13 79.0 53 71.7
ECA247G0017 Erigeron canadensis HOM05D000470 ORTHO05D000348 3.8e-13 77.8 50 76.0
Potri.003G183600 Populus trichocarpa HOM05D000470 ORTHO05D000348 3.8e-13 77.8 50 76.0
Sabra01G0029700 Salix brachista HOM05D000470 ORTHO05D000348 3.8e-13 77.8 50 74.0
Ciclev10025612m.g Citrus clementina HOM05D000470 ORTHO05D000348 5.0e-13 77.4 50 74.0
COL.COLO4_26746 Corchorus olitorius HOM05D000470 ORTHO05D000348 5.0e-13 77.4 50 74.0
Gohir.A06G114600 Gossypium hirsutum HOM05D000470 ORTHO05D000348 5.0e-13 77.4 50 72.0
Gohir.D06G119200 Gossypium hirsutum HOM05D000470 ORTHO05D000348 5.0e-13 77.4 50 72.0
Gorai.010G136800 Gossypium raimondii HOM05D000470 ORTHO05D000348 5.0e-13 77.4 50 72.0
Manes.04G101500 Manihot esculenta HOM05D000470 ORTHO05D000348 5.0e-13 77.4 50 76.0
Duzib235G0162 Durio zibethinus HOM05D000470 ORTHO05D000348 6.5e-13 77.0 50 72.0
Thecc.06G043600 Theobroma cacao HOM05D000470 ORTHO05D000348 6.5e-13 77.0 50 72.0
Dinv03574 Davidia involucrata HOM05D000470 ORTHO05D000348 8.5e-13 76.6 50 72.0
Potri.001G043200 Populus trichocarpa HOM05D000470 ORTHO05D000348 1.1e-12 76.3 50 74.0
Sabra03G0134000 Salix brachista HOM05D000470 ORTHO05D000348 1.1e-12 76.3 50 74.0
Atru.chr1.2787 Acer truncatum HOM05D000470 ORTHO05D000348 1.4e-12 75.9 50 76.0
Hma1.2p1_0109F.1_g052650 Hydrangea macrophylla HOM05D000470 ORTHO05D000348 1.4e-12 75.9 50 72.0
SGA_v2.0_scaffold5G02791 Striga asiatica HOM05D000470 ORTHO05D000348 2.5e-12 75.1 50 72.0
Actinidia18252 Actinidia chinensis HOM05D000470 ORTHO05D000348 3.2e-12 74.7 50 70.0
Cc04_g05200 Coffea canephora HOM05D000470 ORTHO05D000348 3.2e-12 74.7 50 74.0
Manes.11G068600 Manihot esculenta HOM05D000470 ORTHO05D000348 3.2e-12 74.7 50 72.0
Oeu004563.2 Olea europaea HOM05D000470 ORTHO05D000348 3.2e-12 74.7 50 72.0
Actinidia25474 Actinidia chinensis HOM05D000470 ORTHO05D000348 4.2e-12 74.3 50 70.0
Cpa.g.sc10.64 Carica papaya HOM05D000470 ORTHO05D000348 4.2e-12 74.3 50 72.0
CANSAT56G3718 Cannabis sativa HOM05D000470 ORTHO05D000348 5.5e-12 73.9 50 68.0
QL05p036356 Quercus lobata HOM05D000470 ORTHO05D000348 5.5e-12 73.9 50 70.0
CiPaw.02G162700 Carya illinoinensis HOM05D000470 ORTHO05D000348 7.2e-12 73.6 50 70.0
Oeu051566.1 Olea europaea HOM05D000470 ORTHO05D000348 9.4e-12 73.2 50 72.0
Lalb_Chr24g0392811 Lupinus albus HOM05D000470 ORTHO05D000348 1.2e-11 72.8 50 70.0
SGA_v2.0_scaffold37G14691 Striga asiatica HOM05D000470 ORTHO05D000348 1.2e-11 72.8 50 72.0
HanXRQChr07g0188011 Helianthus annuus HOM05D000470 ORTHO05D000348 1.6e-11 72.4 51 68.6
Rhsim08G0204400 Rhododendron simsii HOM05D000470 ORTHO05D000348 1.6e-11 72.4 50 72.0
SalBow7G1154 Salvia bowleyana HOM05D000470 ORTHO05D000348 1.6e-11 72.4 50 72.0
Haze_16676 Corylus avellana HOM05D000470 ORTHO05D000348 2.7e-11 71.6 50 66.0
Migut.I00686 Erythranthe guttata HOM05D000470 ORTHO05D000348 2.7e-11 71.6 50 70.0
Nitab4.5_0008962g0020 Nicotiana tabacum HOM05D000470 ORTHO05D000348 2.7e-11 71.6 50 66.0
CSS0031277 Camellia sinensis var. sinensis HOM05D000470 ORTHO05D000348 3.6e-11 71.2 50 70.0
ECA246G3628 Erigeron canadensis HOM05D000470 ORTHO05D000348 4.6e-11 70.9 50 66.0
TWI75G0554 Tripterygium wilfordii HOM05D000470 ORTHO05D000348 4.6e-11 70.9 50 70.0
MSTRG.22802 Avicennia marina HOM05D000470 ORTHO05D000348 6.1e-11 70.5 50 68.0
Cfa001872 Carpinus fangiana HOM05D000470 ORTHO05D000348 6.1e-11 70.5 50 66.0
Solyc06g068490.3 Solanum lycopersicum HOM05D000470 ORTHO05D000348 6.1e-11 70.5 50 64.0
Sopen06g025740 Solanum pennellii HOM05D000470 ORTHO05D000348 6.1e-11 70.5 50 64.0
PGSC0003DMG401028489 Solanum tuberosum HOM05D000470 ORTHO05D000348 6.1e-11 70.5 50 64.0
Nitab4.5_0000886g0030 Nicotiana tabacum HOM05D000470 ORTHO05D000348 7.9e-11 70.1 50 64.0
TWI18G1038 Tripterygium wilfordii HOM05D000470 ORTHO05D000348 7.9e-11 70.1 50 70.0
CAN.G1932.5 Capsicum annuum HOM05D000470 ORTHO05D000348 1.0e-10 69.7 50 64.0
CiPaw.01G255500 Carya illinoinensis HOM05D000470 ORTHO05D000348 1.0e-10 69.7 50 68.0
DCAR_025554 Daucus carota HOM05D000470 ORTHO05D000348 1.0e-10 69.7 50 62.0
Duzib192G0862 Durio zibethinus HOM05D000470 ORTHO05D000348 1.0e-10 69.7 50 68.0
Glyma.13G370900 Glycine max HOM05D000470 ORTHO05D000348 1.8e-10 68.9 50 66.0
VMungo1080G1689 Vigna mungo HOM05D000470 ORTHO05D000348 1.8e-10 68.9 50 66.0
MELO3C026733.2 Cucumis melo HOM05D000470 ORTHO05D000348 2.3e-10 68.6 51 70.6
Lj3g0021539 Lotus japonicus HOM05D000470 ORTHO05D000348 2.3e-10 68.6 50 66.0
CsaV3_3G032740 Cucumis sativus L. HOM05D000470 ORTHO05D000348 3.0e-10 68.2 51 70.6
Phvul.005G183100 Phaseolus vulgaris HOM05D000470 ORTHO05D000348 3.0e-10 68.2 50 66.0
ClCG10G012880 Citrullus lanatus HOM05D000470 ORTHO05D000348 3.9e-10 67.8 51 68.6
MD09G1225700 Malus domestica HOM05D000470 ORTHO05D000348 3.9e-10 67.8 53 66.0
Peaxi162Scf00207g00428 Petunia axillaris HOM05D000470 ORTHO05D000348 3.9e-10 67.8 50 64.0
arahy.Tifrunner.gnm1.ann1.XNKC70 Arachis hypogaea HOM05D000470 ORTHO05D000348 5.1e-10 67.4 50 62.0
THA.LOC104813589 Tarenaya hassleriana HOM05D000470 ORTHO05D000348 5.1e-10 67.4 50 64.0
Glyma.15G002700 Glycine max HOM05D000470 ORTHO05D000348 6.7e-10 67.0 50 66.0
MD17G1224500 Malus domestica HOM05D000470 ORTHO05D000348 6.7e-10 67.0 53 66.0
Sed0019886 Sechium edule HOM05D000470 ORTHO05D000348 8.8e-10 66.6 51 68.6
Prupe.3G100200 Prunus persica HOM05D000470 ORTHO05D000348 1.5e-09 65.9 53 64.2
vmacro16848 Vaccinium macrocarpon HOM05D000470 ORTHO05D000348 1.5e-09 65.9 50 66.0
Aa31LG7G590 Aethionema arabicum HOM05D000470 ORTHO05D000348 2.0e-09 65.5 50 66.0
RcHm_v2.0_Chr2g0132741 Rosa chinensis HOM05D000470 ORTHO05D000348 2.0e-09 65.5 53 66.0
FvH4_6g28490 Fragaria vesca HOM05D000470 ORTHO05D000348 2.5e-09 65.1 53 64.2
FAN02G3900 Fragaria x ananassa HOM05D000470 ORTHO05D000348 2.5e-09 65.1 53 64.2
FAN05G5206 Fragaria x ananassa HOM05D000470 ORTHO05D000348 2.5e-09 65.1 53 64.2
FAN14G5196 Fragaria x ananassa HOM05D000470 ORTHO05D000348 2.5e-09 65.1 53 64.2
Psat5g308400 Pisum sativum HOM05D000470 ORTHO05D000348 2.5e-09 65.1 50 62.0
Rhsim12G0184500 Rhododendron simsii HOM05D000470 ORTHO05D000348 2.5e-09 65.1 50 66.0
Rhsim12G0186700 Rhododendron simsii HOM05D000470 ORTHO05D000348 2.5e-09 65.1 50 66.0
EL10Ac7g17032 Beta vulgaris HOM05D000470 ORTHO05D000348 5.7e-09 63.9 55 56.4
BcaB02g08713 Brassica carinata HOM05D000470 ORTHO05D000348 5.7e-09 63.9 51 62.7
AT1G16010 Arabidopsis thaliana HOM05D000470 ORTHO05D000348 7.4e-09 63.5 51 64.7
Thhalv10018562m.g Eutrema salsugineum HOM05D000470 ORTHO05D000348 7.4e-09 63.5 51 64.7
Sp5g34840 Schrenkiella parvula HOM05D000470 ORTHO05D000348 7.4e-09 63.5 51 64.7
THA.LOC104812417 Tarenaya hassleriana HOM05D000470 ORTHO05D000348 7.4e-09 63.5 50 60.0
Sed0024798 Sechium edule HOM05D000470 ORTHO05D000348 9.7e-09 63.2 51 66.7
Gohir.D09G090700 Gossypium hirsutum HOM05D000470 ORTHO05D000348 1.3e-08 62.8 50 62.0
Gorai.006G106900 Gossypium raimondii HOM05D000470 ORTHO05D000348 1.3e-08 62.8 50 62.0
Sp1g14320 Schrenkiella parvula HOM05D000470 ORTHO05D000348 1.7e-08 62.4 51 62.7
Aa31LG4G1210 Aethionema arabicum HOM05D000470 ORTHO05D000348 2.2e-08 62.0 50 64.0
CARHR073570 Cardamine hirsuta HOM05D000470 ORTHO05D000348 2.2e-08 62.0 51 62.7
AL2G40480 Arabidopsis lyrata HOM05D000470 ORTHO05D000348 2.8e-08 61.6 51 62.7
AT1G80900 Arabidopsis thaliana HOM05D000470 ORTHO05D000348 2.8e-08 61.6 51 62.7
MSTRG.11187 Avicennia marina HOM05D000470 ORTHO05D000348 2.8e-08 61.6 52 57.7
BcaC03g15920 Brassica carinata HOM05D000470 ORTHO05D000348 2.8e-08 61.6 51 62.7
C02p36820 Brassica napus HOM05D000470 ORTHO05D000348 2.8e-08 61.6 51 62.7
BcaB05g25216 Brassica carinata HOM05D000470 ORTHO05D000348 3.7e-08 61.2 51 62.7
Nn8g39920 Nelumbo nucifera HOM05D000470 ORTHO05D000348 3.7e-08 61.2 50 58.0
AL1G28170 Arabidopsis lyrata HOM05D000470 ORTHO05D000348 4.8e-08 60.8 51 60.8
Carub.0001s1581 Capsella rubella HOM05D000470 ORTHO05D000348 4.8e-08 60.8 51 60.8
Gohir.A09G090700 Gossypium hirsutum HOM05D000470 ORTHO05D000348 4.8e-08 60.8 50 60.0
TAR383G0368 Trochodendron aralioides HOM05D000470 ORTHO05D000348 4.8e-08 60.8 50 54.0
CARHR016500 Cardamine hirsuta HOM05D000470 ORTHO05D000348 6.3e-08 60.5 51 60.8
A02p23070 Brassica napus HOM05D000470 ORTHO05D000348 8.2e-08 60.1 52 61.5
BolC2t09693H Brassica oleracea HOM05D000470 ORTHO05D000348 8.2e-08 60.1 52 61.5
BraA02t07305Z Brassica rapa HOM05D000470 ORTHO05D000348 8.2e-08 60.1 52 61.5
Eucgr.F03969 Eucalyptus grandis HOM05D000470 ORTHO05D000348 1.4e-07 59.3 50 56.0
Medtr2g105270 Medicago truncatula HOM05D000470 ORTHO05D000348 1.4e-07 59.3 50 56.0
AUR62006325 Chenopodium quinoa HOM05D000470 ORTHO05D000348 1.8e-07 58.9 50 58.0
AUR62026364 Chenopodium quinoa HOM05D000470 ORTHO05D000348 1.8e-07 58.9 50 58.0
HanXRQChr09g0274461 Helianthus annuus HOM05D000470 ORTHO05D000348 2.4e-07 58.5 50 62.0
Rhsim12G0183700 Rhododendron simsii HOM05D000470 ORTHO05D000348 2.4e-07 58.5 50 60.0
Sc12g0008110 Simmondsia chinensis HOM05D000470 ORTHO05D000348 2.4e-07 58.5 50 56.0
TAR626G1352 Trochodendron aralioides HOM05D000470 ORTHO05D000348 2.4e-07 58.5 50 58.0
Thhalv10007638m.g Eutrema salsugineum HOM05D000470 ORTHO05D000348 3.1e-07 58.2 51 58.8
Aqoxy7G03386 Aquilegia oxysepala HOM05D000470 ORTHO05D000348 5.3e-07 57.4 66 51.5
Ca_01008_v3 Cicer arietinum L. HOM05D000470 ORTHO05D000348 5.3e-07 57.4 50 58.0
Nn2g12406 Nelumbo nucifera HOM05D000470 ORTHO05D000348 5.3e-07 57.4 50 52.0
Lsat_1_v5_gn_5_8301 Lactuca sativa HOM05D000470 ORTHO05D000348 6.9e-07 57.0 50 62.0
BolC6t40377H Brassica oleracea HOM05D000470 ORTHO05D000348 9.1e-07 56.6 51 52.9
BcaC05g25619 Brassica carinata HOM05D000470 ORTHO05D000348 1.2e-06 56.2 51 58.8
C05p14210 Brassica napus HOM05D000470 ORTHO05D000348 1.2e-06 56.2 51 58.8
BolC5t30152H Brassica oleracea HOM05D000470 ORTHO05D000348 1.2e-06 56.2 51 58.8
ECA232G3944 Erigeron canadensis HOM05D000470 ORTHO05D000348 1.2e-06 56.2 50 62.0
A06p12040 Brassica napus HOM05D000470 ORTHO05D000348 1.5e-06 55.8 52 57.7
BraA06t24373Z Brassica rapa HOM05D000470 ORTHO05D000348 1.5e-06 55.8 52 57.7
PGR031G1635 Punica granatum HOM05D000470 ORTHO05D000348 1.5e-06 55.8 51 60.8
Hund06802 Selenicereus undatus HOM05D000470 ORTHO05D000348 1.5e-06 55.8 51 54.9
BcaB02g06651 Brassica carinata HOM05D000470 ORTHO05D000348 2.0e-06 55.5 53 56.6
arahy.Tifrunner.gnm1.ann1.FURL1J Arachis hypogaea HOM05D000470 ORTHO05D000348 2.6e-06 55.1 50 54.0
BcaC08g47536 Brassica carinata HOM05D000470 ORTHO05D000348 2.6e-06 55.1 51 52.9
SHI11313 Sapria himalayana HOM05D000470 ORTHO05D000348 2.6e-06 55.1 50 52.0
ATR0580G299 Amborella trichopoda HOM05D000470 ORTHO05D000348 3.4e-06 54.7 50 54.0
arahy.Tifrunner.gnm1.ann1.UQ7PKN Arachis hypogaea HOM05D000470 ORTHO05D000348 3.4e-06 54.7 50 54.0
DCAR_016306 Daucus carota HOM05D000470 ORTHO05D000348 4.5e-06 54.3 50 60.0
unitig_52.g17465 Utricularia gibba HOM05D000470 ORTHO05D000348 7.7e-06 53.5 50 60.0


User provided reference genes

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