Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 1.1e-80 303.5 193 100.0
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 3.9e-57 225.3 147 82.3
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 3.9e-57 225.3 148 80.4
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.4e-54 216.9 145 76.6
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 9.1e-54 214.2 145 75.2
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 6.5e-52 208.0 145 76.6
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 1.5e-51 206.8 145 75.9
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 1.9e-51 206.5 145 73.8
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.5e-51 206.1 145 75.9
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-51 206.1 146 75.3
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-51 206.1 146 75.3
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 2.5e-51 206.1 146 75.3
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.2e-51 205.3 145 73.1
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 4.2e-51 205.3 147 72.8
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 4.2e-51 205.3 148 73.6
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.5e-51 204.9 145 73.1
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.5e-51 204.9 145 73.1
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 7.2e-51 204.5 146 75.3
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 9.4e-51 204.1 145 73.8
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 1.2e-50 203.8 146 75.3
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.2e-50 203.8 145 73.8
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.6e-50 203.4 144 74.3
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 2.1e-50 203.0 149 73.2
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 2.1e-50 203.0 145 73.8
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 2.7e-50 202.6 135 78.5
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.7e-50 201.8 146 75.3
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 4.7e-50 201.8 149 71.8
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 6.1e-50 201.4 145 71.7
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.0e-49 200.7 145 71.0
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.0e-49 200.7 145 72.4
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 1.0e-49 200.7 145 73.8
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.0e-49 200.7 145 73.1
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 1.4e-49 200.3 145 71.7
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.4e-49 200.3 145 71.7
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 4.0e-49 198.7 146 70.5
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 5.2e-49 198.4 145 71.7
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 8.8e-49 197.6 145 71.0
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 8.8e-49 197.6 149 71.8
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 8.8e-49 197.6 145 73.1
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 2.0e-48 196.4 147 71.4
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 2.6e-48 196.1 145 71.0
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 2.6e-48 196.1 145 72.4
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 4.4e-48 195.3 146 70.5
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 4.4e-48 195.3 145 71.0
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 4.4e-48 195.3 145 69.7
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 5.7e-48 194.9 127 78.7
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 5.7e-48 194.9 146 69.9
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 7.5e-48 194.5 145 72.4
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 7.5e-48 194.5 145 69.0
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 7.5e-48 194.5 146 69.9
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 7.5e-48 194.5 146 69.9
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 7.5e-48 194.5 145 71.7
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 9.7e-48 194.1 146 71.2
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 9.7e-48 194.1 145 68.3
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 9.7e-48 194.1 145 71.7
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 9.7e-48 194.1 145 71.0
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 9.7e-48 194.1 146 69.9
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.7e-47 193.4 135 72.6
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.7e-47 193.4 145 69.7
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 1.7e-47 193.4 145 71.0
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 2.2e-47 193.0 147 72.1
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 2.2e-47 193.0 147 68.7
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 2.8e-47 192.6 145 70.3
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 2.8e-47 192.6 145 72.4
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 2.8e-47 192.6 147 70.1
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 3.7e-47 192.2 147 70.7
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 3.7e-47 192.2 145 69.0
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 3.7e-47 192.2 145 69.0
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 3.7e-47 192.2 145 69.0
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 4.8e-47 191.8 142 71.1
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 4.8e-47 191.8 145 66.9
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 4.8e-47 191.8 145 66.9
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 6.3e-47 191.4 145 69.7
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 6.3e-47 191.4 149 65.8
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 8.3e-47 191.0 147 68.7
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 8.3e-47 191.0 137 70.1
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 8.3e-47 191.0 146 67.8
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 8.3e-47 191.0 145 69.7
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 1.8e-46 189.9 145 68.3
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.8e-46 189.9 145 68.3
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 5.3e-46 188.3 134 69.4
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 5.3e-46 188.3 145 66.2
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 5.3e-46 188.3 145 66.2
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 7.0e-46 188.0 148 66.2
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 7.0e-46 188.0 145 67.6
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.6e-45 186.8 145 68.3
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 2.7e-45 186.0 145 67.6
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.5e-45 185.7 145 70.3
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 3.5e-45 185.7 130 71.5
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 4.5e-45 185.3 145 67.6
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 4.5e-45 185.3 143 66.4
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 7.7e-45 184.5 146 66.4
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 7.7e-45 184.5 145 66.9
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 7.7e-45 184.5 145 65.5
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.0e-44 184.1 147 66.7
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.0e-44 184.1 148 65.5
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 1.0e-44 184.1 145 65.5
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.3e-44 183.7 147 65.3
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 2.2e-44 183.0 145 64.8
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.2e-44 183.0 148 65.5
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 3.8e-44 182.2 145 62.1
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 3.8e-44 182.2 137 67.9
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.8e-44 182.2 145 67.6
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 3.8e-44 182.2 134 72.4
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 5.0e-44 181.8 139 66.2
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 5.0e-44 181.8 147 65.3
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 6.5e-44 181.4 147 64.6
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 6.5e-44 181.4 139 66.2
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 8.5e-44 181.0 148 64.9
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 8.5e-44 181.0 145 63.4
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 8.5e-44 181.0 128 71.1
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.1e-43 180.6 144 63.9
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.1e-43 180.6 144 63.9
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.1e-43 180.6 144 63.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 1.1e-43 180.6 148 64.2
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 1.5e-43 180.3 131 68.7
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 1.9e-43 179.9 148 63.5
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 2.5e-43 179.5 125 72.8
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 2.5e-43 179.5 140 66.4
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 3.2e-43 179.1 148 64.2
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 4.2e-43 178.7 132 71.2
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 4.2e-43 178.7 148 63.5
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 4.2e-43 178.7 148 63.5
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 4.2e-43 178.7 145 68.3
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 5.5e-43 178.3 148 62.8
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 5.5e-43 178.3 148 63.5
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 7.2e-43 177.9 149 63.8
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 7.2e-43 177.9 144 62.5
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 9.4e-43 177.6 145 62.8
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 9.4e-43 177.6 129 65.9
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 9.4e-43 177.6 147 63.9
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 1.2e-42 177.2 144 61.8
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 1.2e-42 177.2 140 64.3
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.1e-42 176.4 145 60.0
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 1.0e-41 174.1 124 66.9
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 1.0e-41 174.1 124 66.9
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.0e-41 174.1 132 71.2
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 2.3e-41 172.9 126 67.5
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 4.0e-41 172.2 153 64.7
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 5.7e-40 168.3 136 65.4
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 1.8e-38 163.3 142 63.4
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 5.4e-38 161.8 133 61.7
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 2.0e-37 159.8 141 62.4
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 5.9e-37 158.3 145 56.6
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 7.7e-37 157.9 92 81.5
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 9.5e-35 151.0 145 51.0
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 4.7e-34 148.7 140 50.7
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.4e-32 142.5 129 57.4
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 7.0e-30 134.8 145 49.7
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 2.5e-27 126.3 78 74.4
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 4.3e-27 125.6 133 47.4
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.0e-25 120.9 85 75.3
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 5.2e-25 118.6 91 71.4
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 7.8e-21 104.8 90 64.4
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.3e-20 104.0 87 66.7
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 3.3e-19 99.4 87 63.2
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 4.3e-19 99.0 89 58.4
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.1e-18 96.7 60 80.0
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 2.8e-18 96.3 92 55.4
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 2.0e-16 90.1 56 73.2
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 2.1e-13 80.1 50 78.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 2.6e-08 63.2 68 48.5
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 2.2e-07 60.1 39 71.8
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 1.1e-06 57.8 89 32.6


User provided reference genes

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