Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0145500 Salix brachista HOM05D000537 ORTHO05D349698 6.5e-158 560.8 315 100.0
Potri.001G240666 Populus trichocarpa HOM05D000537 ORTHO05D000415 5.0e-33 146.0 194 51.0
Potri.010G184800 Populus trichocarpa HOM05D000537 ORTHO05D000415 8.0e-15 85.5 106 54.7
Sabra10G0142100 Salix brachista HOM05D000537 ORTHO05D000415 6.3e-12 75.9 81 56.8
Duzib150G0788 Durio zibethinus HOM05D000537 ORTHO05D000415 1.2e-10 71.6 78 51.3
COL.COLO4_18521 Corchorus olitorius HOM05D000537 ORTHO05D000415 1.0e-09 68.6 104 44.2
Eucgr.B02356 Eucalyptus grandis HOM05D000537 ORTHO05D000415 1.0e-09 68.6 77 49.4
Nn5g30083 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-09 67.8 65 49.2
Nn5g28050 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.2e-09 67.4 65 49.2
CSS0012115 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-09 65.9 124 31.5
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.9e-08 64.3 111 36.0
Gohir.A13G227232 Gossypium hirsutum HOM05D000537 ORTHO05D000415 4.2e-08 63.2 81 45.7
Actinidia07031 Actinidia chinensis HOM05D000537 ORTHO05D000415 7.2e-08 62.4 78 51.3
Gohir.D13G232600 Gossypium hirsutum HOM05D000537 ORTHO05D000415 7.2e-08 62.4 79 45.6
Gorai.013G263400 Gossypium raimondii HOM05D000537 ORTHO05D000415 1.2e-07 61.6 79 45.6
Medtr4g046643 Medicago truncatula HOM05D000537 ORTHO05D000415 1.6e-07 61.2 82 45.1
SHI17169 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 61.2 43 60.5
Haze_08853 Corylus avellana HOM05D000537 ORTHO05D000415 3.6e-07 60.1 102 42.2
PGR102G0388 Punica granatum HOM05D000537 ORTHO05D000415 4.7e-07 59.7 82 45.1
SHI16108 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 59.7 43 58.1
TPR.G34301 Trifolium pratense HOM05D000537 ORTHO05D000415 4.7e-07 59.7 77 44.2
FvH4_4g30271 Fragaria vesca HOM05D000002 ORTHO05D000001 6.1e-07 59.3 51 52.9
Thecc.09G320400 Theobroma cacao HOM05D000537 ORTHO05D000415 6.1e-07 59.3 103 39.8
Dinv17011 Davidia involucrata HOM05D000537 ORTHO05D000415 1.0e-06 58.5 78 46.2
Dinv42960 Davidia involucrata HOM05D000537 ORTHO05D000415 1.0e-06 58.5 78 46.2
Dinv43139 Davidia involucrata HOM05D000537 ORTHO05D000415 1.0e-06 58.5 78 46.2
CSS0003706 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 57.8 91 29.7
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 1.8e-06 57.8 84 40.5
CsaV3_1G034300 Cucumis sativus L. HOM05D000046 ORTHO05D000195 3.0e-06 57.0 106 41.5
TPR.G10086 Trifolium pratense HOM05D000002 ORTHO05D000001 4.0e-06 56.6 112 33.0
CSS0024117 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 56.2 102 40.2
CSS0036158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-06 56.2 76 35.5
Glyma.13G336500 Glycine max HOM05D000537 ORTHO05D000415 5.2e-06 56.2 77 45.5
Lj6g0001534 Lotus japonicus HOM05D000537 ORTHO05D000415 5.2e-06 56.2 94 44.7
TWI75G1439 Tripterygium wilfordii HOM05D000537 ORTHO05D000415 5.2e-06 56.2 79 44.3
CSS0036055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.8e-06 55.8 123 30.9
MELO3C020627.2 Cucumis melo HOM05D000537 ORTHO05D000415 6.8e-06 55.8 106 40.6
ECA238G1036 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-06 55.5 78 41.0
Medtr4g126180 Medicago truncatula HOM05D000537 ORTHO05D048843 8.8e-06 55.5 95 36.8
TPR.G10372 Trifolium pratense HOM05D000002 ORTHO05D000001 8.8e-06 55.5 54 46.3


User provided reference genes

Program Settings