Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 8.8e-90 333.6 165 100.0
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.8e-69 265.0 170 84.1
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 5.2e-58 228.0 172 73.8
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 9.2e-39 164.1 185 54.1
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 8.6e-37 157.5 173 57.2
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.1e-34 150.6 172 53.5
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.4e-33 145.2 178 46.1
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 2.3e-29 132.9 178 47.8
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 6.2e-27 124.8 181 43.6
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 2.4e-23 112.8 146 47.3
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.2e-23 112.5 176 41.5
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.2e-23 112.1 167 46.1
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 9.3e-23 110.9 178 44.9
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 6.0e-22 108.2 163 46.0
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.3e-21 107.1 169 42.6
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 1.3e-21 107.1 168 43.5
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.3e-21 107.1 171 48.5
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.3e-21 107.1 171 48.5
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.3e-21 107.1 171 48.5
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.8e-21 106.7 95 58.9
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.3e-21 106.3 168 39.9
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.0e-21 105.9 167 43.7
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 3.0e-21 105.9 177 42.4
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.9e-21 105.5 167 43.7
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 1.9e-20 103.2 181 39.2
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.1e-19 99.8 175 41.1
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 3.6e-19 99.0 187 41.7
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 3.1e-18 95.9 170 44.7
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 4.0e-18 95.5 155 47.1
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 5.3e-18 95.1 158 45.6
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 6.9e-18 94.7 95 56.8
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.5e-17 93.6 174 37.4
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.4e-17 92.4 87 59.8
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.5e-17 92.0 82 63.4
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 4.5e-17 92.0 169 37.9
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 1.3e-16 90.5 131 48.1
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 1.3e-16 90.5 129 48.8
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.3e-16 90.5 173 39.3
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.7e-16 90.1 171 39.8
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 1.7e-16 90.1 159 40.3
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.9e-16 89.4 157 41.4
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.9e-16 88.6 131 47.3
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 6.4e-16 88.2 107 51.4
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 6.4e-16 88.2 158 40.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-15 87.4 96 54.2
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.9e-15 86.7 140 40.7
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.4e-15 86.3 179 39.1
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.2e-15 85.5 131 45.8
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 7.1e-15 84.7 139 45.3
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 7.1e-15 84.7 128 40.6
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 7.1e-15 84.7 136 39.0
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 1.2e-14 84.0 105 51.4
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 2.1e-14 83.2 141 37.6
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 2.7e-14 82.8 102 51.0
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.0e-14 81.6 195 34.9
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 1.0e-13 80.9 99 45.5
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.8e-13 80.1 171 36.3
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 2.3e-13 79.7 136 37.5
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 1.9e-12 76.6 145 38.6
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 2.5e-12 76.3 145 37.9
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 3.3e-12 75.9 92 47.8
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 3.3e-12 75.9 123 43.9
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 4.3e-12 75.5 92 52.2
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 9.6e-12 74.3 83 51.8
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 1.3e-11 73.9 93 50.5
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 2.1e-11 73.2 87 51.7
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.8e-11 72.8 131 35.9
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 4.8e-11 72.0 147 34.7
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 6.2e-11 71.6 147 37.4
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.1e-10 70.9 91 44.0
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 1.4e-10 70.5 68 52.9
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 1.4e-10 70.5 141 34.0
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 1.8e-10 70.1 125 38.4
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 2.4e-10 69.7 67 58.2
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 4.0e-10 68.9 96 44.8
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 5.3e-10 68.6 173 37.6
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 9.0e-10 67.8 126 40.5
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 2.6e-09 66.2 99 39.4
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 5.8e-09 65.1 180 32.8
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.8e-09 65.1 96 43.8
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.0e-08 64.3 86 40.7
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 2.9e-08 62.8 79 48.1
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.9e-08 62.8 99 41.4
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 2.9e-08 62.8 141 34.0
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 2.9e-08 62.8 135 31.1
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 3.8e-08 62.4 135 35.6
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.8e-08 62.4 168 31.5
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.8e-08 62.4 168 31.5
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 4.9e-08 62.0 99 47.5
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 4.9e-08 62.0 82 47.6
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 6.5e-08 61.6 119 39.5
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 8.4e-08 61.2 74 43.2
Rhsim01G0227100 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.1e-07 60.8 119 39.5
Lsat_1_v5_gn_9_23241 Lactuca sativa HOM05D030279 ORTHO05D029282 1.9e-07 60.1 156 30.8
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.5e-07 59.7 75 48.0
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 3.2e-07 59.3 90 45.6
Solyc11g066000.1 Solanum lycopersicum HOM05D030065 ORTHO05D005174 3.2e-07 59.3 84 42.9
PGSC0003DMG400000470 Solanum tuberosum HOM05D030065 ORTHO05D005174 3.2e-07 59.3 77 45.5
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 4.2e-07 58.9 101 36.6
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 5.5e-07 58.5 120 38.3
Sopen11g025730 Solanum pennellii HOM05D030065 ORTHO05D005174 1.2e-06 57.4 60 50.0
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 1.6e-06 57.0 78 41.0
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 2.1e-06 56.6 107 41.1
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 2.7e-06 56.2 148 37.2
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 6.0e-06 55.1 89 40.4
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 6.0e-06 55.1 83 41.0


User provided reference genes

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