Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 8.5e-117 424.1 284 100.0
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 5.8e-73 278.5 143 92.3
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 2.7e-62 243.0 142 81.0
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.3e-59 234.2 143 79.7
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.4e-58 229.9 142 79.6
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 2.4e-58 229.9 142 79.6
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 4.0e-58 229.2 143 79.0
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 6.9e-58 228.4 138 78.3
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 1.2e-57 227.6 138 78.3
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 3.4e-57 226.1 142 77.5
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 4.4e-57 225.7 138 77.5
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 5.8e-57 225.3 143 78.3
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 7.6e-57 224.9 143 76.2
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.3e-56 224.2 135 80.0
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.7e-56 223.8 140 75.0
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.7e-56 223.8 138 76.8
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 3.8e-56 222.6 143 77.6
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 3.8e-56 222.6 143 76.2
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 3.8e-56 222.6 137 78.8
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 4.9e-56 222.2 144 76.4
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 6.4e-56 221.9 137 75.2
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 6.4e-56 221.9 143 74.1
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.4e-55 220.7 138 78.3
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.4e-55 220.7 138 78.3
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.4e-55 219.9 138 74.6
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 3.2e-55 219.5 142 76.8
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 4.2e-55 219.2 138 77.5
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 4.2e-55 219.2 140 77.1
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 4.2e-55 219.2 135 76.3
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 5.4e-55 218.8 143 75.5
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 7.1e-55 218.4 137 78.1
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 7.1e-55 218.4 137 78.1
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 9.3e-55 218.0 136 77.2
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 9.3e-55 218.0 136 77.2
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 9.3e-55 218.0 136 77.2
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 9.3e-55 218.0 136 77.2
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.2e-54 217.6 136 77.2
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 1.2e-54 217.6 136 77.2
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 1.2e-54 217.6 135 76.3
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 1.6e-54 217.2 135 76.3
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 1.6e-54 217.2 137 77.4
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 1.6e-54 217.2 137 77.4
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 1.6e-54 217.2 136 75.7
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 2.1e-54 216.9 136 76.5
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 2.1e-54 216.9 144 72.9
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 3.5e-54 216.1 138 73.2
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 4.6e-54 215.7 136 75.7
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 4.6e-54 215.7 138 76.8
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 6.0e-54 215.3 135 75.6
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 6.0e-54 215.3 138 72.5
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 6.0e-54 215.3 134 76.9
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 7.9e-54 214.9 136 76.5
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 7.9e-54 214.9 134 77.6
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 1.0e-53 214.5 135 76.3
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.3e-53 214.2 135 74.1
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.7e-53 213.8 144 72.9
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 2.3e-53 213.4 138 72.5
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 3.0e-53 213.0 135 77.0
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 3.0e-53 213.0 136 75.7
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 3.0e-53 213.0 136 73.5
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 3.0e-53 213.0 138 71.7
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 3.0e-53 213.0 136 75.0
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 3.9e-53 212.6 136 74.3
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 5.1e-53 212.2 138 74.6
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 8.7e-53 211.5 135 72.6
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 1.1e-52 211.1 138 71.7
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 1.5e-52 210.7 133 72.9
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 1.5e-52 210.7 135 73.3
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 3.3e-52 209.5 137 75.9
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 3.3e-52 209.5 144 69.4
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 5.6e-52 208.8 138 73.2
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 9.6e-52 208.0 139 71.2
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 9.6e-52 208.0 134 73.9
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 9.6e-52 208.0 135 72.6
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 9.6e-52 208.0 138 71.7
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.6e-51 207.2 138 71.7
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.6e-51 207.2 135 74.8
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 2.1e-51 206.8 135 74.8
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.8e-51 206.5 144 70.1
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 3.6e-51 206.1 135 74.1
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.8e-51 205.7 144 70.1
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 4.8e-51 205.7 135 74.1
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 6.2e-51 205.3 128 77.3
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 8.1e-51 204.9 135 74.8
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 1.4e-50 204.1 135 73.3
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 3.1e-50 203.0 142 69.7
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.2e-49 201.1 129 74.4
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 5.8e-49 198.7 135 71.9
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 5.8e-49 198.7 130 70.0
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 7.6e-49 198.4 136 70.6
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 7.6e-49 198.4 144 67.4
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.9e-47 193.7 139 66.2
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 5.5e-47 192.2 143 71.3
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 3.9e-45 186.0 131 69.5
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.1e-42 177.9 130 65.4
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 7.6e-41 171.8 113 73.5
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.1e-39 167.9 154 59.1
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.2e-39 166.0 142 62.0
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 5.5e-39 165.6 164 56.7
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 7.1e-39 165.2 128 62.5
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.2e-38 164.5 94 79.8
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 2.1e-38 163.7 97 77.3
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 7.9e-38 161.8 132 56.8
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 8.7e-37 158.3 101 74.3
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 3.7e-35 152.9 138 62.3
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 3.1e-34 149.8 96 75.0
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 5.3e-34 149.1 141 56.0
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 4.5e-33 146.0 103 71.8
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 1.3e-32 144.4 135 56.3
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 2.9e-32 143.3 100 67.0
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.5e-31 140.2 138 59.4
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 3.9e-29 132.9 97 62.9
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 8.5e-24 115.2 96 60.4
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 2.7e-22 110.2 132 45.5
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 8.8e-21 105.1 95 53.7
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 5.7e-20 102.4 135 43.7
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 5.7e-20 102.4 130 41.5
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 2.8e-19 100.1 117 43.6
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.8e-18 97.4 63 73.0
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 5.3e-18 95.9 138 43.5
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 4.5e-17 92.8 63 68.3
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 1.9e-15 87.4 60 68.3
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 1.5e-12 77.8 47 78.7
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 2.2e-11 73.9 44 77.3
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 4.5e-09 66.2 37 75.7
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.9e-07 60.8 35 77.1
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 2.5e-07 60.5 39 74.4
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 4.7e-06 56.2 129 33.3


User provided reference genes

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