Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 5.0e-177 624.4 329 100.0
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 2.2e-47 193.7 167 70.1
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 3.0e-41 173.3 173 61.8
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 5.7e-40 169.1 167 61.1
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.3e-39 167.9 166 61.4
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.7e-39 166.4 168 61.3
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 8.3e-39 165.2 174 57.5
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.4e-38 164.5 167 60.5
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 4.1e-38 162.9 165 59.4
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 5.4e-38 162.5 164 60.4
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 2.0e-37 160.6 170 57.6
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 2.0e-37 160.6 166 57.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 3.5e-37 159.8 167 58.1
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 4.5e-37 159.5 168 56.0
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 4.5e-37 159.5 168 56.0
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 5.9e-37 159.1 179 55.9
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 5.9e-37 159.1 167 56.3
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 5.9e-37 159.1 172 57.0
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 5.9e-37 159.1 162 59.3
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 7.7e-37 158.7 166 56.0
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.0e-36 158.3 167 56.9
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 1.3e-36 157.9 165 59.4
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 2.3e-36 157.1 166 59.0
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 2.3e-36 157.1 176 53.4
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.8e-36 156.4 110 78.2
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 3.8e-36 156.4 165 58.8
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 3.8e-36 156.4 165 58.8
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 6.6e-36 155.6 167 56.3
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 8.6e-36 155.2 164 57.3
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 8.6e-36 155.2 167 56.9
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.5e-35 153.7 109 78.0
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 2.5e-35 153.7 179 54.2
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.3e-35 153.3 110 75.5
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 4.2e-35 152.9 111 76.6
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 5.5e-35 152.5 165 57.6
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 5.5e-35 152.5 167 54.5
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 5.5e-35 152.5 165 56.4
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 7.2e-35 152.1 99 80.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 9.5e-35 151.8 169 55.0
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 9.5e-35 151.8 147 60.5
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 9.5e-35 151.8 167 55.7
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 9.5e-35 151.8 114 74.6
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.2e-34 151.4 99 80.8
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.2e-34 151.4 95 83.2
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.2e-34 151.4 117 73.5
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.2e-34 151.4 157 59.2
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.6e-34 151.0 99 77.8
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.6e-34 151.0 108 77.8
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.6e-34 151.0 165 57.0
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 2.1e-34 150.6 167 53.9
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 2.8e-34 150.2 111 75.7
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 4.7e-34 149.4 166 54.8
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 4.7e-34 149.4 219 45.7
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 4.7e-34 149.4 134 65.7
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 6.1e-34 149.1 167 53.3
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.0e-33 148.3 168 53.0
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.4e-33 147.9 111 74.8
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 2.3e-33 147.1 109 76.1
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 2.3e-33 147.1 109 76.1
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 3.0e-33 146.7 109 76.1
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 3.0e-33 146.7 109 76.1
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 3.0e-33 146.7 109 76.1
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 3.0e-33 146.7 170 52.9
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 6.8e-33 145.6 111 73.0
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.5e-32 144.4 111 73.0
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.5e-32 144.4 98 78.6
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.6e-32 143.7 164 53.7
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 3.4e-32 143.3 178 50.0
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 4.4e-32 142.9 111 73.0
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 4.4e-32 142.9 178 49.4
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 7.5e-32 142.1 114 67.5
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 9.8e-32 141.7 110 68.2
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 9.8e-32 141.7 110 68.2
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 1.3e-31 141.4 110 69.1
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 2.2e-31 140.6 114 66.7
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 2.8e-31 140.2 98 78.6
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 4.9e-31 139.4 98 74.5
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 6.3e-31 139.0 200 43.5
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 5.4e-30 136.0 108 69.4
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 5.4e-30 136.0 99 70.7
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 5.4e-30 136.0 99 70.7
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 5.4e-30 136.0 114 65.8
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.6e-29 134.4 107 71.0
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 5.9e-29 132.5 94 72.3
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 5.9e-29 132.5 173 48.0
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 5.9e-29 132.5 98 71.4
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 1.3e-28 131.3 105 71.4
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.9e-27 127.5 103 66.0
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 2.8e-26 123.6 163 54.6
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 3.1e-25 120.2 113 60.2
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 6.8e-25 119.0 98 65.3
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.2e-24 118.2 125 60.0
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 3.4e-24 116.7 108 59.3
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 3.4e-24 116.7 105 62.9
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.9e-23 113.6 98 65.3
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 3.7e-23 113.2 109 61.5
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.4e-22 111.3 115 58.3
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.4e-22 111.3 97 63.9
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.5e-19 100.5 99 56.6
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 3.3e-19 100.1 61 82.0
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 7.3e-19 99.0 136 47.8
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 8.9e-17 92.0 61 75.4
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 8.9e-17 92.0 112 49.1
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 4.4e-16 89.7 91 59.3
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 2.4e-14 84.0 92 51.1
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 9.2e-14 82.0 123 41.5
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 1.0e-12 78.6 51 82.4
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 1.2e-08 65.1 52 67.3
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 2.9e-07 60.5 38 76.3


User provided reference genes

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