Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 6.6e-210 733.8 374 100.0
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.8e-200 701.8 374 95.5
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.4e-164 583.2 386 79.3
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 5.0e-157 558.1 378 78.3
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 5.5e-156 554.7 373 76.4
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 9.4e-156 553.9 378 77.2
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 2.6e-153 545.8 378 75.7
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 7.4e-153 544.3 378 75.7
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 9.7e-153 543.9 379 75.2
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.7e-152 543.1 383 74.7
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 2.2e-152 542.7 378 76.2
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 6.3e-152 541.2 375 75.5
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 1.8e-151 539.7 379 75.7
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 3.1e-151 538.9 349 79.9
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 5.3e-151 538.1 375 75.2
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 2.6e-150 535.8 387 72.4
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 3.5e-150 535.4 349 79.4
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 2.9e-149 532.3 382 74.3
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 3.8e-149 531.9 378 74.3
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 6.5e-149 531.2 377 74.0
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.5e-149 531.2 380 73.7
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.1e-148 530.4 380 75.3
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 2.5e-148 529.3 389 72.5
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 4.2e-148 528.5 376 74.5
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 1.2e-147 526.9 381 74.8
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.6e-147 526.6 376 72.9
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.6e-147 526.6 375 72.5
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.6e-147 526.6 375 72.5
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 2.1e-147 526.2 380 73.4
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 8.0e-147 524.2 377 74.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.0e-146 523.9 378 74.1
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.0e-146 523.9 378 74.1
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.4e-146 523.5 374 72.5
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.8e-146 523.1 384 72.7
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 2.3e-146 522.7 379 73.6
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 2.3e-146 522.7 379 73.6
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 2.3e-146 522.7 344 77.9
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 5.2e-146 521.5 378 73.5
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.7e-146 521.2 380 73.2
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 6.7e-146 521.2 334 79.0
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.2e-145 520.4 383 72.6
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 2.0e-145 519.6 383 73.1
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 2.6e-145 519.2 374 72.5
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 7.5e-145 517.7 343 78.1
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 7.5e-145 517.7 379 73.4
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 7.5e-145 517.7 378 72.0
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 9.7e-145 517.3 372 72.0
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 9.7e-145 517.3 373 74.8
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.7e-144 516.5 373 72.4
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.2e-144 516.2 363 73.8
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 3.7e-144 515.4 375 72.3
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 1.8e-143 513.1 373 72.1
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 4.1e-143 511.9 381 72.4
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 5.3e-143 511.5 380 72.6
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 5.3e-143 511.5 364 74.2
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 5.3e-143 511.5 375 71.5
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 1.2e-142 510.4 332 78.3
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 5.9e-142 508.1 376 72.1
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.3e-141 506.9 372 73.4
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 2.9e-141 505.8 380 71.3
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 3.8e-141 505.4 337 77.4
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 5.0e-141 505.0 377 72.1
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 5.0e-141 505.0 382 69.6
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 6.5e-141 504.6 338 77.8
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 5.5e-140 501.5 377 71.1
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 5.5e-140 501.5 371 72.0
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 7.2e-140 501.1 325 80.9
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.2e-139 500.4 384 71.9
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.6e-139 500.0 338 78.4
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.1e-139 499.6 363 73.3
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 6.1e-139 498.0 386 70.7
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 1.4e-138 496.9 339 77.3
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 1.8e-138 496.5 381 71.4
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 3.0e-138 495.7 373 70.0
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 4.0e-138 495.4 342 76.6
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 5.2e-138 495.0 372 69.9
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 8.8e-138 494.2 372 70.4
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.5e-137 493.4 363 72.7
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.6e-137 492.7 401 69.1
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 3.4e-137 492.3 361 72.6
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 5.7e-137 491.5 374 70.9
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 1.7e-136 490.0 369 70.2
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 2.0e-134 483.0 377 69.2
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 6.6e-133 478.0 342 73.7
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.5e-132 476.9 343 73.8
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 4.2e-132 475.3 357 72.0
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 7.2e-132 474.6 337 73.6
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 3.6e-131 472.2 344 73.0
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 3.6e-131 472.2 377 66.6
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 8.0e-131 471.1 278 86.0
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.4e-130 470.3 349 70.2
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.8e-130 469.9 331 74.9
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 2.3e-130 469.5 378 66.9
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 4.0e-130 468.8 341 72.7
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.2e-129 467.2 363 70.2
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.5e-129 466.8 331 74.6
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 5.7e-129 464.9 346 70.5
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 3.5e-126 455.7 326 73.6
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 5.2e-122 441.8 380 64.7
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 4.4e-121 438.7 338 70.4
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 9.8e-121 437.6 356 67.4
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 4.0e-114 415.6 335 67.5
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.3e-112 410.6 302 71.2
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 7.0e-111 404.8 300 69.0
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.0e-109 401.0 288 71.2
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.2e-107 394.0 326 65.6
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.4e-103 380.6 235 82.6
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 1.6e-102 377.1 286 65.7
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 2.5e-92 343.2 277 65.0
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 7.3e-92 341.7 310 58.4
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 1.1e-90 337.8 206 83.5
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 5.6e-84 315.5 301 56.8
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.8e-82 310.5 249 61.0
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 8.4e-80 301.6 256 66.4
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.6e-78 297.4 235 68.9
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 1.0e-77 294.7 281 57.7
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 3.0e-77 293.1 254 58.7
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 3.0e-69 266.5 190 70.5
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 1.9e-68 263.8 212 66.5
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 1.9e-60 237.3 160 77.5
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 3.0e-53 213.4 234 53.4
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 6.3e-51 205.7 192 59.9
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.4e-50 204.5 125 80.8
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 5.3e-50 202.6 158 67.1
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 9.1e-50 201.8 188 59.6
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 2.2e-48 197.2 188 59.0
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 1.9e-47 194.1 109 89.0
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 9.4e-47 191.8 137 75.2
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.5e-36 157.9 114 71.9
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.9e-31 141.0 316 33.9
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 1.8e-29 134.4 253 35.2
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.6e-25 121.3 156 47.4
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 5.0e-24 116.3 181 45.3
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 8.5e-24 115.5 167 40.1
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 9.4e-23 112.1 241 31.5
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.6e-20 104.0 79 65.8
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.4e-18 98.2 66 77.3
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 1.8e-18 97.8 50 94.0
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 5.9e-17 92.8 112 52.7
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 9.5e-15 85.5 84 52.4


User provided reference genes

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