Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 4.5e-155 551.2 279 100.0
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 9.8e-142 506.9 269 94.1
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 4.9e-109 398.3 271 71.6
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 3.9e-106 388.7 272 70.2
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 8.7e-106 387.5 272 70.2
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 9.6e-105 384.0 270 68.9
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 2.1e-104 382.9 272 69.1
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 3.6e-104 382.1 272 68.8
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 3.1e-103 379.0 273 69.2
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 9.0e-103 377.5 272 67.6
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 1.3e-101 373.6 271 66.8
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 6.4e-101 371.3 272 66.2
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 8.4e-101 370.9 273 66.3
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 1.1e-100 370.5 272 65.1
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 1.9e-100 369.8 272 64.3
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 1.9e-100 369.8 273 65.6
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 2.4e-100 369.4 272 66.9
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 4.2e-100 368.6 269 64.7
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 4.2e-100 368.6 269 67.7
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 5.5e-100 368.2 272 65.4
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 1.6e-99 366.7 271 64.9
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 4.6e-99 365.2 271 67.2
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 1.3e-98 363.6 272 66.5
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 3.0e-98 362.5 272 65.8
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 3.9e-98 362.1 274 66.1
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 8.7e-98 360.9 268 67.5
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 8.7e-98 360.9 272 64.7
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 1.5e-97 360.1 272 65.4
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 1.5e-97 360.1 271 64.6
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.5e-97 360.1 271 64.6
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 1.5e-97 360.1 272 64.7
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 3.3e-97 359.0 271 64.6
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 4.3e-97 358.6 272 64.3
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 9.6e-97 357.5 268 66.8
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 9.6e-97 357.5 271 65.3
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.8e-96 355.9 271 63.8
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 1.4e-95 353.6 325 56.6
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 1.5e-94 350.1 273 64.1
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 2.0e-94 349.7 272 63.6
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 5.8e-94 348.2 272 63.6
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 1.0e-93 347.4 272 61.8
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 1.0e-93 347.4 272 62.1
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.0e-93 347.4 281 61.2
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 1.7e-93 346.7 270 61.9
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 1.7e-93 346.7 269 62.8
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 2.9e-93 345.9 273 61.2
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 3.8e-93 345.5 272 61.4
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 6.5e-93 344.7 273 61.9
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 8.4e-93 344.4 273 60.8
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 1.1e-92 344.0 272 62.9
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 1.4e-92 343.6 272 61.8
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 5.5e-92 341.7 273 61.5
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 1.2e-91 340.5 273 61.5
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 1.6e-91 340.1 272 64.3
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 1.3e-90 337.0 276 58.7
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 1.3e-90 337.0 272 60.3
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 3.9e-90 335.5 269 59.9
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 3.9e-90 335.5 273 61.2
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 5.1e-90 335.1 272 60.7
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 8.7e-90 334.3 269 59.5
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 1.1e-89 334.0 272 59.2
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 1.9e-89 333.2 270 61.1
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 2.1e-88 329.7 271 60.5
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 3.7e-88 328.9 272 58.5
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 4.8e-88 328.6 276 59.4
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 1.4e-87 327.0 263 63.5
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 1.3e-85 320.5 270 60.4
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 6.5e-85 318.2 268 60.1
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 1.2e-83 313.9 272 59.9
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 2.7e-83 312.8 271 57.2
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 6.1e-83 311.6 268 56.3
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 1.3e-82 310.5 268 57.1
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 1.3e-82 310.5 268 56.7
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 3.9e-82 308.9 268 56.7
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 6.7e-82 308.1 268 57.1
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 1.1e-81 307.4 274 55.5
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 9.7e-81 304.3 270 56.3
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 1.6e-80 303.5 275 54.2
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 2.2e-80 303.1 268 57.5
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 8.2e-80 301.2 269 54.3
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 1.1e-79 300.8 301 53.8
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 1.1e-79 300.8 272 57.7
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.4e-79 300.4 269 54.6
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 2.4e-79 299.7 269 55.0
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 2.4e-79 299.7 269 55.0
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 2.4e-79 299.7 319 50.2
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 3.1e-79 299.3 269 54.6
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.4e-76 290.4 267 55.1
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 4.1e-71 272.3 260 55.0
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 3.4e-70 269.2 272 51.1
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 5.9e-70 268.5 269 52.0
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.9e-68 263.5 276 51.1
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 2.7e-67 259.6 263 48.7
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 7.0e-63 245.0 268 44.4
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 5.3e-55 218.8 163 64.4
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 4.5e-54 215.7 269 44.2
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 5.9e-54 215.3 266 42.9
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 1.5e-52 210.7 177 62.1
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 2.1e-51 206.8 260 41.9
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 1.0e-42 177.9 166 56.6
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 2.7e-38 163.3 268 34.0
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 1.5e-36 157.5 135 60.0
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 9.5e-28 128.3 115 55.7
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 4.7e-27 125.9 167 43.1
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 2.3e-26 123.6 79 69.6
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 1.2e-19 101.3 124 48.4
CBR_g51824 Chara braunii HOM05D005972 ORTHO05D007548 2.3e-18 97.1 124 41.9
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 5.2e-18 95.9 104 43.3
COL.COLO4_10012 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.3e-16 91.3 73 65.8
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 4.6e-14 82.8 83 53.0
CSS0030864 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 1.7e-13 80.9 110 46.4
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 4.0e-10 69.7 90 41.1
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 4.0e-10 69.7 90 41.1
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 5.2e-10 69.3 64 53.1
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 8.9e-10 68.6 47 53.2
A05p16910 Brassica napus HOM05D005972 ORTHO05D007548 3.4e-09 66.6 54 59.3
Zm00001eb076720 Zea mays HOM05D005972 ORTHO05D007548 9.9e-09 65.1 62 54.8
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 3.8e-08 63.2 38 57.9
Ca_20384_v3 Cicer arietinum L. HOM05D001142 ORTHO05D004628 8.4e-08 62.0 276 25.7
Medtr4g012850 Medicago truncatula HOM05D001142 ORTHO05D004628 8.4e-08 62.0 283 26.1
Cpa.g.c40727 Carica papaya HOM05D005972 ORTHO05D007548 4.1e-07 59.7 47 61.7
COL.COLO4_29892 Corchorus olitorius HOM05D005972 ORTHO05D007548 4.6e-06 56.2 52 57.7
Ah.01g021440 Amaranthus hybridus HOM05D001142 ORTHO05D004628 7.8e-06 55.5 114 37.7
DCAR_016218 Daucus carota HOM05D001142 ORTHO05D004628 7.8e-06 55.5 137 35.0
Glyma.05G157800 Glycine max HOM05D000406 ORTHO05D003425 7.8e-06 55.5 151 31.8


User provided reference genes

Program Settings