Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 0.0e+00 1135.2 544 100.0
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 2.9e-299 1031.2 544 90.4
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.3e-235 819.7 537 72.3
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 6.6e-235 817.4 540 72.8
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.1e-233 812.4 546 71.8
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 4.7e-233 811.2 546 71.6
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.4e-232 809.7 540 71.3
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 3.1e-232 808.5 546 71.4
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.5e-231 806.2 546 71.4
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 3.4e-231 805.1 531 71.4
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-230 802.7 540 71.3
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 3.8e-230 801.6 545 69.4
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.1e-229 800.0 540 71.3
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-229 800.0 540 71.5
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.4e-229 799.7 544 69.9
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-229 798.5 540 71.1
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-229 798.5 540 71.1
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 2.1e-228 795.8 543 72.0
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 2.7e-228 795.4 547 70.2
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.6e-228 794.7 540 70.7
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.0e-227 793.5 534 70.4
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 3.0e-227 792.0 542 69.9
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 3.9e-227 791.6 535 70.8
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-226 789.6 552 69.7
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.5e-226 789.6 534 70.8
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 1.9e-226 789.3 538 71.2
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 2.5e-226 788.9 542 69.9
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 4.3e-226 788.1 521 71.8
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 5.6e-226 787.7 540 70.4
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 7.3e-226 787.3 543 70.5
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 4.8e-225 784.6 544 68.9
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.0e-223 779.2 540 69.6
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 5.8e-223 777.7 546 68.7
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 9.9e-223 776.9 547 68.0
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.7e-222 776.2 544 69.3
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 3.8e-222 775.0 540 68.9
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 4.9e-222 774.6 543 68.9
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.9e-221 772.7 543 68.5
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.4e-221 772.3 544 68.2
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.6e-220 769.6 535 68.4
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 3.5e-220 768.5 539 67.7
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.3e-219 765.8 535 67.5
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 3.9e-219 765.0 530 67.9
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 5.1e-219 764.6 551 67.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 6.7e-219 764.2 554 66.2
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.1e-218 763.5 548 68.4
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.3e-218 761.5 539 67.2
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 7.4e-218 760.8 539 67.7
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 7.4e-218 760.8 548 68.1
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 4.8e-217 758.1 534 67.6
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 8.1e-217 757.3 544 66.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.1e-216 756.9 524 67.9
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 4.0e-216 755.0 512 70.1
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 6.9e-216 754.2 540 67.6
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.5e-215 753.1 529 67.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.9e-213 746.1 537 66.9
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 2.4e-213 745.7 524 66.4
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 2.4e-213 745.7 541 66.2
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 5.5e-213 744.6 550 65.3
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.2e-212 743.4 533 68.1
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.1e-212 742.7 524 66.2
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 2.7e-212 742.3 524 66.2
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 2.7e-212 742.3 524 66.6
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.3e-211 740.0 524 66.6
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.3e-211 740.0 524 66.6
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 2.3e-211 739.2 545 65.7
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 2.3e-211 739.2 534 66.3
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 9.6e-210 733.8 545 65.7
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 9.6e-210 733.8 614 60.4
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 3.7e-209 731.9 532 65.2
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.4e-208 729.9 537 66.1
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.8e-208 729.6 542 65.1
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 2.4e-208 729.2 545 65.5
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 2.4e-208 729.2 545 65.5
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 4.0e-208 728.4 535 66.2
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.0e-206 723.8 532 66.2
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.9e-205 719.5 531 66.3
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 4.3e-202 708.4 537 64.4
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.6e-201 706.4 534 64.0
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 2.8e-201 705.7 480 70.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.5e-199 699.9 537 62.9
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.0e-198 697.2 550 61.5
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 2.9e-198 695.7 546 61.5
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 9.7e-194 680.6 525 62.1
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 5.3e-192 674.9 544 59.6
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 9.4e-189 664.1 522 63.2
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.2e-188 663.7 552 59.4
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.1e-188 662.9 552 59.1
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 4.7e-188 661.8 549 60.5
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 2.0e-186 656.4 472 66.3
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 5.9e-183 644.8 545 61.1
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.2e-182 642.9 543 59.7
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.4e-179 633.6 462 64.7
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 5.2e-179 631.7 542 57.7
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.7e-174 616.7 532 57.1
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.5e-173 613.6 382 73.8
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.2e-172 610.5 542 56.3
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 4.7e-172 608.6 542 56.8
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 4.8e-169 598.6 537 57.2
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 4.1e-168 595.5 512 57.0
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 4.4e-162 575.5 453 62.5
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.3e-153 547.4 434 61.8
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 9.0e-115 418.3 408 51.2
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.7e-113 414.1 423 48.0
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 9.3e-112 408.3 488 44.5
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 1.2e-111 407.9 290 65.5
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 2.7e-111 406.8 435 47.1
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 3.2e-104 383.3 416 45.2
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 5.0e-73 279.6 173 75.1
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.1e-67 261.9 162 70.4
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 3.6e-47 193.7 149 62.4
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 2.0e-37 161.4 112 68.8
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.6e-34 151.8 122 61.5
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 1.1e-27 129.0 138 42.8
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 5.8e-21 106.7 82 56.1
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 7.3e-16 89.7 59 62.7
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 5.2e-14 83.6 73 53.4
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 5.2e-14 83.6 73 53.4
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 5.2e-14 83.6 73 53.4
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 1.1e-08 65.9 58 43.1
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 2.1e-07 61.6 75 36.0


User provided reference genes

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