Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0114800 Salix brachista HOM05D002620 ORTHO05D006469 6.4e-76 287.3 145 100.0
Potri.016G118700 Populus trichocarpa HOM05D002620 ORTHO05D006469 1.9e-56 222.6 142 83.1
Manes.09G107200 Manihot esculenta HOM05D002620 ORTHO05D006469 7.9e-18 94.4 154 43.5
CiPaw.09G211100 Carya illinoinensis HOM05D002620 ORTHO05D006469 1.0e-17 94.0 143 45.5
Cfa017186 Carpinus fangiana HOM05D002620 ORTHO05D006469 3.9e-17 92.0 144 44.4
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 5.1e-17 91.7 144 44.4
CANSAT35G0894 Cannabis sativa HOM05D002620 ORTHO05D006469 4.3e-16 88.6 153 41.8
QL04p017779 Quercus lobata HOM05D002620 ORTHO05D006469 1.6e-15 86.7 142 46.5
Eucgr.A00532 Eucalyptus grandis HOM05D002620 ORTHO05D006469 2.8e-15 85.9 149 46.3
Atru.chr8.2267 Acer truncatum HOM05D002620 ORTHO05D006469 1.1e-14 84.0 150 44.0
Ciclev10012213m.g Citrus clementina HOM05D002620 ORTHO05D006469 1.1e-14 84.0 153 39.9
Dinv01365 Davidia involucrata HOM05D002620 ORTHO05D006469 9.0e-14 80.9 154 40.9
Dinv03022 Davidia involucrata HOM05D002620 ORTHO05D006469 9.0e-14 80.9 155 41.3
AL3G19970 Arabidopsis lyrata HOM05D002620 ORTHO05D006469 5.9e-13 78.2 152 38.8
Lalb_Chr19g0124451 Lupinus albus HOM05D002620 ORTHO05D006469 5.9e-13 78.2 137 36.5
VMungo1383G1480 Vigna mungo HOM05D002620 ORTHO05D006469 1.0e-12 77.4 147 39.5
RcHm_v2.0_Chr7g0216861 Rosa chinensis HOM05D002620 ORTHO05D006469 2.9e-12 75.9 126 44.4
vmacro07605 Vaccinium macrocarpon HOM05D002620 ORTHO05D006469 6.5e-12 74.7 153 37.3
Prupe.6G279900 Prunus persica HOM05D002620 ORTHO05D006469 8.5e-12 74.3 142 40.1
TAR636G0672 Trochodendron aralioides HOM05D002620 ORTHO05D006469 8.5e-12 74.3 144 41.0
Duzib093G1276 Durio zibethinus HOM05D002620 ORTHO05D006469 1.1e-11 73.9 149 37.6
Glyma.18G203300 Glycine max HOM05D002620 ORTHO05D006469 1.1e-11 73.9 147 38.1
Glyma.07G152200 Glycine max HOM05D002620 ORTHO05D006469 2.5e-11 72.8 148 36.5
Sed0003396 Sechium edule HOM05D002620 ORTHO05D006469 2.5e-11 72.8 141 36.9
GSVIVG01011183001 Vitis vinifera HOM05D002620 ORTHO05D006469 2.5e-11 72.8 141 35.5
Phvul.008G096600 Phaseolus vulgaris HOM05D002620 ORTHO05D006469 3.2e-11 72.4 144 37.5
FAN28G0536 Fragaria x ananassa HOM05D002620 ORTHO05D006469 7.2e-11 71.2 123 42.3
Thecc.05G013300 Theobroma cacao HOM05D002620 ORTHO05D006469 9.4e-11 70.9 152 35.5
AT3G08950 Arabidopsis thaliana HOM05D002620 ORTHO05D006469 1.2e-10 70.5 154 39.0
FAN28G0365 Fragaria x ananassa HOM05D002620 ORTHO05D006469 1.2e-10 70.5 120 42.5
Gohir.D04G131800 Gossypium hirsutum HOM05D002620 ORTHO05D006469 1.2e-10 70.5 149 34.2
Gorai.012G115600 Gossypium raimondii HOM05D002620 ORTHO05D006469 1.2e-10 70.5 149 34.2
Ca_07656_v3 Cicer arietinum L. HOM05D002620 ORTHO05D006469 1.6e-10 70.1 145 36.6
ClCG04G006940 Citrullus lanatus HOM05D002620 ORTHO05D006469 2.7e-10 69.3 146 38.4
Aa31LG5G18910 Aethionema arabicum HOM05D002620 ORTHO05D006469 4.6e-10 68.6 150 38.7
CARHR083290 Cardamine hirsuta HOM05D002620 ORTHO05D006469 4.6e-10 68.6 156 35.3
Psat3g126840 Pisum sativum HOM05D002620 ORTHO05D006469 1.0e-09 67.4 145 35.9
TAR623G0172 Trochodendron aralioides HOM05D002620 ORTHO05D006469 1.0e-09 67.4 102 43.1
Aqoxy2G00103 Aquilegia oxysepala HOM05D002620 ORTHO05D006469 1.4e-09 67.0 97 43.3
Lsat_1_v5_gn_8_101621 Lactuca sativa HOM05D002620 ORTHO05D006469 1.8e-09 66.6 141 39.0
CSS0042358 Camellia sinensis var. sinensis HOM05D002620 ORTHO05D006469 2.3e-09 66.2 158 39.9
TWI77G0686 Tripterygium wilfordii HOM05D002620 ORTHO05D006469 2.3e-09 66.2 148 33.8
MD12G1171700 Malus domestica HOM05D002620 ORTHO05D006469 3.0e-09 65.9 147 39.5
HanXRQChr16g0508591 Helianthus annuus HOM05D002620 ORTHO05D006469 3.9e-09 65.5 139 36.7
Ah.12g058780 Amaranthus hybridus HOM05D002620 ORTHO05D006469 5.1e-09 65.1 126 36.5
ECA236G1932 Erigeron canadensis HOM05D002620 ORTHO05D006469 6.7e-09 64.7 145 35.9
Gohir.A04G092500 Gossypium hirsutum HOM05D002620 ORTHO05D006469 6.7e-09 64.7 149 36.9
Hma1.2p1_0362F.1_g136460 Hydrangea macrophylla HOM05D002620 ORTHO05D006469 6.7e-09 64.7 110 38.2
THA.LOC104827049 Tarenaya hassleriana HOM05D002620 ORTHO05D006469 6.7e-09 64.7 148 36.5
LjContig00408g0009428 Lotus japonicus HOM05D002620 ORTHO05D006469 8.8e-09 64.3 132 36.4
TPR.G2537 Trifolium pratense HOM05D002620 ORTHO05D006469 8.8e-09 64.3 144 34.0
A03p36260 Brassica napus HOM05D002620 ORTHO05D006469 1.5e-08 63.5 145 35.9
Carub.0003s0808 Capsella rubella HOM05D002620 ORTHO05D006469 1.5e-08 63.5 150 35.3
FAN26G2649 Fragaria x ananassa HOM05D002620 ORTHO05D006469 1.5e-08 63.5 125 38.4
FAN23G3025 Fragaria x ananassa HOM05D002620 ORTHO05D006469 2.5e-08 62.8 128 37.5
Cpa.g.sc11.86 Carica papaya HOM05D002620 ORTHO05D006469 4.3e-08 62.0 148 35.8
MD00G1061600 Malus domestica HOM05D002620 ORTHO05D006469 4.3e-08 62.0 149 36.9
Nn1g02057 Nelumbo nucifera HOM05D002620 ORTHO05D006469 4.3e-08 62.0 105 42.9
HanXRQChr06g0182221 Helianthus annuus HOM05D002620 ORTHO05D006469 5.7e-08 61.6 142 33.8
Lj1g0015893 Lotus japonicus HOM05D002620 ORTHO05D006469 7.4e-08 61.2 146 34.2
arahy.Tifrunner.gnm1.ann1.6AU7NA Arachis hypogaea HOM05D002620 ORTHO05D006469 9.7e-08 60.8 140 33.6
Thhalv10021214m.g Eutrema salsugineum HOM05D002620 ORTHO05D006469 9.7e-08 60.8 106 39.6
Hma1.2p1_0362F.1_g136450 Hydrangea macrophylla HOM05D002620 ORTHO05D006469 9.7e-08 60.8 108 37.0
arahy.Tifrunner.gnm1.ann1.0H8BAV Arachis hypogaea HOM05D002620 ORTHO05D006469 2.8e-07 59.3 146 35.6
MELO3C025997.2 Cucumis melo HOM05D002620 ORTHO05D006469 2.8e-07 59.3 146 34.2
FvH4_1g26950 Fragaria vesca HOM05D002620 ORTHO05D006469 2.8e-07 59.3 123 35.8
MSTRG.10211 Avicennia marina HOM05D002620 ORTHO05D006469 3.7e-07 58.9 90 41.1
BraA03t12797Z Brassica rapa HOM05D002620 ORTHO05D006469 3.7e-07 58.9 145 34.5
Oeu038760.2 Olea europaea HOM05D002620 ORTHO05D006469 6.3e-07 58.2 37 62.2
PGR004G1375 Punica granatum HOM05D002620 ORTHO05D006469 6.3e-07 58.2 165 32.7
CDE04G0754 Ceratophyllum demersum HOM05D002620 ORTHO05D006469 8.2e-07 57.8 88 35.2
SGA_v2.0_scaffold240G44084 Striga asiatica HOM05D002620 ORTHO05D006469 8.2e-07 57.8 37 59.5
Lj2A72T45 Lonicera japonica HOM05D002620 ORTHO05D006469 1.1e-06 57.4 94 41.5
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 1.4e-06 57.0 39 61.5
Sc22g0002540 Simmondsia chinensis HOM05D002620 ORTHO05D006469 1.4e-06 57.0 171 29.8
ATR0757G130 Amborella trichopoda HOM05D002620 ORTHO05D006469 1.8e-06 56.6 113 35.4
BolC3t16658H Brassica oleracea HOM05D002620 ORTHO05D006469 1.8e-06 56.6 83 39.8
CsaV3_4G026320 Cucumis sativus L. HOM05D002620 ORTHO05D006469 1.8e-06 56.6 146 32.2
Oeu028411.1 Olea europaea HOM05D002620 ORTHO05D006469 1.8e-06 56.6 37 59.5
SalBow4G1934 Salvia bowleyana HOM05D002620 ORTHO05D006469 2.4e-06 56.2 66 39.4
Sp3g07370 Schrenkiella parvula HOM05D002620 ORTHO05D006469 2.4e-06 56.2 150 33.3
CAN.G397.6 Capsicum annuum HOM05D002620 ORTHO05D006469 3.1e-06 55.8 148 30.4
FAN19G3002 Fragaria x ananassa HOM05D002620 ORTHO05D006469 3.1e-06 55.8 87 40.2
unitig_88.g27666 Utricularia gibba HOM05D002620 ORTHO05D006469 3.1e-06 55.8 88 39.8
C03p43900 Brassica napus HOM05D002620 ORTHO05D006469 4.1e-06 55.5 34 61.8
MBI08_g18760_MAGBIO Magnolia biondii HOM05D002620 ORTHO05D006469 4.1e-06 55.5 74 44.6
Cc10_g12170 Coffea canephora HOM05D002620 ORTHO05D006469 6.9e-06 54.7 161 31.1
Lj1g0002904 Lotus japonicus HOM05D002620 ORTHO05D006469 6.9e-06 54.7 41 53.7
Peaxi162Scf00890g00115 Petunia axillaris HOM05D002620 ORTHO05D006469 6.9e-06 54.7 37 54.1
AUR62030812 Chenopodium quinoa HOM05D002620 ORTHO05D006469 9.1e-06 54.3 65 41.5
HPP92_013561 Vanilla planifolia HOM05D002620 ORTHO05D006469 9.1e-06 54.3 66 43.9


User provided reference genes

Program Settings