Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 1.1e-240 836.3 423 100.0
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 9.2e-200 700.3 428 86.2
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 3.8e-89 332.8 423 49.2
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 6.4e-60 235.7 438 40.4
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 1.3e-57 228.0 422 39.6
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 3.9e-57 226.5 431 39.9
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 6.6e-57 225.7 436 38.5
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 4.3e-56 223.0 428 39.5
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 2.4e-54 217.2 439 36.0
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 9.9e-53 211.8 438 37.7
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.3e-52 211.5 424 38.7
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.1e-51 208.4 414 37.2
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.6e-50 203.0 438 37.0
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.3e-49 200.7 412 36.9
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 7.3e-48 195.7 434 37.1
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 2.1e-47 194.1 422 35.3
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.4e-46 190.7 429 37.3
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.0e-45 187.6 425 35.3
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.5e-45 186.4 425 35.5
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 7.6e-45 185.7 443 37.2
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.7e-44 184.5 471 34.4
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 2.2e-44 184.1 428 35.0
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 6.4e-44 182.6 427 34.9
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.6e-42 177.9 425 35.5
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.8e-41 174.5 438 34.0
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 2.5e-40 170.6 425 35.8
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 4.3e-40 169.9 438 35.2
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 2.4e-38 164.1 436 30.0
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 4.0e-38 163.3 422 35.3
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.4e-37 160.2 430 33.3
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.3e-36 158.3 419 31.5
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.8e-36 156.8 434 30.4
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 3.8e-36 156.8 436 33.5
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.1e-35 155.2 429 31.9
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.2e-35 153.7 419 31.3
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.2e-35 153.3 433 33.3
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 5.5e-35 152.9 425 32.7
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 7.1e-35 152.5 423 31.4
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 1.2e-34 151.8 428 32.2
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.1e-34 151.0 422 31.0
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 2.1e-34 151.0 437 32.5
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.7e-34 150.6 428 32.9
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 2.7e-34 150.6 440 33.6
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 7.9e-34 149.1 436 30.5
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 1.0e-33 148.7 435 33.3
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.3e-33 148.3 434 32.0
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 1.8e-33 147.9 385 35.1
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 2.3e-33 147.5 428 32.0
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.1e-33 146.4 440 30.5
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 6.7e-33 146.0 432 31.9
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 2.1e-31 141.0 431 28.3
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 8.2e-31 139.0 432 31.2
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 8.2e-31 139.0 440 29.1
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 1.4e-30 138.3 431 30.6
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 3.1e-30 137.1 435 31.5
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 9.0e-30 135.6 446 31.2
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 5.8e-29 132.9 418 31.1
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.9e-28 130.6 431 30.4
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.9e-27 127.9 340 35.6
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 1.9e-27 127.9 450 31.6
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 1.2e-26 125.2 436 28.9
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.0e-25 122.1 420 30.7
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 1.3e-25 121.7 428 30.6
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 1.3e-25 121.7 444 29.3
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 1.3e-25 121.7 426 27.7
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 5.1e-25 119.8 440 29.3
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 6.7e-25 119.4 415 28.9
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.5e-24 118.2 426 28.4
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.9e-24 117.9 445 29.2
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 4.3e-24 116.7 426 27.9
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 5.7e-24 116.3 445 25.6
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 1.6e-23 114.8 413 27.6
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.6e-23 114.8 426 27.9
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 2.2e-23 114.4 439 29.8
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 2.2e-23 114.4 423 27.0
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 2.8e-23 114.0 439 29.8
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 4.8e-23 113.2 416 30.8
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 1.8e-22 111.3 430 25.6
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 2.4e-22 110.9 433 28.4
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 2.4e-22 110.9 432 28.0
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 3.1e-22 110.5 423 29.6
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 6.9e-22 109.4 391 28.6
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.0e-21 107.8 421 27.6
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 3.4e-21 107.1 448 29.0
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 5.9e-21 106.3 430 27.4
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 7.7e-21 105.9 372 30.9
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.3e-20 105.1 435 28.0
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.9e-20 104.0 372 30.6
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 2.9e-20 104.0 131 45.8
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 6.5e-20 102.8 384 26.6
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 2.5e-19 100.9 429 24.5
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 3.2e-19 100.5 428 26.4
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 3.2e-19 100.5 435 26.4
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.2e-18 98.6 425 26.8
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 3.6e-18 97.1 409 26.7
BolC2t06018H Brassica oleracea HOM05D013727 ORTHO05D003520 6.1e-18 96.3 182 37.4
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 7.9e-18 95.9 423 27.2
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 7.9e-18 95.9 408 27.5
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 1.0e-17 95.5 437 28.4
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 1.0e-17 95.5 423 26.2
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 3.0e-17 94.0 422 25.1
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 3.9e-17 93.6 441 27.0
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 3.9e-17 93.6 301 28.6
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 6.7e-17 92.8 424 26.7
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 8.8e-17 92.4 216 34.7
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 1.5e-16 91.7 208 38.0
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 7.4e-16 89.4 322 27.0
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 7.4e-16 89.4 443 25.7
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 7.4e-16 89.4 440 25.2
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 9.7e-16 89.0 421 24.0
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 9.7e-16 89.0 199 37.2
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 1.3e-15 88.6 443 26.4
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 1.3e-15 88.6 206 35.9
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 1.3e-15 88.6 206 35.9
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.7e-15 88.2 437 27.9
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 1.7e-15 88.2 424 25.9
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 2.2e-15 87.8 430 24.7
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 2.8e-15 87.4 171 34.5
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.7e-15 87.0 166 36.1
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 8.2e-15 85.9 433 25.6
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 1.1e-14 85.5 445 24.9
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 1.1e-14 85.5 176 36.9
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 1.4e-14 85.1 295 31.9
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 1.4e-14 85.1 448 25.7
Carub.0006s0045 Capsella rubella HOM05D013727 ORTHO05D003520 2.4e-14 84.3 458 26.2
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 2.4e-14 84.3 438 27.9
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 2.4e-14 84.3 426 24.4
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 5.3e-14 83.2 434 25.1
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 9.1e-14 82.4 433 26.3
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 9.1e-14 82.4 387 27.9
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.0e-13 81.3 427 26.9
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 2.0e-13 81.3 429 24.7
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.6e-13 80.9 427 25.8
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 2.6e-13 80.9 434 24.7
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 5.9e-13 79.7 185 31.4
AL6G10750 Arabidopsis lyrata HOM05D013727 ORTHO05D003520 7.7e-13 79.3 455 25.9
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 7.7e-13 79.3 456 27.2
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 1.7e-12 78.2 154 35.1
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.7e-12 78.2 433 24.5
AT5G01370 Arabidopsis thaliana HOM05D013727 ORTHO05D003520 2.2e-12 77.8 458 26.6
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.8e-12 77.0 427 25.3
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 6.5e-12 76.3 158 32.3
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.1e-11 75.5 448 24.1
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.1e-11 75.5 429 24.0
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 1.9e-11 74.7 418 23.4
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 2.5e-11 74.3 406 25.6
Sp6g40680 Schrenkiella parvula HOM05D013727 ORTHO05D003520 3.2e-11 73.9 151 37.1
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 4.2e-11 73.6 422 22.5
BraA02t04692Z Brassica rapa HOM05D013727 ORTHO05D003520 5.5e-11 73.2 145 38.6
arahy.Tifrunner.gnm1.ann1.142K7L Arachis hypogaea HOM05D003726 ORTHO05D003520 7.2e-11 72.8 188 33.0
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 9.4e-11 72.4 447 24.8
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 9.4e-11 72.4 235 28.5
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 1.2e-10 72.0 416 25.0
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 1.6e-10 71.6 320 26.9
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.6e-10 71.6 435 26.0
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 3.6e-10 70.5 418 25.6
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 3.6e-10 70.5 427 25.3
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 7.9e-10 69.3 448 24.6
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.4e-09 68.6 417 22.8
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 1.8e-09 68.2 209 33.0
arahy.Tifrunner.gnm1.ann1.71KX3G Arachis hypogaea HOM05D003726 ORTHO05D003520 3.0e-09 67.4 390 24.6
CARHR211750 Cardamine hirsuta HOM05D013727 ORTHO05D003520 8.8e-09 65.9 462 24.9
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 1.5e-08 65.1 420 24.8
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 1.5e-08 65.1 420 24.8
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 1.5e-08 65.1 435 25.1
arahy.Tifrunner.gnm1.ann1.W084UE Arachis hypogaea HOM05D003726 ORTHO05D003520 2.0e-08 64.7 410 23.4
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 5.7e-08 63.2 421 24.7
BraA10t43670Z Brassica rapa HOM05D011448 ORTHO05D003520 9.7e-08 62.4 413 24.7
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 8.2e-07 59.3 304 27.6
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 1.1e-06 58.9 429 24.7
Actinidia20741 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.4e-06 58.5 244 28.3
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 1.4e-06 58.5 420 23.6
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 1.8e-06 58.2 428 24.8
TAR636G2889 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.8e-06 58.2 217 32.7
AT5G58630 Arabidopsis thaliana HOM05D011448 ORTHO05D003520 3.1e-06 57.4 412 23.3
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 5.3e-06 56.6 429 24.5


User provided reference genes

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