Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0105100 Salix brachista HOM05D016710 ORTHO05D015329 1.5e-147 526.2 263 100.0
Potri.016G106600 Populus trichocarpa HOM05D016710 ORTHO05D015329 4.2e-94 348.6 322 61.8
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 5.1e-39 165.6 292 37.0
QL11p001174 Quercus lobata HOM05D000576 ORTHO05D000368 4.9e-34 149.1 325 35.1
Rhsim13G0226200 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.5e-24 116.3 403 27.8
Manes.17G000300 Manihot esculenta HOM05D000576 ORTHO05D000368 5.8e-19 99.0 337 30.9
Potri.016G106650 Populus trichocarpa HOM05D016710 ORTHO05D015329 2.2e-18 97.1 101 53.5
Aqoxy6G01742 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.4e-17 94.4 177 37.9
Aqoxy6G01747 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.4e-17 94.4 177 37.9
Rhsim02G0051900 Rhododendron simsii HOM05D000576 ORTHO05D015329 1.4e-17 94.4 176 35.8
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.2e-16 91.3 285 30.2
Rhsim05G0090700 Rhododendron simsii HOM05D000576 ORTHO05D015329 3.5e-16 89.7 224 30.8
FvH4_6g01331 Fragaria vesca HOM05D000576 ORTHO05D012667 1.3e-15 87.8 276 30.4
AUR62033150 Chenopodium quinoa HOM05D000576 ORTHO05D000368 1.3e-13 81.3 297 28.6
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.3e-13 81.3 345 27.5
FAN14G2415 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.1e-13 80.5 277 29.6
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 4.8e-13 79.3 283 28.3
AUR62033154 Chenopodium quinoa HOM05D000576 ORTHO05D015329 6.2e-13 79.0 223 31.4
DCAR_023416 Daucus carota HOM05D000576 ORTHO05D000368 6.2e-13 79.0 306 26.8
Manes.10G002300 Manihot esculenta HOM05D000576 ORTHO05D000368 8.1e-13 78.6 273 30.8
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 1.4e-12 77.8 269 29.0
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 1.5e-11 74.3 269 28.6
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 9.9e-11 71.6 300 27.3
AUR62033151 Chenopodium quinoa HOM05D000576 ORTHO05D000368 1.3e-10 71.2 232 30.2
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.7e-10 70.9 294 27.2
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.9e-10 70.1 292 25.7
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.9e-10 69.3 283 29.3
Aqoxy5G04185 Aquilegia oxysepala HOM05D000015 ORTHO05D002445 6.4e-10 68.9 328 26.8
Lj1P336T14 Lonicera japonica HOM05D015521 ORTHO05D000368 1.9e-09 67.4 104 43.3
vmacro06519 Vaccinium macrocarpon HOM05D010825 ORTHO05D012667 1.9e-09 67.4 163 31.3
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.4e-09 67.0 298 27.2
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 4.2e-09 66.2 271 26.2
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.5e-09 65.9 267 28.8
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.2e-08 64.7 295 28.1
Cc05_g09460 Coffea canephora HOM05D009846 ORTHO05D000368 2.1e-08 63.9 271 26.6
Atru.chr4.3172 Acer truncatum HOM05D000576 ORTHO05D000368 2.7e-08 63.5 224 29.9
Potri.001G098901 Populus trichocarpa HOM05D016710 ORTHO05D015329 4.6e-08 62.8 164 31.7
Actinidia31191 Actinidia chinensis HOM05D000576 ORTHO05D000368 6.0e-08 62.4 208 30.3
Lj4P236T14 Lonicera japonica HOM05D015521 ORTHO05D000368 1.0e-07 61.6 153 30.7
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.3e-07 61.2 229 27.5
Sc08g0003540 Simmondsia chinensis HOM05D016710 ORTHO05D015329 1.8e-07 60.8 129 34.1
Atru.chr4.3173 Acer truncatum HOM05D000576 ORTHO05D000368 2.3e-07 60.5 224 29.0
GSVIVG01017697001 Vitis vinifera HOM05D000576 ORTHO05D000368 3.0e-07 60.1 228 27.2
COL.COLO4_13869 Corchorus olitorius HOM05D010825 ORTHO05D012667 5.1e-07 59.3 229 27.5
AUR62032904 Chenopodium quinoa HOM05D000576 ORTHO05D000368 6.7e-07 58.9 290 25.9
Aqoxy6G01741 Aquilegia oxysepala HOM05D016710 ORTHO05D015329 8.7e-07 58.5 138 31.2
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 1.5e-06 57.8 273 25.6
Aqoxy3G00472 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.9e-06 57.4 285 26.0
Aqoxy6G01746 Aquilegia oxysepala HOM05D016710 ORTHO05D015329 3.3e-06 56.6 137 30.7
COL.COLO4_38129 Corchorus olitorius HOM05D015521 ORTHO05D015329 3.3e-06 56.6 167 27.5
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.3e-06 56.6 231 28.1
Medtr8g468470 Medicago truncatula HOM05D000576 ORTHO05D000368 3.3e-06 56.6 175 26.9
TPR.G33251 Trifolium pratense HOM05D000576 ORTHO05D000368 4.3e-06 56.2 279 26.2
TWI63G0418 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.6e-06 55.8 207 28.0
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 7.4e-06 55.5 272 26.5
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 9.6e-06 55.1 220 28.6


User provided reference genes

Program Settings