Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 1.9e-147 525.8 260 100.0
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 2.0e-104 382.9 260 76.9
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 1.8e-73 280.0 205 69.3
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 1.5e-72 276.9 230 61.7
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.5e-72 276.9 205 67.8
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 1.0e-71 274.2 205 67.8
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 2.9e-71 272.7 260 57.3
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 5.0e-71 271.9 203 68.5
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 8.5e-71 271.2 238 60.1
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.1e-70 270.8 204 67.6
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 1.4e-70 270.4 204 66.2
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 1.9e-70 270.0 230 61.3
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 3.2e-70 269.2 204 67.2
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 5.5e-70 268.5 228 62.7
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 7.2e-70 268.1 228 61.0
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 1.6e-69 266.9 228 61.4
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 2.1e-69 266.5 228 61.8
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 4.6e-69 265.4 239 58.2
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 4.6e-69 265.4 228 61.8
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 7.9e-69 264.6 206 66.5
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 7.9e-69 264.6 214 63.1
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 1.3e-68 263.8 227 59.9
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.8e-68 263.5 273 55.7
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.8e-68 263.5 228 61.4
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.0e-68 262.7 206 66.5
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 3.9e-68 262.3 204 65.2
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 3.9e-68 262.3 203 65.0
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 6.7e-68 261.5 216 63.0
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 6.7e-68 261.5 216 63.0
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 8.7e-68 261.2 205 66.3
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 1.5e-67 260.4 237 59.5
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.5e-67 259.6 262 56.9
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 3.3e-67 259.2 263 55.1
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 3.3e-67 259.2 217 62.2
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 4.3e-67 258.8 214 62.1
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 4.3e-67 258.8 225 60.9
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 7.4e-67 258.1 204 61.8
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 9.7e-67 257.7 217 60.8
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 9.7e-67 257.7 255 55.3
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.3e-66 257.3 266 54.1
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 1.3e-66 257.3 229 60.3
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.7e-66 256.9 235 59.1
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 1.7e-66 256.9 204 64.7
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.7e-66 256.9 227 59.5
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 2.8e-66 256.1 142 85.9
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 2.8e-66 256.1 234 59.0
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 8.2e-66 254.6 204 62.7
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.8e-65 253.4 205 62.9
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.8e-65 253.4 228 57.9
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 3.1e-65 252.7 266 54.1
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 5.3e-65 251.9 205 63.9
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 5.3e-65 251.9 211 61.1
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 9.1e-65 251.1 231 57.6
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 9.1e-65 251.1 277 55.2
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 1.5e-64 250.4 205 61.5
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 1.5e-64 250.4 221 57.9
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 2.0e-64 250.0 215 58.6
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.0e-64 250.0 252 54.4
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 2.6e-64 249.6 228 59.6
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 7.7e-64 248.1 260 54.6
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 2.9e-63 246.1 229 56.3
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 6.5e-63 245.0 211 63.0
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 8.5e-63 244.6 263 53.2
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 8.5e-63 244.6 210 57.6
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 1.1e-62 244.2 250 52.0
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 7.2e-62 241.5 266 52.3
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 9.4e-62 241.1 230 54.8
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 3.6e-61 239.2 203 59.1
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 4.6e-61 238.8 204 61.3
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.6e-61 238.8 267 52.4
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.1e-61 238.4 206 59.7
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.4e-60 237.3 264 53.4
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.8e-60 236.9 266 51.9
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 8.8e-60 234.6 230 56.5
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 8.8e-60 234.6 161 71.4
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 2.6e-59 233.0 204 57.8
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 3.3e-59 232.6 224 55.8
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 7.4e-59 231.5 187 62.6
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 9.7e-59 231.1 201 63.7
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.7e-58 230.3 261 52.5
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.7e-58 229.2 266 50.8
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 9.1e-57 224.6 138 78.3
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 3.4e-56 222.6 257 46.7
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.9e-54 216.9 196 60.2
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 4.2e-54 215.7 180 61.1
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 2.1e-53 213.4 192 59.4
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 2.7e-53 213.0 299 43.8
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 1.4e-52 210.7 182 59.9
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 2.3e-52 209.9 179 58.7
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 2.2e-42 176.8 163 55.8
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 2.8e-42 176.4 163 55.2
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.8e-42 176.4 213 46.5
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 3.1e-41 172.9 162 54.9
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 7.7e-40 168.3 162 53.7
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 2.6e-35 153.3 233 37.3
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 9.1e-33 144.8 258 40.3
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.7e-31 140.6 77 87.0
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 1.6e-29 134.0 74 82.4
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.3e-15 87.8 94 44.7
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.8e-12 77.4 90 57.8


User provided reference genes

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