Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 9.0e-136 486.9 240 100.0
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 5.0e-126 454.5 240 94.6
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.2e-106 390.2 247 81.8
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 1.0e-102 377.1 241 78.8
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 9.5e-101 370.5 248 76.6
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.0e-99 367.1 242 77.3
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 1.0e-99 367.1 242 77.3
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 6.8e-99 364.4 248 75.0
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 8.8e-99 364.0 241 76.8
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.2e-98 363.6 240 77.5
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 3.4e-98 362.1 241 75.9
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 5.7e-98 361.3 241 75.5
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 9.8e-98 360.5 245 73.9
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 4.9e-97 358.2 242 76.9
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 3.1e-96 355.5 240 75.8
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.2e-95 353.6 245 74.7
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.0e-95 352.8 248 72.2
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 2.0e-95 352.8 244 75.0
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.0e-95 352.8 240 75.4
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 2.7e-95 352.4 261 70.1
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 4.5e-95 351.7 241 74.7
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 7.8e-95 350.9 240 73.3
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.7e-94 349.7 238 76.1
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 2.9e-94 349.0 242 74.0
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 5.0e-94 348.2 246 74.4
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 8.6e-94 347.4 243 74.1
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 8.6e-94 347.4 245 76.3
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 1.2e-92 343.6 245 71.8
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 2.8e-92 342.4 243 72.4
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.0e-91 340.5 243 73.3
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 4.0e-91 338.6 242 74.4
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 1.2e-90 337.0 240 71.2
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 7.5e-90 334.3 242 71.5
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.9e-89 332.4 241 72.2
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 3.7e-89 332.0 244 73.4
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 6.4e-89 331.3 241 72.6
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 6.4e-89 331.3 241 72.6
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 8.3e-89 330.9 242 71.9
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.1e-88 330.5 241 73.9
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 3.2e-88 328.9 253 69.2
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.1e-88 328.6 241 73.4
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.1e-88 328.6 241 73.4
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 5.4e-88 328.2 248 71.0
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.2e-87 327.0 290 62.8
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.0e-87 326.2 241 72.2
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.0e-87 326.2 271 64.9
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 2.7e-87 325.9 241 72.6
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 4.6e-87 325.1 241 69.7
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 1.7e-86 323.2 244 68.9
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.0e-86 322.4 245 68.6
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 3.0e-86 322.4 244 66.8
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 3.0e-86 322.4 241 67.6
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 8.6e-86 320.9 243 69.5
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 8.6e-86 320.9 243 69.5
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 8.6e-86 320.9 244 66.4
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 7.3e-85 317.8 217 74.7
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 2.8e-84 315.8 240 69.6
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 8.9e-83 310.8 251 66.1
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.2e-82 310.5 250 66.4
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 1.5e-82 310.1 248 66.1
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 1.5e-82 310.1 240 67.1
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 4.4e-82 308.5 252 67.9
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 4.4e-82 308.5 246 67.9
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 5.8e-82 308.1 247 64.8
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 9.8e-82 307.4 251 63.7
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.3e-81 307.0 246 65.0
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 2.2e-81 306.2 242 66.9
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 2.2e-81 306.2 244 66.8
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 2.9e-81 305.8 247 63.2
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 3.7e-81 305.4 240 66.7
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 3.7e-81 305.4 240 66.7
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 4.9e-81 305.1 240 65.4
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 4.9e-81 305.1 247 63.2
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 4.9e-81 305.1 244 63.1
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 6.4e-81 304.7 160 88.8
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 6.4e-81 304.7 241 67.6
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 2.4e-80 302.8 241 67.2
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 4.1e-80 302.0 257 62.6
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 4.1e-80 302.0 241 67.2
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 5.4e-80 301.6 247 64.8
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 2.7e-79 299.3 276 58.7
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 2.7e-79 299.3 243 64.2
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 3.5e-79 298.9 240 65.4
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 4.6e-79 298.5 188 76.1
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.3e-78 297.0 243 66.3
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 1.3e-78 297.0 284 58.8
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 2.3e-78 296.2 257 62.6
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.3e-77 292.4 246 64.6
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 3.6e-76 288.9 163 85.9
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.8e-75 286.6 246 60.6
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.0e-75 285.4 244 61.5
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.0e-75 285.4 244 61.5
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 4.9e-73 278.5 233 64.4
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.1e-72 277.3 246 58.1
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 3.5e-71 272.3 240 62.1
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 4.6e-71 271.9 255 59.2
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.9e-69 266.5 190 74.7
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 2.6e-66 256.1 240 59.6
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 1.7e-65 253.4 130 93.1
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 2.4e-64 249.6 169 74.0
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.7e-60 235.3 240 56.7
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 2.2e-57 226.5 196 60.7
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 2.2e-57 226.5 205 57.1
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 3.2e-56 222.6 110 95.5
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 5.4e-56 221.9 136 76.5
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 7.1e-56 221.5 179 60.9
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 1.3e-52 210.7 187 61.0
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 6.9e-51 204.9 131 74.0
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 7.6e-50 201.4 194 60.8
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 3.5e-47 192.6 153 67.3
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 2.1e-44 183.3 126 69.8
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 1.0e-38 164.5 90 84.4
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 3.8e-33 146.0 111 64.9
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 3.0e-30 136.3 91 70.3
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 6.3e-28 128.6 159 45.9
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 5.9e-26 122.1 114 61.4
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 2.7e-23 113.2 54 98.1
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 7.9e-23 111.7 96 53.1
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 5.9e-18 95.5 50 84.0
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 7.2e-16 88.6 56 75.0
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.9e-14 82.8 65 55.4
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-12 77.4 127 42.5
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 8.2e-12 75.1 38 78.9
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.3e-11 72.4 81 53.1
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 9.4e-08 61.6 31 87.1
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 6.7e-06 55.5 34 70.6


User provided reference genes

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