Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 8.6e-257 889.8 445 100.0
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 3.4e-104 382.9 315 67.3
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 7.4e-83 312.0 322 57.1
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 6.3e-82 308.9 321 56.4
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 1.4e-81 307.8 321 56.4
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 5.3e-81 305.8 321 56.4
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 3.4e-80 303.1 314 55.7
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 4.5e-80 302.8 321 55.8
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 5.9e-80 302.4 319 54.2
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 1.7e-79 300.8 312 55.1
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 1.7e-79 300.8 315 54.6
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 1.9e-78 297.4 345 52.5
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.9e-78 297.4 315 56.2
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 4.2e-78 296.2 320 53.4
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 5.5e-78 295.8 315 55.9
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 7.2e-78 295.4 319 54.9
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 9.4e-78 295.0 312 54.8
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 1.6e-77 294.3 322 55.0
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 1.6e-77 294.3 320 54.7
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 3.6e-77 293.1 317 54.3
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 7.9e-77 292.0 337 51.3
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 1.0e-76 291.6 324 52.5
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.0e-76 291.6 315 55.2
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 1.0e-76 291.6 319 53.3
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 1.4e-76 291.2 313 52.4
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.8e-76 290.8 319 53.6
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 1.8e-76 290.8 317 53.9
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 2.3e-76 290.4 318 54.7
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 3.0e-76 290.0 321 52.6
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 3.0e-76 290.0 276 58.3
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 3.9e-76 289.7 322 53.1
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 6.7e-76 288.9 290 55.9
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 8.8e-76 288.5 321 53.0
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 2.0e-75 287.3 324 52.8
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 3.3e-75 286.6 275 58.9
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 3.3e-75 286.6 291 55.3
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 4.3e-75 286.2 321 52.3
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 5.7e-75 285.8 329 51.7
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 7.4e-75 285.4 315 53.0
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 9.7e-75 285.0 308 53.9
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 1.3e-74 284.6 289 54.0
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 2.2e-74 283.9 319 52.4
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 2.8e-74 283.5 275 57.5
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 2.8e-74 283.5 323 54.2
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 2.8e-74 283.5 284 56.3
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 6.3e-74 282.3 323 51.7
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 1.4e-73 281.2 327 52.3
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 1.8e-73 280.8 323 53.6
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 3.1e-73 280.0 283 54.8
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 3.1e-73 280.0 312 52.9
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 4.1e-73 279.6 311 52.1
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 9.1e-73 278.5 315 52.1
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 2.0e-72 277.3 322 51.6
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 2.0e-72 277.3 327 49.2
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 1.3e-71 274.6 317 51.7
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 1.3e-71 274.6 311 52.1
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 1.3e-71 274.6 276 55.4
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 2.2e-71 273.9 250 60.4
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 1.9e-70 270.8 291 53.3
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 2.5e-70 270.4 278 54.3
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 2.5e-70 270.4 315 51.1
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 5.5e-70 269.2 276 54.7
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 1.6e-69 267.7 312 50.0
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 2.7e-69 266.9 306 52.0
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 2.7e-69 266.9 316 50.0
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 3.6e-69 266.5 307 51.8
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 3.6e-69 266.5 290 51.7
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 4.7e-69 266.2 316 47.5
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 4.7e-69 266.2 312 50.0
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 6.1e-69 265.8 267 55.8
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 6.1e-69 265.8 267 55.8
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 2.3e-68 263.8 340 48.5
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 3.0e-68 263.5 318 51.6
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 3.0e-68 263.5 305 49.2
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 3.9e-68 263.1 310 50.0
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 3.9e-68 263.1 321 50.2
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 5.1e-68 262.7 309 51.1
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 6.7e-68 262.3 323 48.3
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 8.8e-68 261.9 276 54.0
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 1.1e-67 261.5 269 54.6
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 7.4e-67 258.8 315 48.9
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 9.7e-67 258.5 245 57.1
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.7e-66 257.7 256 56.2
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 2.2e-66 257.3 316 50.3
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 2.2e-66 257.3 240 57.9
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.2e-66 257.3 345 45.8
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 6.3e-66 255.8 324 48.1
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 1.4e-65 254.6 286 53.5
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 4.1e-65 253.1 253 53.4
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 4.1e-65 253.1 243 56.0
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 2.5e-62 243.8 308 46.8
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 3.6e-61 240.0 276 48.9
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 1.1e-59 235.0 122 88.5
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 1.2e-56 224.9 261 49.8
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.6e-56 224.6 124 81.5
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 5.0e-55 219.5 292 45.2
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 1.6e-53 214.5 232 49.6
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 8.0e-53 212.2 144 69.4
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 4.5e-48 196.4 245 48.2
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 6.5e-47 192.6 120 68.3
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 7.2e-46 189.1 121 70.2
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 1.3e-42 178.3 115 76.5
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 1.3e-42 178.3 115 76.5
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 4.9e-42 176.4 94 85.1
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 8.3e-42 175.6 91 84.6
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 1.4e-41 174.9 118 66.1
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 7.7e-40 169.1 118 64.4
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 4.0e-36 156.8 283 39.2
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.9e-25 121.3 65 84.6
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 2.4e-17 94.4 117 54.7
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 3.2e-17 94.0 185 36.8
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 1.6e-16 91.7 109 36.7
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 1.0e-15 89.0 112 39.3
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 8.6e-15 85.9 56 66.1
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 2.5e-14 84.3 161 35.4
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.6e-13 81.6 141 42.6
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 1.5e-11 75.1 114 32.5
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 3.0e-07 60.8 106 28.3
Haze_20550 Corylus avellana HOM05D006544 ORTHO05D008757 5.1e-07 60.1 74 56.8
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 5.6e-06 56.6 159 30.2


User provided reference genes

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